Tetrapisispora phaffii: TPHA_0I01090
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Entry
TPHA_0I01090 CDS
T02235
Symbol
TPHA0I01090
Name
(RefSeq) hypothetical protein
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf04111
Cell cycle - yeast
tpf04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
TPHA_0I01090 (TPHA0I01090)
04113 Meiosis - yeast
TPHA_0I01090 (TPHA0I01090)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpf03036
]
TPHA_0I01090 (TPHA0I01090)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tpf00535
]
TPHA_0I01090 (TPHA0I01090)
Chromosome and associated proteins [BR:
tpf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
TPHA_0I01090 (TPHA0I01090)
Meiosis-specific proteins
Cohesin complex and associated proteins
TPHA_0I01090 (TPHA0I01090)
Proteoglycans [BR:
tpf00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
TPHA_0I01090 (TPHA0I01090)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
BLOC1_2
Nuf2_DHR10-like
AAA_29
Motif
Other DBs
NCBI-GeneID:
11532899
NCBI-ProteinID:
XP_003687049
UniProt:
G8BXI7
LinkDB
All DBs
Position
9:complement(252902..256552)
Genome browser
AA seq
1216 aa
AA seq
DB search
MYIQKVIIKGFKTYRNETIIDDFSPHYNIIIGSNGSGKSNFFAAIRFVLSDDYSNLKREE
RQGLIHQGSGSVMSASVEIQFYDPGNSMILPSGVAVNPDSTVSIRRTVGLKKDDYQINDR
NVTKSDIVRMMESTGFSMSNPYNIVPQGRIVALTNAKDKERLQILEDVVGAKSFEAKLTA
SLKKMEETEKKRMQIAKEMKELTKKLDEMEEERKELEKYNDLEGDRKVFQFTLYDRELND
IINQIEKLESEYTNILYTSEQYLQELDKREGIVVDITKTLQNTEASLKLKGTTELQQAKF
HFTDLQNKVANYDVTINDIQSQINSQEEQTKIDQNNLNILSDAIKEKRKLVAECLPKFEE
LTKQENELRSVLASLQERQKNLMIKKGKYAKFTTVEERNKWIDEEVANIKEEFTLLKTNK
EQLTSEQEYNEQEVKKLDEDIEDLIDSTQGPVVLGELDEVKEKIAKVKTEYSQKFDARRE
LWREEQRLQTILENMSEGVKRSERILNETMHRSVANGIKNVKEIVDKLNLPDDAVLGTLG
ELIKVSEKYKRCAEVIGGNSLFNIVVDTDETASLIMDELYRMKGGRVTFMPLNRIRMDSN
FTYPPNDQASCTPLIKKIKFDVRYEKAVMHVFGKTIVVKDLGEGSKLAKRFKMNAITLDG
DRADKRGELTGGYYDQHQKMKLDALKDLKNANAQFKQITLELDTIHQKLNEMDSSIDQQN
SLIKAETNKQETMLTNIDNLNLKLNNKRGEKAIAEESIRKLKDKINNIEKHLDSSGKNLE
TFLKDREQPFDSELSEVEKVDLENITISISERSEKLNEITEELDDVSGSLDKLRAQLDAK
LIPQYNNLKAKISTSNDSYVIGLKNELKSATSERDLLLEAYSRAKLEFTKLQNELEQLKS
EKMNNQKILDKANSQQKLLLKKLDNFQKDTEKIMIKKYTLASRRDEIQQKIRELGLLPEE
SLSKYQESSSDELLNELNNITKELSTLHNVNKRAFENFKKFSEKQNELVERAKELDDSKN
SIQELITQLKEQKITAVDTTFKKVSENFTKVFEKLVPRGTANLIIHRRSDDSLASMDINT
DSQNISELVYTGVSISVSFNSKRDEQLHVEQLSGGQKTVCAIAMILAIQMVDPAPFYLFD
EIDAALDKQYRTAVADVIKSLSSNAQFICTTFRTDMLQVADKFFRVKYENKISTVVEINR
DSAINFIRGSNKIANI
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgtatattcaaaaagttattatcaaaggtttcaaaacctatagaaacgaaactataatc
gatgatttttctccacattataacattataatcggttccaatggttctggtaaatcaaat
ttctttgctgccattcgatttgtcttaagtgatgattactctaatcttaaaagagaagaa
agacaaggtctcattcatcaaggttcgggttcagttatgagtgcatcagttgagattcaa
ttttatgatcctggtaattctatgattttaccttcaggtgtggcagtaaatccagatagt
actgtctctatcagaagaacagtcggtttgaaaaaagatgattatcagattaatgacaga
aatgtaactaaatcagacatcgttagaatgatggaaagtactggcttctcgatgagtaat
ccttacaacattgttccacaaggtagaattgttgctttgactaatgcaaaagataaagag
agattgcaaatattggaagatgttgttggtgctaagtcgtttgaagccaagttgacggct
tctcttaagaaaatggaagaaactgagaaaaagagaatgcaaattgcaaaagagatgaaa
gaattgacaaaaaaattagatgaaatggaggaagaacgtaaggaactagaaaagtacaat
