Theileria orientalis: TOT_040000937
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Entry
TOT_040000937 CDS
T03460
Name
(RefSeq) DNA-directed RNA polymerase III largest subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
tot
Theileria orientalis
Pathway
tot03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tot00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TOT_040000937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tot03021
]
TOT_040000937
Enzymes [BR:
tot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TOT_040000937
Transcription machinery [BR:
tot03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
TOT_040000937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
20716957
NCBI-ProteinID:
XP_009692204
UniProt:
J4C946
LinkDB
All DBs
Position
4:complement(join(610533..610865,611010..611339,611456..612567,612729..612954,613137..614851,614950..615133,615165..615248,615361..615483,615521..615699,615808..616053,616113..616512))
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AA seq
1643 aa
AA seq
DB search
MEGNKRQKTRKADVAPVKRESEQSSSSTSPSDQIIVQRRGELNGYSNGLKLEQEKKGLVP
KSSLSFLESVPGQSQRKEYVKPTVTKYTIEGVQFDIMGSTEISRAAEIEIKNRDLYYYLT
NKPYPYGVLDSRLGLKLIWNLGCNTNDMTCETCGKGLIECIGHWGYVKLELPVFHVGFFK
YVIQVLYCICKKCSCLLLPEDSIRKLKEQFFKRPIEDPVVKSLIFRSVLDMCRKVKFCPR
CEAPQGSIKKVVKPTTDQFMKLKHCIKQKGSSRVEVEELTPLVVKQLFENIDPIHCKVMN
IENPERLIITSLAAPPNCIRPTISIQGQGTTEDDLTVDFSDIVDINNLLKNQIKNGLQTN
RFIGNWQILQVQCTRFINSEYPGLNHLLTSRNITKPGRGLCERLKGKEGRFRGNLSGKRV
DFSARTVISPDPNVGIDEVVIPEWIARRLTFPERVSSYNIEVMKKAILNGESVWPGASYV
HKLDGSKCSLRFANPKHVSENIQVGDIVERHLWNGDLVIFNRQPSLHRLSIMCHRARIMR
GSTFRFNECVCTPYNADFDGDEMNIHLPQTYEAKAESLHLLSVQKNLTTPRNGEPLIAPV
QDFLCSSYLLTNKDMFLTRAQFCQIISYFTDASIHVDLPPPSIVHPVTLWTGKQAFNVLI
RPNRASKVMVNLRVKEREFMDPNVYYKSGGKGARGMGDNRTKRRGPEDMDLDEEEDEQNS
RESWGAAVKLDECMCPHDGYVVIYKSELLSGSLGVRSLGPTKGGLFYELMLKNSAKVSSE
CMLRVSKLSSRWLSEYGMTIGLDDVTPSEELINKKKQLLLDGYLRVDEAISNFEFLQPYP
GCTREETLELQVKSILDELRNESGKICTSLLSPDNKPLIMFNSGSKGALINIAQMVACVG
QQNVSGQRIQNGFIERTLPHFPMGCKDAKSRGFVANSFFTGLEPEEFFFHTMSGREGLID
TAVKTSETGYMQRRLMKFMEDLAICYDHSVRTGDGQVVQFLYGDDGLTSALSKSSQTTLK
SSFDHIKHINPILEKVVMSSVHIDPAAVNTNQKVVKRRTKSTRSGSKTSGKESEDGYRHR
WILPSEKTSEIGSKIDILLQNEDFIDNLPPQLKNKVKSYKYWIQGNNPGHKEVRFDVNVK
LESGEYNIRENQINKSIDESTINTVKSHLVAYHAVYVENSYTNRNVPLLPNEIKAWSKYL
QPLLIELLPPTICNNSTSQCMGSVYEFGNLIERTLEEHAEKLEQTLSEDYEKEFLSSKNE
SEGVVRRFKRIDKVHWLSLEQVFEFIRYTWKHYQKCICEPGEAIGALGAQSIGEPATQMT
LKTFHFAGVASMNVTLGVPRIKEIIGASAKIATPIIEVPLEEKTNYDFALKVKSRIEKTT
LGQVCTSVKQMYTPQSSKLLLTLNQKLINQLYLPINANKVRTRVVEIISQIKKIGKIVIP
KSSVYAVGEWQICMDLGPTHHQFFQQNTLVTSILQLVVAGCKEVKRAVIKRENTAAGPNY
QIAVEGYGLKEVMGADGVLWSSVKSNHVFEVAEVLGIEAARSVIISEIQKCMDAYSIDID
