Treponema pallidum subsp. pertenue CDC2: TPECDC2_0627
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Entry
TPECDC2_0627 CDS
T01749
Symbol
sbcC
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tpc
Treponema pallidum subsp. pertenue CDC2
Brite
KEGG Orthology (KO) [BR:
tpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpc03400
]
TPECDC2_0627 (sbcC)
DNA repair and recombination proteins [BR:
tpc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TPECDC2_0627 (sbcC)
Archaeal homologous recombinant proteins
TPECDC2_0627 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_29
SbcC_Walker_B
SMC_N
AAA_27
AAA_21
ABC_tran
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AEZ58820
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All DBs
Position
684213..687356
Genome browser
AA seq
1047 aa
AA seq
DB search
MKPMRLTLHNIGPFVGTHTVDFTALGPIFLVCGKTGSGKTTLFDAIAYALYGKPLGTRAE
VIRSLRSHYAAPSEAAFATLEFSLGTKIYRVHRTLTCTLSHRKTEQPEQLYLEQKKGHGW
ERIACAHKSETECVIHDLLKLNSKEFERVVMLPQGECAQFLKANSKEKKETLMNLFPVDQ
YTALMERAKKKSLHAKAVLETLRSQLETLCAECMPDTYHERKQTLEAELQHARDALQQTR
ISHAYYTQKREALEAQLKKQQLCKELRARIETYRAQEPVHAETQKRIDRARKAAPLAAHI
KHVTQCEQDAQRIHAEIQEKMRSREQLLMKRAAYVAQQSSIEEQRRLLQTLHSACIHIED
AHDVATSIRDISCQAHTLTQHIHTLAQQKTTLTQQEQSLCKELDILQREAGTIDTRTSAF
NDLQIQLAHAKKTQELSQRYAELCAAHATCTAQCEKLEKIHAQKSAYSTRAREQLLQTKE
QIHLQETRTHAVVLARLLEHQEPCPVCGSCIHPNPARQDIDNLEPLTRRMQRIEQTYAQL
ETSEKDVYHILTSERERRASYSAQMQEIQHSFSILTSCDTRSSCDIPNVQKITVRVLDLT
EKLSRAKDMLACAQHALLRKKQPEQDLQDVRAHLQQCSQELAKKETALHALQETLTQQRV
RIHALSIRLPKELLASNLLAPQKMQHEKESVAYWKEMLAHCQTLMRELHTHIEEYDREFN
EIENASSALGADIAAREDALNHVQKEYMHLARTVCCARTEAHFNNNEEVTAALMTDAELS
HAAAEIQFFNELRAADTHLLKTLEAEIGTEIPSDLDELNAQCHTLVKDEENFLSRIEILS
ATLHTLTHQYLKYEECSKQLAQKTQESAKLITLSDELNGINQKKIQFDAWALISFLHEIT
AYANIRLQKMSEGRYHLRVADSHVNARGYQGLALLVADAYTGSVRPSATLSGGETFMASI
SLALGLADSIQTRSGGIVLDSLFIDEGFGSLDEASLDKAIGILDEIREGSRMIGIISHVH
ELRTRIPHKILIKKTNAGSHVMQGDAE
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
gtgaagccgatgcgtcttacgctccacaacatcggtcctttcgttggcacccatacagtt
gacttcaccgcgctcggtcctatttttctagtgtgtgggaaaacaggttcaggaaaaacc
actctattcgatgcgatcgcctatgccctgtatgggaaaccccttggaacccgtgcagaa
gttatccgcagtctgcgcagtcattacgccgcaccatcagaagctgcatttgctacgctg
gaattttcactcggcactaaaatctaccgggtacaccggacgctgacttgcacactttcc
cacagaaaaacagagcaacccgagcagctgtatcttgagcaaaaaaaaggtcatggatgg
gagcgtattgcttgtgcgcataaaagtgaaactgaatgtgttattcacgatcttctcaaa
ctcaatagcaaagaatttgagcgcgtggttatgctcccacagggagaatgtgcgcaattt
ttaaaagcaaattcaaaagaaaaaaaagaaacgctgatgaatctatttcctgttgatcaa
tatactgctcttatggagcgagcaaaaaaaaaatcgctccatgccaaagcagtgcttgaa
acgctgcgttcgcaacttgaaactctatgtgcggagtgcatgcccgacacataccacgaa
