Thalassolituus oleivorans R6-15: R615_13410
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Entry
R615_13410 CDS
T03056
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
tor
Thalassolituus oleivorans R6-15
Pathway
tor00470
D-Amino acid metabolism
tor00550
Peptidoglycan biosynthesis
tor01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tor00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
R615_13410 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
R615_13410 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tor01011
]
R615_13410 (murD)
Enzymes [BR:
tor01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
R615_13410 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
tor01011
]
Precursor biosynthesis
Amino acid ligase
R615_13410 (murD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
AHK16536
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All DBs
Position
complement(2874868..2876220)
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AA seq
450 aa
AA seq
DB search
MSVLANANTKRLIVGLGLTGLSCARFCQKNGLAFDLCDTRESLPSLEDIRREFPNANIML
GALQGKVLAQYQVLLVSPGITIQQEAIQFAQQQGSLIAGDIQVFAETCQKPVIAITGSNG
KSTVTTLVAALLNAAGIRASAGGNLGIPALDLLANDEATDVYVLELSSFQLETTTDLQAR
VATILNISPDHMDRYAGMADYERAKQRIFQGAQSVVINRDDDHTRPLLEGRFSAVSFGLE
ESNSDFGVVQRSDGTSLTYQGEMIVRADELHIRGEHNVANALAALALVSVLGVQPAAVIT
ALKQFPGLAHRCQWVRNIKGVDYFNDSKGTNVGSTLAALKGLGRTINGRIWLLAGGEGKG
QDFSELAEFCQTYVAEVLVYGIDATRIVDGVDGACKTSQWQTIDEALNHARQHAQKNDVV
LLSPACASFDQFKNYVARGEYFVAQVEALQ
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttctggctaacgctaacactaaacgactgattgtaggccttgggcttactggg
ttgtcgtgcgcgcgtttctgtcagaaaaatggcttggcatttgatttgtgtgatacccgt
gaatcgttgcctagcttagaagacattcgccgagaatttcccaatgccaacattatgttg
ggcgcgttgcagggtaaggtacttgcccagtatcaagtcttattggttagtcctggtatt
accattcagcaagaagccattcaatttgcacaacagcaaggtagtttgattgctggtgat
atccaagtatttgctgaaacatgtcaaaagccagtgatcgcgattactggttctaatggt
aaaagtacagtgacaacactggttgccgcattactgaatgctgctggcattcgcgcaagt
gctggcggcaatttaggtattccggcattggacctgttggctaacgatgaggcaaccgat
gtttatgtattggagctttcaagcttccagctagaaaccactaccgacttacaagcacgt
gtcgcgacgattttaaatatttcaccggatcacatggatcgttatgccggaatggcagac
tacgaacgtgctaaacaacgcattttccaaggtgctcaatcggtcgtaattaatcgcgac
gacgaccacactcgaccactactagaaggtcgatttagcgcagtaagttttgggctagaa
gagagcaatagtgactttggtgtcgtgcagcgcagtgatggtacttcgttaacttatcag
ggtgaaatgattgtacgtgccgacgagttgcatattcgcggtgagcataatgtcgctaat
gctttagctgcgttggcgttggtttctgtattgggtgttcagccggcagcggttattacg
gcgctcaaacaatttcctgggttagcacatcgatgtcagtgggttcgtaatattaagggc
gttgattattttaacgattctaaaggaaccaatgttggttctactcttgctgctttaaaa
ggtctcgggcgcaccatcaatggtcgtatttggttattggctggcggcgaaggaaaaggt
caagatttctctgagctggctgagttttgccaaacctacgttgctgaagtgttggtttat
ggcatagatgcaactcgtatagtcgacggtgttgatggcgcgtgcaaaacgtctcaatgg
caaacaattgatgaggcgttaaatcatgcgcgtcagcatgcgcagaaaaatgatgttgtg
ttgttgtcaccggcttgtgcaagttttgatcaattcaaaaactacgttgcgcgcggtgaa
tattttgtcgcacaggtggaggcattacaatga
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