Thermodesulfobacterium geofontis: TOPB45_0835
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Entry
TOPB45_0835 CDS
T01547
Name
(GenBank) RNA binding S1 domain protein
KO
K02945
small subunit ribosomal protein S1
Organism
top
Thermodesulfobacterium geofontis
Pathway
top03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
top00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
TOPB45_0835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
top03011
]
TOPB45_0835
Ribosome [BR:
top03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
TOPB45_0835
Bacteria
TOPB45_0835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_2
Spt6_S1
RRP4_S1
Motif
Other DBs
NCBI-ProteinID:
AEH22933
UniProt:
F8C5F8
LinkDB
All DBs
Position
821571..823001
Genome browser
AA seq
476 aa
AA seq
DB search
MNDWIQELEKHFHESLKEVKPGSIISGKIIKISENFAFVDIGLKKEALLPIEEIRNKEGE
FILSEGDEIEALVIGKEPQEGFYILSFKKLREKKLWEELKEAYKERRPIEVKVLALNKGG
YEVEFDFLLKGFMPYSQAFFRDKPENLDSLIGKKIKVEILEIKNESFIVSRKKFLEKEYQ
RKKEFLINKIKAGKPIEGIVKKKVEGGFLIEIEEVLTGYLPYKELDWKRIDNPSEYFKIG
EKIKVKALNYDPVKEKLKLSIKALLPDPWGRVSQKYKEGDIVKGKITQIFDFGAFIELEP
GIEGFIPVKEITWNKKVKIDEILEKGDEVSALILEIKPSERKILLSLRKLQPDPWISASK
NYKLGEIVEGVIEKFLPNGLLIGLTPELTAFMPLKEFLKDLKVYKYKKELTEFEGFKVGD
KIKGKIINIDEEKRKIQISYLKYLEDLENKEIEDYKMQAKETTFITLGEIFKKKIN
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaacgactggattcaggaattagaaaagcattttcatgaaagtttaaaagaagtaaaa
cctggatctattatttcaggaaagataatcaaaatttctgaaaattttgcttttgttgat
ataggtttaaaaaaagaagctcttttacccatagaggaaataaggaataaggaaggagaa
tttattttgagtgaaggagatgaaatagaagctttagttattggaaaagaacctcaagaa
ggattttatattttatcttttaaaaaactaagagaaaaaaaattatgggaagaattaaaa
gaagcttacaaagaaaggagacccattgaagtaaaggttttggctttgaataagggcggt
tatgaagtagaatttgactttcttctaaagggctttatgccctattctcaagcctttttt
agagataaacccgaaaatttagactctttgattggaaaaaagataaaggttgaaatttta
gaaataaaaaacgaaagtttcattgtttcaagaaaaaaatttttagaaaaagaatatcaa
agaaaaaaagaatttctaattaataagattaaagctgggaagccaatagaagggatagta
aaaaagaaagtagagggtggatttttaattgaaatagaagaggttttaacaggttattta
ccttataaagaattagattggaaaagaattgataatccctctgagtattttaaaataggt
gaaaaaattaaagttaaggctttaaattacgatcctgtaaaagagaaattaaaattaagc
attaaagcccttcttcctgatccttggggaagggtttctcaaaaatataaagagggagat
attgtaaagggaaagattacccaaatttttgattttggagcctttatagaacttgagcca
ggaatagaaggatttattcctgtaaaagaaataacttggaataaaaaggttaaaattgat
gaaatacttgaaaaaggagatgaagtttctgctttaattttagaaataaagccttctgaa
agaaaaatattattaagtttaagaaagcttcaacctgatccttggatttctgcaagcaag
aactataaattaggagaaattgtagaaggagtaatagaaaagtttttacctaatggatta
ttaataggtttaactccagaacttacagcatttatgcctttaaaagagtttttaaaagat
ctaaaagtatataaatataaaaaagagcttacagaatttgagggctttaaagtgggagat
aaaataaaaggaaaaatcattaatattgatgaagaaaagagaaaaattcaaatttcctat
ttaaaatatttagaagatttggaaaataaagaaatagaagattataaaatgcaggctaaa
gaaactacttttataactttaggagaaatttttaagaaaaaaattaattaa
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