gacttggaaggtgataggaaggtctttcaatttacattgtatgatcgtgaattgaacgat
attattaatcaaatagaaaaattagaatctgaatataccaatatcttatatacttcagaa
cagtatttacaagagctagataaaagagaaggtattgttgtagacattacaaaaactctt
caaaatacagaagcatcgttaaagttaaaaggtaccactgaacttcaacaggcaaaattt
catttcactgatctacaaaataaagttgcaaattatgatgtaactataaatgatatacaa
tctcagattaactcacaggaagaacaaacaaaaattgatcagaataatctgaatatttta
agtgatgctataaaagaaaaacgaaagctagttgctgaatgcctgccaaaatttgaagaa
ttgactaagcaagaaaatgaattaaggtcagtgttagcatctcttcaagaaagacaaaag
aatttaatgataaaaaaaggtaaatatgcgaaattcactactgttgaagaacgtaacaaa
tggatagatgaagaggtcgcaaatataaaagaagaatttacattgttaaaaactaataaa
gaacaattgacaagcgaacaagaatacaatgagcaagaggtgaaaaaacttgatgaagat
attgaagatttaattgattcaactcaaggaccagtagtgttgggcgagttggatgaagtc
aaagaaaagatagcgaaggtgaagacagaatatagtcaaaaatttgatgctcgtagggag
ctatggagagaagaacaaagattacaaacgattcttgaaaatatgtcagaaggggtgaaa
aggtcagaaaggatactgaatgaaactatgcatcgttccgtggcaaatggtattaaaaat
gttaaagagattgttgataagttaaatttaccagatgatgccgtgttagggacattaggt
gaactaattaaggttagcgaaaaatataagagatgtgcagaagtaatcggtggtaattct
ttattcaatatcgttgtcgatacagatgagacagcttcattaataatggatgaactgtat
cgcatgaagggtggtagagtcactttcatgccgttgaatagaatccgtatggattcaaat
ttcacttatccaccaaatgatcaagcttcatgtactccattaattaaaaagattaaattt
gacgtcagatacgaaaaagctgtcatgcacgtatttggcaaaactattgtggtaaaggat
ctgggagaaggtagtaaactggcaaagagatttaaaatgaatgcaataacactggatggt
gaccgtgccgataaaagaggtgaattaaccggtggttactatgaccaacatcagaaaatg
aaattggatgctttaaaggatttgaagaacgcaaacgctcaatttaaacaaataacttta
gaattagatacgattcaccaaaaattaaatgaaatggattcgagtatcgatcagcaaaat
agtttgattaaagcagaaacaaataaacaagaaacaatgttgactaatattgataattta
aatttaaaattaaataataaaagaggtgagaaggcgatagctgaagaatctatacgtaaa
ttaaaggataaaattaataatattgaaaaacatctggattcgagtggcaaaaaccttgaa
acctttctcaaagatagagaacagccttttgatagcgaattgtcagaagttgaaaaagtt
gacctagagaacatcaccatatccatatcagaaagatcagagaaattgaatgagattact
gaagaattagatgacgtttctggctcattggataaattgagagcacaacttgatgcaaag
ttaatacctcagtataataacctgaaagccaaaatttcgacatcgaatgattcttacgtc
attggtcttaaaaacgaattaaaatctgcgacttctgaaagggacttgcttttagaagca
tattctagagccaaattagaatttactaaacttcaaaatgaactagaacaattaaaatct
gagaagatgaataatcaaaaaattctagataaggctaattcacagcaaaaactattattg
aaaaaattagataactttcagaaagacactgaaaagattatgattaagaaatacacatta
gcttcaagacgtgatgaaattcaacaaaagattagagaactcggtctactacctgaagag
tcattaagcaaatatcaggaatcaagtagtgacgagctactgaatgaattgaataatata
actaaagaactctctacattgcataatgtgaataaaagagcatttgagaatttcaagaag
ttttctgaaaaacaaaatgaactggttgaaagggcaaaagaattagatgactcgaagaat
tcaattcaagaattaattacacaattaaaggagcaaaaaattacggcagtagatacaaca
tttaagaaggtatctgaaaattttactaaagttttcgaaaaattggttccacgaggtact
gcaaatttaattatacatcgtcgttctgatgatagtttagcttcaatggacattaatact
gattctcaaaatattagtgaactagtctataccggggtatctatatctgtgtcattcaat
tctaaaagagatgaacaattgcatgtggaacaactatccgggggccaaaaaactgtgtgc
gctattgctatgattttagccattcaaatggttgacccagcaccattttatttatttgat
gaaatagatgctgctctggataagcaatatagaacagctgtagctgatgtcataaaatct
ttatcatcaaatgctcaatttatctgtacaacttttagaaccgatatgctgcaggttgct
gataaattcttccgtgtaaagtatgaaaataaaatatctacagttgttgaaattaataga
gattccgcaattaatttcattagaggaagcaataaaatagcaaacatatga
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