KEGG   Tomitella fengzijianii: FO059_10055
Entry
FO059_10055       CDS       T06118                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
toy  Tomitella fengzijianii
Brite
KEGG Orthology (KO) [BR:toy00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    FO059_10055
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:toy03021]
    FO059_10055
Transcription machinery [BR:toy03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     FO059_10055
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HC2 SARG
Other DBs
NCBI-ProteinID: QDQ97604
UniProt: A0A516X3H6
LinkDB
Position
2213183..2214478
AA seq 431 aa
MVATDTRPTPDGSTESSAPSDADAAPVKKAAAKKPAAKKTAAKKAPAKKAAKKAPAKKAA
AKKAGAKATGPEGAAPEAEDIDPAEIPVNDEPEEPSEKDKASGDFVWDEDESEALRQARK
DAELTASADSVRAYLKQIGKVALLNAEQEVELAKRIEAGLFSNHKLGEYKERGERPTVAV
RRDLMWITRDGNRAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDY
TKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPE
ELAKEMDITPEKVLEIQQYAREPISLDQTIGDEGDSQLGDFIEDSEAIVAVDAVSFTLLQ
DQLRSVLETLSEREAGVVRLRFGLTDGQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHP
SRSQVLRDYLD
NT seq 1296 nt   +upstreamnt  +downstreamnt
gtggtagccaccgatacccgtcccacacccgacggctctacggagtcctcggcaccgtcc
gacgccgacgccgcaccagtcaagaaggccgccgccaagaagccggcggcgaagaagacc
gccgccaagaaggctccggccaagaaggccgcgaagaaggctcctgcgaagaaggccgcc
gccaagaaggccggcgccaaggccaccggcccggagggcgccgcgcccgaagccgaggac
atcgacccggccgagatccccgtgaacgacgagcccgaggagccctccgagaaggacaag
gcgtccggcgacttcgtctgggacgaggacgagtcggaagcgctccgccaggcccgcaag
gacgcggagctcacggcctccgccgactcggtgcgcgcgtacctcaagcagatcggcaag
gtggcgctgctcaatgcggagcaggaggtggagctggccaagcgcatcgaggccgggctg
ttctccaaccacaagctcggcgagtacaaggaacgcggcgagcgccccaccgtcgccgtg
cgccgcgacctgatgtggatcacccgcgacggcaaccgcgcgaagaaccacctgctcgag
gccaacctgcgcctggtcgtctccctggccaagcgctacaccggccgcggcatggcgttc
ctggaccttatccaggagggcaacctgggcctgatccgcgccgtcgagaagttcgactac
accaagggctacaagttctccacctacgccacgtggtggatccgccaggccatcacccgc
gccatggcagaccaggcccgcaccatccgcatccccgtgcacatggtggaggtcatcaac
aagctcggccgcatccagcgcgagctcctccaggacctgggccgcgagcccacgccggag
gaactggccaaagagatggacatcacccccgagaaggtcctcgagatccagcagtacgcc
cgcgagccgatctcgctcgaccagacgatcggcgacgaaggcgatagccagctcggcgat
ttcatcgaggattccgaggccatcgtggccgtggacgccgtctcgttcaccctcctgcag
gaccagctgcgctcggtgctcgagacgctctccgagcgcgaggcgggcgtcgtgcggctg
cgcttcggcctcaccgacgggcagcctcggacgctcgacgagatcgggcaggtctacggg
gtcacccgcgagcggatccgccagatcgagtccaagacgatgtccaagctccgccacccg
tcgcgctcacaggttctgcgcgactatctcgactga

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