Treponema pallidum subsp. pallidum Nichols: TP_0588
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Entry
TP_0588 CDS
T00016
Name
(GenBank) conserved hypothetical protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
tpa
Treponema pallidum subsp. pallidum Nichols
Pathway
tpa03030
DNA replication
tpa03430
Mismatch repair
tpa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TP_0588
03430 Mismatch repair
TP_0588
03440 Homologous recombination
TP_0588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpa03032
]
TP_0588
03400 DNA repair and recombination proteins [BR:
tpa03400
]
TP_0588
Enzymes [BR:
tpa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TP_0588
DNA replication proteins [BR:
tpa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TP_0588
DNA repair and recombination proteins [BR:
tpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TP_0588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DUF4406
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
AAC65563
UniProt:
O83597
LinkDB
All DBs
Position
complement(639853..640617)
Genome browser
AA seq
254 aa
AA seq
DB search
MSVWLFTGPEIGERDSAVQEVCARAQAQGTVDVHRLYAHETPVADLVDLLRTRALFADAV
CVVLYNAEVIKKCDEVHVLTEWIKDGGSRADVFLVLISDSVSIHKRIEQNISPVHKRVFW
ELFENKKHAWVQRFFFQHEMRIEQEAIESLLELVENNTRALKTVCTQLSLFFEKGRRITA
HDISSLLVHTKEETSFTLFDALSKRDLEHSLMILNTLLCSKDVAPVQILAGLLTRSVALR
IGTIYRRTKRTLQR
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtctggctttttaccggacctgaaataggggagcgagatagtgcagttcaggag
gtgtgcgcgcgtgcacaagcgcaagggacggtggacgtacatcggctctatgcacacgaa
acgcctgtggcagatcttgtagatctcctgagaactcgtgcgctgtttgcagatgcagtc
tgcgtggtactgtacaacgcagaggttattaagaagtgtgacgaagtgcacgtgcttaca
gaatggataaaggatggcggctcgcgcgctgacgtgtttttggtactgatttccgatagt
gtcagtatacataagcgtatagaacagaatatttctcccgtgcataagcgtgttttttgg
gagttgtttgaaaataaaaaacacgcgtgggtgcagcgatttttttttcagcatgaaatg
cgcattgaacaggaggctatcgaatctcttcttgagttggtggagaacaacactcgtgcg
ctcaaaactgtttgtacgcagctttctcttttttttgaaaaaggacgccgcatcactgcg
cacgacattagttcgttgctggtgcacacaaaagaagagacatcgtttaccttattcgat
gcgctgtccaaacgagatcttgagcattcacttatgattctcaacacgctgctttgttcg
aaagacgttgcccctgtacaaatccttgcaggactgcttacgcgttccgtcgccttgcgc
attggcaccatataccggaggacaaaacgcaccctgcaacgctaa
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integrated database retrieval system