aggaaacaaacgctagaagctgagttacagcacgcacgtgacgcactgcagcaaacccgc
atctcccatgcgtactatacacaaaaacgtgaagcgctcgaagcacagctaaaaaaacaa
caactttgtaaagagctgcgtgcgcgtatagaaacataccgcgcgcaagaaccagtccac
gcggaaactcaaaagcgtattgatcgcgcgcgaaaagcggcaccacttgctgcgcacata
aaacacgtcacccagtgcgaacaagatgcacagcgcattcatgcagaaatacaggaaaag
atgcgttcacgcgaacaattgctcatgaaacgagctgcgtatgtcgcgcagcagtcatcc
attgaagaacaacgccgtctactacaaacacttcatagtgcgtgcattcacattgaagac
gcgcatgacgttgccacgtcgatacgcgacatatcttgtcaggcgcacacactcacgcag
catatccacacgcttgcacaacaaaaaacaacacttacccagcaagaacaatcgttgtgt
aaagaactggatatactgcaaagagaagcgggtactatcgatactcgtacatctgccttt
aatgatttacaaattcaactcgcgcatgcaaagaagacacaagaattgtctcagcgatat
gccgagctctgtgcggctcacgcaacatgcactgcacagtgtgaaaaacttgagaaaata
cacgcacaaaaaagcgcgtatagcacacgggcacgtgagcagctccttcagacaaaagaa
caaattcatctccaagaaacccggacacacgcggtagtactcgcgcgtctcttagagcat
caagaaccgtgtcctgtctgcggctcttgcattcatccgaatcccgcacgtcaagacata
gataatcttgaaccgttaacccggcgcatgcaacgcatagaacaaacatacgcgcagctg
gaaaccagcgagaaagatgtgtaccacatcctcacctctgagcgtgagcgacgtgcatcc
tacagtgcacaaatgcaggaaatacagcattcattttccattcttacatcgtgtgatacg
cgatcatcctgcgatattccaaacgtgcaaaaaattaccgtacgtgttttggatctcacg
gaaaaattatctcgtgcaaaagatatgctcgcatgcgcgcaacacgctttactgagaaaa
aaacagcctgagcaggatttacaggatgtacgcgcacacctgcagcaatgctcacaagag
ctcgcaaaaaaagaaacagcactccacgcattgcaagaaacgcttacacagcagcgcgta
cgcattcacgcactgtccatacgtttacccaaggaattgcttgcatcgaacctacttgct
ccgcaaaagatgcagcatgagaaggagagtgtcgcctattggaaagagatgctcgcacac
tgtcaaacccttatgcgagaattgcacacccatattgaagaatacgaccgagagttcaat
gagatagaaaacgcttctagtgcgcttggcgccgacattgcagcgcgagaagatgcactg
aaccatgttcaaaaagaatacatgcaccttgcacgtaccgtgtgttgcgcacgaacagaa
gcgcatttcaataacaacgaagaagtaaccgccgctcttatgactgatgctgaactttct
catgctgcagcagaaattcaatttttcaatgaattgcgtgcggctgacacccatctactg
aaaacactcgaggcagaaataggaacagaaattccatccgatcttgatgaactgaatgcg
caatgtcatacgttggtaaaagatgaggaaaactttctctctcgtattgaaatactgtct
gccacgctacacacactcacacatcagtatcttaaatacgaagagtgttcaaaacagctt
gcacaaaagacgcaagaaagcgcaaagcttataactctttcagatgaactgaatgggata
aaccaaaaaaaaatacaatttgacgcatgggcactcatttcttttctgcacgaaattact
gcctacgcaaacatacgtttgcaaaaaatgagtgaaggacgttaccatctgagggtagct
gactcgcacgtcaatgcacgaggatatcaaggacttgcgctgctcgttgcagatgcgtac
actgggagcgtgcgcccttcggcaacactttcaggaggcgaaacctttatggcctctatc
agtcttgcacttggtcttgcagattctatccaaacccgatcgggaggtattgtgcttgac
tcgctgttcatagatgaaggatttggaagtttggatgaggcaagtttagataaggcaatt
ggcatcttagatgaaatcagagagggaagtcgcatgataggcatcatttctcatgttcat
gaattgcgcacgcgcatccctcacaaaattctgataaaaaaaacaaacgcaggatcacac
gtaatgcagggggatgcagaatga
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