Thermodesulfobacterium geofontis: TOPB45_0477
Help
Entry
TOPB45_0477 CDS
T01547
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
top
Thermodesulfobacterium geofontis
Pathway
top00540
Lipopolysaccharide biosynthesis
top01100
Metabolic pathways
top01250
Biosynthesis of nucleotide sugars
Module
top_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
top00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
TOPB45_0477
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
top01005
]
TOPB45_0477
Enzymes [BR:
top01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
TOPB45_0477
Lipopolysaccharide biosynthesis proteins [BR:
top01005
]
Lipid A
TOPB45_0477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
AEH22580
UniProt:
F8C437
LinkDB
All DBs
Position
complement(480512..481306)
Genome browser
AA seq
264 aa
AA seq
DB search
MEKKFLIIAGPCVLEDFDTAFYIAQVLKDLVQKYDFDYVFKASFDKANRTSLFSYRGPGL
EKGLSWLEEIKGKAKVKITTDVHETWQVKPVSEVVDIIQIPAFLCRQTDLVVTASQTGKT
INIKKGQFMSPWDMKYVLQKAQAFNPQEVLLTERGYSFGYRNLVVDFRSIPIMKNFGVRV
IFDATHSVQLPGAGEGKSGGEREFVPYLIRAAVAVGADGIFMEVHPEPDKALCDGPNSLP
LAEVENILKQIKDLRSVVEKYGIS
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaaatttttaataattgctggtccttgtgtattagaagattttgatacagcc
ttctatattgctcaagtcttaaaagatttggttcaaaaatatgattttgattatgttttc
aaagcctcttttgataaagctaacaggacatctcttttctcttatagaggtcctggatta
gaaaaagggctttcttggttagaagagattaaggggaaagctaaagtaaaaattacaact
gatgttcatgaaacatggcaagtaaaacctgtttctgaggtggtagatattattcaaata
cctgcttttctctgtagacaaacagatctggtggtaactgcttctcaaacaggaaaaact
attaatatcaaaaaaggacaatttatgtctccttgggatatgaaatatgttttacaaaaa
gctcaagcttttaatcctcaagaagttcttcttactgaaagaggatattcctttggatat
agaaatttagtagttgattttagatccattccaattatgaaaaattttggagtgagggtt
atttttgatgccactcatagtgttcaattacctggagcaggggaaggaaaatctggagga
gaaagagaatttgtcccctatcttataagagcagcagttgcagtaggggctgatggaata
tttatggaggttcatccagaacctgataaggcactctgtgacggaccaaattctttacct
ttggcagaagttgaaaatattttaaaacaaataaaagatctaagaagtgtagtagaaaaa
tatggaatatcctga
DBGET
integrated database retrieval system