Tateyamaria omphalii: BWR18_17735
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Entry
BWR18_17735 CDS
T04652
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tom
Tateyamaria omphalii
Pathway
tom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BWR18_17735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tom03019
]
BWR18_17735
03400 DNA repair and recombination proteins [BR:
tom03400
]
BWR18_17735
Enzymes [BR:
tom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BWR18_17735
Messenger RNA biogenesis [BR:
tom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BWR18_17735
DNA repair and recombination proteins [BR:
tom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BWR18_17735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
Rhodanese
HHH
Motif
Other DBs
NCBI-ProteinID:
APX13315
UniProt:
A0A1P8MYZ2
LinkDB
All DBs
Position
3536548..3538590
Genome browser
AA seq
680 aa
AA seq
DB search
MSGAATLLRDVFGFDGFRPGQEEIVDAVAAGENALAIMPTGGGKSLCFQLPALMRDGVTV
VISPLIALMRDQVRALQEAGVQAGALTSGNTPEETDAVWEALERRELKLLYIAPERLAAG
SSIGMLRRIGVNLIAVDEAHCVSQWGHDFRPDYLRIGELKRALDVPLAAFTATADAETQI
EIVQKLFDGAQPRTFLRGFDRPNIHLAFAAKNGPRAQILNFAAARKGQSGIVYCGTRAKT
ETLAQALREAGHAAIHYHGGMEADDRRIAERRFQQEDGLIVAATVAFGMGVDKPDIRWVA
HADLPKSIEAYYQEIGRAGRDGAPAETLTLFGPDDIKLRRTQIDEGLAPPERRMADHARL
NALLGLAEALECRRQTLLGYFGETEVSCGKCDLCDQPAEVFDGTTAVRKALSAMLRTDEW
FGAGHLIDILLGIETDKIRQRGHDSLPTYGVGKEYTKQQWQAVFRQMMGHDLVRPDPERY
GALRMTDAALPILRNEAKITLRRDTIKAAAARRPAVKAMVSEEDAPLLSALKAKRRALAE
AAKVPAYVIFPDRTLIEMAERRPANLDQMAQVSGVGAKKLEKFGRAFLEVINGEAEALHP
SRRKLAGHNAGTIYDQLLAVQAELARGQDGTDKPLSCSASQLAKIAQLRPDDDAGIERLL
GDRKAERFGPAFLDVLRAAS
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgctgccacgctgttgagggacgtattcgggttcgacggcttccgccccggg
caggaagagatcgttgacgccgtggctgcgggcgaaaacgcgctggccatcatgccgacg
ggtggcggtaaatccctttgttttcaattgcctgcgctgatgcgcgacggggtgacggtg
gtgatctctccgctgattgccctgatgcgcgatcaggtgcgcgccttgcaagaggcgggt
gtgcaggcgggtgcgttgacctctggcaacacgccggaagagacggacgcggtgtgggag
gcgctggagcggcgtgagctgaaactgctttacatcgcgccggagcggctggcggcgggg
tcctccatcgggatgttgcgccgcatcggtgtcaacctgattgctgtggacgaggcgcat
tgcgtgagccaatggggtcacgatttccgccctgattacctgcgtatcggtgagttaaag
cgcgccctggacgtgcccttggccgcctttaccgcaacggcagatgcggaaacgcagatt
gagattgtccagaagctgttcgatggggcgcagccgcggacgtttttgcgtgggtttgac
cggcccaacattcaccttgcctttgccgccaagaacgggccgcgcgcgcagatcctgaac
ttcgccgccgcgcgcaaggggcagtcgggcatcgtctattgcggcacacgggccaagaca
gaaacgctggcgcaggcgctgcgcgaggcggggcacgcggcgatccactatcacggcggg
atggaggcggacgaccgccgcatcgccgaacggcggtttcagcaggaagacggcctgatc
gtcgcggccacggtggcgttcggcatgggcgtggacaagccggatatccgctgggtcgcg
catgctgatctgcccaaatccattgaggcctactatcaggagattgggcgtgcggggcgt
gacggcgcgcctgcggagacgctgacactgtttggcccggacgacatcaaactgcggcgc
acgcagatcgacgaagggcttgccccgcccgaacggcgcatggcggatcacgcgcggctg
aacgcgcttttgggattggcggaggcgctggaatgtcggcgccagacgctgctggggtat
ttcggcgaaacagaggtgtcttgcggcaagtgcgatctgtgcgaccaaccggcggaggtg
tttgacggcacgacggcggtgcgcaaggcgctgtcggccatgctgcgcaccgacgagtgg
ttcggtgcggggcacctgatcgacattctgttgggcatcgagacggacaagatccgccag
cgcgggcatgacagcctgccgacctatggcgtgggcaaggaatacacaaaacagcagtgg
caggccgtgttccggcagatgatggggcacgatctggtgcgccccgaccccgagcgttat
ggcgcgctgcggatgacggatgcggccctgccaatcctgcggaatgaggccaagatcacc
ctgcgccgcgacacgatcaaggccgctgccgcccgccgcccggcggtcaaggcgatggtg
tctgaggaagatgcgccgctgctgtcggcgctcaaagccaagcgccgcgcgctggccgag
gccgccaaggtcccggcctacgtcatttttcccgatcgcacgctgatcgagatggcggaa
cggcgaccggccaatctggaccagatggcgcaggtcagcggggtcggggccaagaaactg
gaaaagtttggtcgtgccttccttgaagtgatcaatggagaggccgaggcgctccatccg
tcccgccgcaagctggcggggcacaatgcgggcacgatctatgaccagttgctggcggtg
caggcggaattggcgcgggggcaggatggcactgacaagccgctgagctgttccgcgtcc
caattggcaaagatcgcgcaactgcgcccggatgacgatgcgggcattgagcggctttta
ggtgaccgcaaggccgaacgatttgggcctgcctttctggacgtgctgcgggcggcatcc
tag
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