GRYMKLLADVMTFKGQVIGINRHGIRKMRSSTLMLSSFEQTNDHLFDAAVHHRKDPIKGV
SECIIMGKPISLGTGSFDIMMAA
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atggaagggaataagaggcagaagacgaggaaggccgacgtggcgccagtgaagagagaa
tcggagcaatcttcaagctccacgagcccttcagaccaaattattgtgcaaagaagagga
gaactgaacggatacagtaacgggctcaagctcgagcaggaaaagaagggcttggtgccg
aaatcgtcactatcgttcctggaatccgtaccaggtcaatcgcagagaaaggagtacgtg
aagccgacggtcaccaagtacacgatcgaaggtgtgcagttcgacatcatgggaagcacg
gagatatcgagagcggcggagatagaaataaagaacagagatctgtactactacttgacg
aacaagccgtacccgtacggagttctggacagtagactagggctaaaactaatttggaac
ttagggtgtaacacgaatgacatgacgtgcgagacgtgcggaaagggactgatagaatgc
ataggccattggggctacgtgaagctggagctgccagtattccacgtaggattcttcaag
tacgtgatacaggtgctctactgcatatgtaagaagtgctcgtgcctcctgctgccagaa
gactcgatcaggaagctgaaggagcagttttttaaaagaccaatagaggacccggtggtg
aagtcgctaatatttcggagcgtgctggacatgtgcagaaaagtaaagttctgtccaagg
tgtgaagcgccgcagggctcgataaagaaggtggtgaagccgacgacggaccagttcatg
aagctgaagcactgcataaagcaaaagggctcctcgagagtggaggtggaggagctgacg
cccctggtggtgaagcagctgttcgaaaacatagatccaatacactgcaaggtgatgaac
atagagaacccggagaggctgatcataacgtcactggcggcgccaccaaactgcatcaga
ccgacgatatcaatacaagggcagggtacgaccgaggatgaccttacagtggacttttca
gacatcgtagacatcaacaacctcctgaaaaatcaaattaaaaacggacttcaaacgaac
agatttatcggaaactggcaaatattgcaagtgcagtgcacaaggttcataaactcagag
tacccaggactcaatcacctgctaacatcaaggaacataacaaagccaggaagaggactg
tgcgaaagactgaagggaaaggagggaaggttcagagggaatttgtcgggaaagagagtg
gacttctcagcaaggacggtgatatcgccggacccaaacgtgggcatagacgaagtggtg
ataccggagtggatagcgaggaggctgaccttcccggagagagtgagcagctacaacatc
gaggtgatgaagaaggcgatactgaacggagagtcggtctggccaggagcgtcctacgtg
cacaagctcgacggaagcaagtgcagcctgaggttcgcaaacccgaagcacgtctcggag
aacatacaggtgggcgacatagtggagaggcacctgtggaacggagacctggtgatattc
aacaggcagccctcgctgcacagactgagcatcatgtgccacagggcgcgaatcatgcga
ggctcgaccttcaggttcaacgagtgcgtgtgcacgccgtacaacgcagacttcgacgga
gacgagatgaacatacacctgccgcagacgtacgaggcgaaggcggagtcgctgcacctg
ctgagcgtgcagaagaacctgacgacgccgaggaacggagagccgctgatcgcaccagtg
caggacttcctgtgctcctcgtacctgctgacgaacaaggacatgttcctgacgagagcg
cagttctgccagatcatatcctacttcacggacgcctcaatacacgtggacctgccgccg
ccatcaatagtgcacccagtgacgctgtggacggggaagcaggcgttcaacgtgttgata
agaccgaacagagcgtcgaaggtgatggttaacctgcgagtgaaagagagagagtttatg
gacccgaacgtgtactacaagagtggtggcaaaggcgcaagaggaatgggcgataacagg
acaaagcgtagagggccagaagacatggacctggacgaggaggaggatgagcagaattca
cgggaaagttggggagctgccgtaaagttggacgaatgcatgtgtccgcacgacggatac
gtggtgatctacaagtcggagctgctgagcggaagcctgggagtgaggtcgctggggccg
acaaagggagggctcttctacgagcttatgctgaagaacagcgcgaaggtgtcctcggag
tgcatgctgcgagtgagtaagctctcgagcagatggctctcagagtacggaatgacaata
