Thermofilum pendens: Tpen_0304
Help
Entry
Tpen_0304 CDS
T00446
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
tpe
Thermofilum pendens
Brite
KEGG Orthology (KO) [BR:
tpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpe03019
]
Tpen_0304
03009 Ribosome biogenesis [BR:
tpe03009
]
Tpen_0304
04131 Membrane trafficking [BR:
tpe04131
]
Tpen_0304
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpe04147
]
Tpen_0304
Messenger RNA biogenesis [BR:
tpe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Tpen_0304
Ribosome biogenesis [BR:
tpe03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Tpen_0304
Membrane trafficking [BR:
tpe04131
]
SNARE
SNARE associated proteins
Others
Tpen_0304
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Tpen_0304
Exosome [BR:
tpe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Tpen_0304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
TIP49
AAA_22
AAA_2
AAA_5
AAA_14
AAA_33
RNA_helicase
AAA_28
AAA_18
UFD1
AAA_24
IstB_IS21
Mg_chelatase
nSTAND3
Parvo_NS1
Zeta_toxin
ATPase_2
Sigma54_activat
DUF815
AAA_7
AAA_25
Vps4_C
AAA_3
AAA_17
ABC_tran
TsaE
NB-ARC
PhoH
ATPase
SLFN-g3_helicase
Molydop_binding
Motif
Other DBs
NCBI-ProteinID:
ABL77714
UniProt:
A1RWY4
LinkDB
All DBs
Position
complement(270252..272450)
Genome browser
AA seq
732 aa
AA seq
DB search
MNNEGKVPEIELKVLEVRQHEAGRGRVRIDEDAMEALGISAGDVVEIEGKRKTVAIAWPG
YAEDKGKGIIRMDGWTRKNAGVSIGDKVKVRKAEVKPAQFIRLAPVSMTLAVDENFVAYV
KKRLVDRPIIEGDVIQIPVLGQVIHFNVVNIKPKGVVVVTDKTQLKILERPVDTGKIPRV
TYDDIGDLEEAKQKIREMVELPLRHPELFKRLGIDPPKGILLYGPPGTGKTLLAKAVANE
TDAYFIAINGPEIMSKFYGESEQRLREIFEEAKEHAPAIIFIDEIDAIAPKREEVTGEVE
KRVVAQLLALMDGLEARGDVIVIGATNRPNALDPALRRPGRFDREIEIGIPDKRGRLEIF
KVHTRSMPLAKDVDLEKLAEITHGFVGADIAALCREAAMKALRRVLPKIDLEKDEIPVEV
LETIEVTMDDFMNAFREITPSALREIEVEVPAVHWDDIGGLEDVKQQLREAVEWPLKYPE
SFSRLGIDPPKGILLYGPPGTGKTLLAKAVATESEANFVSIKGPEVYSKWVGESERAIRE
LFRKARQVAPSIIFIDEIDALAPMRGLVTSDSGVTERVVSQLLTEMDGLERLEGVVVIAA
TNRPDIIDPALLRPGRFDRLIYVPPPDEKARLEILKVHTRRMPLAEDVDLAEIARKTEGY
TGADIEVLVREAGLLALRENISIDKVYRRHFEEALKKVRPSLTPEIIKFYESWNERARKV
SKQQLTVTGFYV
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
gtgaataacgaaggaaaagtccccgagatagagctcaaagtgcttgaggtaagacagcac
gaggctgggaggggcagggtgaggatagacgaggacgccatggaggctctgggaataagt
gctggtgatgttgtggagatagagggtaagaggaagactgtcgccatcgcttggcctgga
tacgccgaggacaaggggaaaggcataatccgaatggatggctggacgaggaagaacgcc
ggcgtcagtataggcgacaaagtcaaggttagaaaggctgaggtgaagccggcccagttc
ataagacttgccccggtgtctatgacactcgccgtcgacgagaacttcgtggcttacgtg
aagaagaggcttgttgacaggccgataattgagggcgacgttatacagatccccgtgcta
ggccaggtaattcacttcaacgttgtgaacatcaagccaaaaggagtagtcgtagtcacg
gataaaactcagctcaaaatactcgagagacctgttgataccggaaagataccaagggta
acctacgacgatataggggacttggaggaggctaagcagaagattagggagatggttgag
ttgccgttaaggcacccagagctcttcaagcgcctcggtattgatcctccgaagggtata
ctgctctacggtcctccgggtaccggtaagaccctcctagcaaaagccgtagcaaacgag
actgatgcttacttcatagctattaatggccctgagattatgagtaagttctacggtgag
agcgagcagagactcagagagatattcgaagaggctaaggagcacgctcctgcgattatc
tttatcgacgagatagacgccatagcccccaagagagaagaagtcacaggagaagtagaa
aaaagagtagtagcacagctactagcactaatggacgggcttgaagctcgcggagacgtt
atcgttatcggagctaccaataggcctaacgccttggaccctgcgcttagaaggcccggc
cgctttgacagggagatcgagataggcatcccggacaagcggggaaggctcgaaatattc
aaggttcacactaggagcatgcctctagcaaaggacgtggaccttgaaaagctcgccgag
ataacccacggcttcgtcggggcagatatagcagcgctgtgtagagaagccgcgatgaaa
gccctccggagagtactgccgaagatagacttggagaaggacgagatcccagtagaggtg
cttgaaacgatagaagtcaccatggacgacttcatgaacgcattcagggaaataactccg
agcgccctcagggagatcgaggtagaagtaccggcggtgcactgggacgacatcggaggg
ctggaagacgtcaaacaacaactaagagaggctgtcgagtggcccttaaagtacccagag
tcgttcagccgcctcggtattgatcctccgaagggtatactgctctacggtcctccgggt
accggtaagaccctcctagcaaaagccgtagcgacagagagtgaggcgaactttgttagc
ataaagggtccagaggtctacagtaagtgggttggtgaaagcgagagagccatacgagag
ctgttcagaaaggcgaggcaggttgctccgagcataatattcatagacgagatagacgcc
ctcgcaccaatgagagggcttgtaacttccgattcgggggtcacagagcgcgttgtcagc
cagcttttgactgagatggatggtttggagaggcttgagggtgttgttgttattgctgct
actaataggcctgacattattgatcctgctttgctgaggcctggcaggtttgataggttg
atctacgtgcctccaccagacgagaaggctagactcgagatactcaaggttcacactagg
agaatgcctctagccgaagacgtagacctagcagaaatagcgagaaaaacagaaggatac
acaggtgcagatatagaagtgctggtgcgcgaggcagggcttctggcattaagggagaat
atttcgatagacaaggtttacaggagacacttcgaggaagcgttaaagaaggtaagaccc
tctcttaccccggagataataaagttttacgagtcgtggaacgagagagctagaaaggtt
tcaaagcagcagctaacagtaacgggtttctatgtatga
DBGET
integrated database retrieval system
