Tetrapisispora phaffii: TPHA_0F02940
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Entry
TPHA_0F02940 CDS
T02235
Symbol
TPHA0F02940
Name
(RefSeq) hypothetical protein
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TPHA_0F02940 (TPHA0F02940)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpf03019
]
TPHA_0F02940 (TPHA0F02940)
Messenger RNA biogenesis [BR:
tpf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
TPHA_0F02940 (TPHA0F02940)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
TPHA_0F02940 (TPHA0F02940)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
TNV_CP
Motif
Other DBs
NCBI-GeneID:
11535476
NCBI-ProteinID:
XP_003686209
UniProt:
G8BUI9
LinkDB
All DBs
Position
6:complement(648881..649456)
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AA seq
191 aa
AA seq
DB search
MDKFGLEALLPLIKQDDPEFSKKYNHAMTIGADLTSIQHSLGIPNNNKRYRVLDTFQSPW
AETSRSEVEPRYFTPKSFTNIPKVLQSIDTPSVFNSVETDQQRISLFQDETLFYLFYKHP
GTVIQELTYLELRKRNWRYHKILKAWLTKDPIVEPIVTADGQSERGSYIFFDPQRWEKCQ
RDFVLFYNAIM
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atggataaatttggtttagaagcactgcttcctttaatcaaacaggatgaccctgaattt
tcaaaaaaatataatcatgctatgaccatcggtgctgatttgacctcaatacaacattct
ttaggcatacctaataacaataaaagatatcgtgttctggatactttccaatctccatgg
gcagaaacttctaggagtgaagtagaaccacgttatttcacaccaaagtcattcactaat
ataccaaaagttttacaatctatagatacaccatcagttttcaattctgtggaaacagac
cagcaaagaatttcattatttcaagatgagacgctgttttatttattttacaagcatcct
ggcaccgtgatccaggaattaacctatttagaactgaggaaacgtaattggcgttatcat
aaaatattaaaggcttggctaacaaaagatccaatagtagaacctatagtaacagcagat
ggacaaagtgaaaggggctcttacatattttttgacccacaaagatgggaaaaatgtcaa
agagatttcgtattattttataatgccatcatgtga
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