KEGG   Thermococcus pacificus: A3L08_04035Help
Entry
A3L08_04035       CDS       T05192                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K07468  putative ATP-dependent DNA ligase [EC:6.5.1.1]
Organism
tpaf  Thermococcus pacificus
Brite
Enzymes [BR:tpaf01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     A3L08_04035
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: RNA_ligase DNA_ligase_A_M
Motif
Other DBs
NCBI-ProteinID: ASJ06555
UniProt: A0A218P6Z3
LinkDB All DBs
Position
726065..727207
Genome map
AA seq 380 aa AA seqDB search
MVSSHFMSLLLKIGVPEDRLLVLEGKGGIVEDEFEGIRYVRFRDSAKGFRRGTVVFENGE
AVLGFPHIKRVVQLENGVKRVFKSRPFYVEEKVDGYNVRVVKVEDRVLALTRGGFVCPFT
TERIEDFVNFEFFKDYPNLVLAGEMAGPESPYIVEGPPYVKEDIEFFLFDIQEKGTGKSL
PVEERYKLAEEYGIPQVERFGLFDRSRLDELYDLIERLGREKREGIVMKSPDMRKIAKYV
TPYANINDIKIGSHIFFDLPHGYFMGRIERLAFYLAEKHVKGEEFDEYAKALGKALLRSF
VESIHEVANGGEVEETFTVRVKNISTAHRMVTHFERLGVNIHIEDIEDLKNGYWRITFKR
VYPDATREIKELWNGLAFVD
NT seq 1143 nt NT seq  +upstreamnt  +downstreamnt
atggtaagctctcacttcatgagcctactccttaagatcggcgttcccgaggacaggctt
ctcgttctagagggtaagggaggcatcgttgaggacgagtttgagggcatcaggtacgtc
cgcttccgcgattccgccaagggcttccgcagaggcacggtagtttttgagaacggcgag
gcagtcctcggctttccccacataaagcgcgtcgtccagcttgagaacggggtaaagcgg
gtcttcaaaagcaggccgttctacgtcgaggagaaggtggatggctataacgtccgcgtc
gttaaggttgaggacagggttctcgccctcacccgcggcggcttcgtctgccccttcacc
accgagagaatagaggacttcgtgaacttcgagttctttaaggactatcccaaccttgtc
ctggctggggagatggccgggcccgagagcccttacatagtcgaggggccgccctacgtg
aaggaggatatagagttcttcctcttcgacatccaggagaagggaaccggaaagagcctg
ccagttgaagagcgctataaactcgcggaggagtacgggattccacaggttgagcgcttc
ggcctctttgaccgctcccgcctggatgagctctacgacctgatagagaggctcggtagg
gagaagagggaaggcatcgtcatgaagagcccggacatgaggaagatagcgaagtacgtg
acgccatacgccaacatcaacgacataaagataggctcgcacatattcttcgacctcccc
cacggctacttcatggggaggatagagaggctcgccttctacctcgccgagaagcacgtc
aagggagaggagttcgacgagtatgccaaagccctcggaaaggccctgctgaggtccttc
gtcgagagcatccacgaagttgccaacggcggagaggtcgaggagaccttcactgtgcgg
gtcaagaacataagcaccgcccacagaatggtcacccacttcgagaggctgggcgtgaat
attcacatcgaggacatcgaggatttgaagaacggctactggaggataacctttaagcgc
gtttacccagacgcgacgagggagataaaagagctgtggaacgggctggcatttgtggac
tga

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