ggcctcgacgacgtgacgccgagcgaggagctgatcaacaagaagaagcagctgctgctc
gacgggtacctgagggtcgacgaggcgatcagcaacttcgagttcctgcagccgtacccg
ggctgcacgcgcgaggagacgctggagctgcaggtgaagtcgatcctggacgagctgagg
aacgagtcgggcaaaatctgcacgtcgctgctgagtccggacaacaagccgctgatcatg
ttcaactcgggctcgaagggggcgctgatcaacatagcgcagatggtggcctgcgtgggc
cagcagaacgtgtcaggccagcgaatacagaacggcttcatcgagaggacgctcccgcac
ttcccgatgggctgcaaggacgcgaagagcagaggcttcgtggcaaactccttcttcacg
gggctggagccggaggagttcttcttccacaccatgtcagggagggaggggctgatcgac
acggcggtgaagacgtcggagacgggctatatgcagaggagactgatgaagttcatggag
gacttggcgatatgctacgaccacagcgttagaaccggcgacgggcaggtggtacagttt
ctatacggagatgatggactcacatcagcgctctcgaagtcatcgcaaaccacactcaaa
agctcatttgatcacataaaacacataaacccgatcctggagaaggtggtgatgtcatca
gtacacatagatccagccgcggtgaacactaatcaaaaagtggttaaaaggaggacgaaa
agtacaagaagtgggtcaaagacaagtggaaaggaaagtgaagacggatacagacataga
tggatactgccatcagaaaaaacgagtgaaattgggtcaaaaatagacattttattacaa
aacgaagattttattgacaatttaccacctcaactaaaaaataaagttaaatcatataaa
tattggatacaagggaataatccagggcataaagaagtaaggtttgatgtgaatgtaaag
ttggagagtggagagtacaacataagggagaatcaaataaacaagtcgatagacgagagc
acaattaacacagtgaagagtcacctggtggcataccacgcagtgtacgtggaaaacagt
tacacgaataggaacgtgccgctgctgccaaatgaaataaaagcatggtcaaagtatctg
cagccgttgctgatagagttgttgccgccgacaatatgtaataactcaacttcgcagtgc
atgggaagcgtgtacgagttcgggaacctgatagaaaggacgctggaggaacacgcggaa
aagttggaacagacgctgagcgaagactacgaaaaggagtttttgagttcgaaaaacgag
tcggaaggagtggtgaggaggtttaagaggatagacaaggtgcactggctgtcgctggag
caggtcttcgagttcataaggtacacgtggaagcactaccagaagtgcatctgcgagccc
ggagaggcgataggagcgctcggcgcgcagtcgataggagagccggcaacgcagatgacg
ctgaagacgttccacttcgcaggagttgcctcaatgaacgtgacgctgggagtgcccaga
atcaaggagatcatcggcgcctcggcgaagatagcgacgcccataatagaagtgccgctg
gaagaaaaaaccaactacgacttcgcgctcaaggttaagtctaggatagagaagacgacg
ctgggccaggtgtgcacgagcgtgaagcagatgtacacgccgcagagcagcaagctgctg
ctgacgctgaaccagaagctgatcaatcagctgtacctgccaataaacgcaaacaaggtg
agaacccgtgtcgtggagatcataagtcagataaagaagataggcaagatcgtgataccg
aagagcagcgtctacgcggtgggcgagtggcagatatgcatggacctagggcccacgcac
caccagttcttccagcagaacacgctggtgacctcaatactgcagctggtggtggcgggg
tgcaaggaggtcaagagggcggtgataaagagggagaacacggcggcagggcccaactac
caaatagcagtcgagggctacggcctgaaggaggttatgggagcggacggagtgctgtgg
agctcagtgaaaagcaaccacgtgttcgaagtggcagaggtgctcggaattgaagctgcg
cgcagcgtaataatcagtgagatacagaagtgcatggacgcgtactcgatagacatagac
ggaaggtacatgaagctcttggcggacgtgatgaccttcaagggccaggtcataggaatc
aaccggcacggcataaggaaaatgaggtcctcgacgctgatgctctcctccttcgagcag
acgaacgaccacctgttcgacgcggcagtgcatcacagaaaggacccaatcaagggagtg
tccgagtgcataatcatgggaaagccaatatcgctgggaacgggctcttttgacataatg
atggccgcatga
DBGET
integrated database retrieval system
