Tetrapisispora phaffii: TPHA_0C03390
Help
Entry
TPHA_0C03390 CDS
T02235
Symbol
TPHA0C03390
Name
(RefSeq) hypothetical protein
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
tpf
Tetrapisispora phaffii
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tpf01009
]
TPHA_0C03390 (TPHA0C03390)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpf03019
]
TPHA_0C03390 (TPHA0C03390)
04131 Membrane trafficking [BR:
tpf04131
]
TPHA_0C03390 (TPHA0C03390)
03036 Chromosome and associated proteins [BR:
tpf03036
]
TPHA_0C03390 (TPHA0C03390)
Enzymes [BR:
tpf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
TPHA_0C03390 (TPHA0C03390)
Protein phosphatases and associated proteins [BR:
tpf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
TPHA_0C03390 (TPHA0C03390)
Messenger RNA biogenesis [BR:
tpf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
TPHA_0C03390 (TPHA0C03390)
Membrane trafficking [BR:
tpf04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
TPHA_0C03390 (TPHA0C03390)
Chromosome and associated proteins [BR:
tpf03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
TPHA_0C03390 (TPHA0C03390)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Arb2
HTH_27
Motif
Other DBs
NCBI-GeneID:
11535262
NCBI-ProteinID:
XP_003684925
UniProt:
G8BRW5
LinkDB
All DBs
Position
3:complement(743315..745420)
Genome browser
AA seq
701 aa
AA seq
DB search
MSEQIGDKRKLKDESEFPSVSIGDEGKVIQVLPKRPVIVPTQKPNLHYTPLKTGICYDVR
MRYHAKIFTSYFEYIDPHPEDPRRIYRIYKILAENGLINDPSLTGVSDIGDLMLKIPVRE
ATKEEILDVHTEEHMQFLESTEKMTREELLSKTEKGDSVYLNNDSYISARLSCGGAIEAC
KAVVEGRVKNALAIVRPPGHHAEPQAAGGFCLFSNVSVAAKSILKTYPESVRKILIVDWD
IHHGNGTQKAFYEDDNVLYISLHRFELGKFYPGFPEGNYDKVGDGKGKGFNCNITWPVKG
VGDVEYIWAFEQIVIPMAREFRPDLVIVSSGFDAAHGDTIGQCHVTPNCYGYMTHMLKSL
ARGNLCVVLEGGYNLDSISNSALAVAKILIGEPPDEIPESDRDPKPGVLEMINKVIRVQS
KYWKCFRRKFGNFGGEYENAIESQIPKMFPLQDAIRNAQLSHYYDDFGMISLSLPNLNLP
KNSIICSSNFFKAKSLCVLLHDTPEVWGNRDIITGIIDPSTSIIFDSSLKFINWAIERET
AVIDINIPRSAFEADNYSSNLLSQDVMISLWDNHFKYIESLEKLCFIGIGEATSGIVHLL
GKRDTRTVTKAAINFVGSSSLKPIVPSLDESLGDWYFKNSLVFTDHFHGCWSENDKKPRK
KYGRVLRCDTDGIHNIIEERFEEATDFILDAFDEWSDTEDE
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacagattggggataaacgaaaactgaaggatgagagtgaatttccttctgtt
tctattggtgacgaagggaaagtcattcaagttttacctaagagaccggtgatagttcca
actcagaaacctaacttacactatactccattgaaaaccggtatttgctacgatgtcagg
atgagataccatgcaaaaatattcacatcatattttgagtacattgacccacatccagaa
gatccaagaagaatatatcgtatttataaaattttagcagaaaatggtttaattaatgat
ccttctttgacaggtgtttcagatattggtgatttaatgttaaagattccagtgagggaa
gcaacaaaagaagaaattcttgacgttcatacagaggaacatatgcagtttttagagagt
actgaaaaaatgactcgtgaagaattattgagcaaaacagaaaaaggtgattccgtttat
ttaaataatgattcttatataagtgcaagactgtcatgtggtggtgctatagaagcctgt
aaagctgtcgttgaaggtagagttaaaaatgcacttgctattgtaagaccacctggtcat
catgctgaaccgcaagctgctggtggtttctgtttgtttagtaatgtcagtgtagctgca
aaatcgattctgaaaacatatccagaaagtgtaagaaaaattttgattgtagattgggat
atccaccatggtaatggtactcaaaaggcattctatgaagacgacaatgttctttatatt
tcattacataggtttgaattaggaaaattttatccaggctttccagaaggtaattacgat
aaagttggggacggtaaaggtaaaggtttcaattgcaacatcacatggcctgtaaaaggt
gtaggtgatgtagaatatatttgggcttttgagcaaatcgtaatacctatggcacgtgaa
tttagaccagatttagttattgtatcgtcagggtttgatgctgcacacggcgatactatt
ggacaatgtcacgttacaccaaactgttatggttatatgacacatatgttaaaatcatta
gctagaggtaatttatgtgttgtacttgagggtggttataatctggactcaatctctaat
agtgccctagcagttgcaaagatacttataggtgaaccaccggacgaaatacctgaatcc
gatagagaccctaaacctggagtccttgaaatgataaataaagtcattagggtgcaatca
aaatactggaagtgtttcagacgcaaatttggtaattttggaggggagtacgaaaatgcg
attgaatctcaaataccgaaaatgttcccactacaagatgccattagaaatgcacaacta
tctcattattatgatgattttggtatgattagtttaagcttaccaaatttgaatttacca
aaaaattcaataatatgttcaagtaattttttcaaggcaaaatcattatgcgtcttattg
catgacacgcctgaagtgtggggaaatagagacataataactggtattatcgatccttct
acttcaataatatttgattcctcgttgaaatttataaactgggcaattgagagagaaacg
gctgttatcgatattaatattcctagatccgcatttgaagctgataattattcatcaaat
ttactatctcaggatgttatgatctcactttgggataatcatttcaagtacattgaatct
ctagagaaattgtgctttattggtattggagaggcaacatctgggattgtgcatttatta
ggtaaaagagatacaaggacagttacaaaagcagcaataaattttgtaggaagtagttct
ttgaaaccgatagtcccatcattagatgaatctctaggtgattggtacttcaagaactca
ttggttttcacagatcatttccacggttgttggtctgagaatgacaaaaaaccgcgtaag
aaatatggtagagttctcagatgtgatactgacggaatacataatataatagaagaaaga
tttgaagaggcaacagactttatcttagatgcatttgatgaatggagtgatacggaagac
gaataa
DBGET
integrated database retrieval system
