Tetrapisispora phaffii: TPHA_0D00370
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Entry
TPHA_0D00370 CDS
T02235
Symbol
TPHA0D00370
Name
(RefSeq) hypothetical protein
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TPHA_0D00370 (TPHA0D00370)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpf03019
]
TPHA_0D00370 (TPHA0D00370)
03009 Ribosome biogenesis [BR:
tpf03009
]
TPHA_0D00370 (TPHA0D00370)
Messenger RNA biogenesis [BR:
tpf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TPHA_0D00370 (TPHA0D00370)
Ribosome biogenesis [BR:
tpf03009
]
Eukaryotic type
Pre-60S particles
RNases
TPHA_0D00370 (TPHA0D00370)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
11534125
NCBI-ProteinID:
XP_003685115
UniProt:
G8BS60
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All DBs
Position
4:61016..61849
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AA seq
277 aa
AA seq
DB search
MFRLSRLLRNCRYYNSIGKSNPYLHNKRTGSYRFPKHIYDSKYKMSSTNVVRGPLVWIDC
EMTGLDHLNDHIIEICCIITDGDLNIVKDPVTGEDNVYESVVHYGKDVMSKMNEWCIQQH
GSSGLTDQVLKSEKTLASVQQEIQDFLVKYIPEQRVGLLAGNSVHVDRLFLLREFPKLVE
HLHYRIVDVSSIMEMCKRHNPELQSVVPPKQGAHTAKSDIIESINQLKWYKEHYFKNSTE
TAEFVETEKQKHANQNENVVTPTNVISSENKKRKLEN
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgttcaggttgtcaagattgttacgcaactgtaggtattacaacagtattggaaagagt
aatccatatttgcataacaagagaactggaagttataggtttccaaaacatatttacgat
tcaaaatataagatgagctcaacgaacgtcgtgagaggtccacttgtctggattgactgt
gaaatgacaggtctagaccatctaaatgaccatattattgagatctgttgcattattacc
gatggcgatttgaatattgtcaaggaccctgttactggagaagacaatgtttacgaaagc
gttgttcattatggtaaagatgttatgtcgaagatgaacgagtggtgtattcaacagcac
ggaagtagcgggttaacagaccaagttttaaagagcgagaagacgttggctagcgtgcag
caagaaatacaagattttttagtgaaatacatacctgaacaacgcgttggtctattggct
ggtaactccgttcatgttgatagactatttctgttgagagagtttcccaaactagtagaa
catctgcattacagaatagtggatgtgagtagtattatggaaatgtgtaagcgtcataac
cctgagttgcagagcgtggttccgccaaagcaaggcgcacacacggcaaaaagcgatatc
atcgagagtatcaatcaactaaaatggtacaaagagcattattttaaaaattccactgag
actgcagaatttgttgagacggaaaaacagaaacatgcaaaccaaaatgaaaatgtagtg
acacctaccaatgttatcagtagcgaaaacaagaagaggaaactagaaaactaa
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