Tetrapisispora phaffii: TPHA_0L00230
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Entry
TPHA_0L00230 CDS
T02235
Symbol
TPHA0L00230
Name
(RefSeq) hypothetical protein
KO
K14828
pre-rRNA-processing protein RIX1
Organism
tpf
Tetrapisispora phaffii
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpf03009
]
TPHA_0L00230 (TPHA0L00230)
Ribosome biogenesis [BR:
tpf03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
TPHA_0L00230 (TPHA0L00230)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIX1
Motif
Other DBs
NCBI-GeneID:
11531651
NCBI-ProteinID:
XP_003687814
UniProt:
G8BZQ2
LinkDB
All DBs
Position
12:complement(24415..26748)
Genome browser
AA seq
777 aa
AA seq
DB search
MTSNFVPVAVLANQLESCNGSDFQILLRHLRSQNYIKENLLKSELSLLSTKILKLLNSGN
NYQLWKGCHAATVICSYNPLVLCSFSGQFLAAVYSKLEQKVNYYNSIIDTQEGKVILECL
VSTSSILMDQMRNKPTVSREGLVPKLKAIIPTFITLCQYQPKLCLPVLKNLLYKNSTTFK
PFVNKYRVVLTNLINIDYDTLDKETQKLICVNYAYLHLIKIQATAANDDDATKAHHKLHQ
DEAWRTGLFSVLGQFKDVFELCGEILDLEHDKELYKLIESLPTDLSKTDNKSLLELSNLN
LDMNKPLSLWKIPQRLNLLVDLLSAFISLPTPYPVRIPIGGINAVCESALSLTQNFIPLK
RDLRRDRELTAVINLVLSSVQFSGIKLWKVMIDSYGKHCLSYLPNILSSLELFIPLQQKS
TKINFEACTELKSQFLLLFSIMNSLSKHVGHQLNELDLINKLIDVSLVLVEDSSLIETLF
DNIEKSKIDASKTGKSKSKKSQNRDKIGTITDIYTHPSQFVIKESLVLFDEVNSFLCFVL
SNWKLNATQHVKIINYSISRSLSFKQTIRKIPSSFVKLLRTVTIYPGSDHISILPIAVDL
LKEFGDPIFDVMIHPRLPMSIIHSVAKPLSIEVNDIKDDDVENEQSDDQTKLMDMSNAGE
ISESQENSKLKQMIEDTKNSSKIVVDETKLFKKRSMQETEKLEESKRIRVDQTSAPVTIN
QLDVEVTKYPEAEQVENVIISNTVVVEEEAAPVNESEDEDSEFEIPDIVLSGDEDDE
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcaacttcgtcccagttgcagttctggctaaccagttggaatcgtgcaatggc
tccgactttcaaatcctgttaagacacttgagatctcagaattacatcaaagagaattta
cttaaatctgaattgtctcttttatctacaaagatcctaaaactgttaaactctggtaac
aactaccaactttggaaaggttgccatgcggcaaccgttatttgttcatacaatccatta
gttctatgttcattttctggacaatttttggcagctgtctactctaaattagagcaaaaa
gtgaactattacaactctattattgacacccaagaaggtaaagtcatcttagaatgttta
gtgtcaacatcttctatcttaatggatcaaatgagaaataaaccaactgtctcaagagaa
ggtttagttccgaaattaaaagctatcattccaactttcattactttatgccaataccaa
ccaaaattatgtttacctgttttaaagaatttattgtacaaaaactctacgacttttaaa
ccttttgttaataaataccgtgttgtattaactaatttgataaatattgattacgatact
ttagacaaagaaactcaaaaattaatttgtgttaactatgcttatttacatttgataaaa
atccaagcaactgcagctaatgatgatgatgccactaaagctcatcataagcttcatcaa
gatgaagcatggagaactggtttgttttctgtactaggccaatttaaagatgtctttgaa
ttatgtggagaaattttagatttagaacatgataaagaattatataaattaattgagagt
ttgcctactgacttaagcaaaacagataacaaaagtctattggaactatcaaatttgaat
ttagacatgaataagccactttctttatggaaaattccacagcgtttgaacctattagtt
gatttgttatctgcttttatttcattaccaacaccataccctgtcagaattccgatcggt
ggtatcaatgctgtctgtgaaagtgcattatctttgactcagaacttcattccattgaaa
cgtgatttacgccgtgatagggaactaactgctgtcatcaatcttgttttatcatcagtt
cagttttcaggtataaagttgtggaaagttatgattgatagttatggtaaacactgtttg
tcctatttaccaaatatattaagttcattggagttattcataccattacagcaaaaatct
accaagattaattttgaagcctgcacagagcttaagtcacagtttttattattattttca
ataatgaattctctatcaaaacatgtcggtcaccaattaaatgaacttgatttaattaat
aaattgattgatgtttcattagttttagttgaagattcatctctgatcgaaactttattt
gataacattgaaaaatccaaaattgatgcctctaaaactggcaaaagcaaatcaaagaaa
tctcaaaatagagacaaaattggtacaattactgatatatacactcatccgtctcaattt
gttataaaagaatcattagtcttatttgatgaagttaacagtttcttatgttttgtctta
agtaattggaaactaaatgctacacaacatgtgaaaataataaattattcaatctctaga
tcattaagttttaaacaaactataagaaaaattccatcttcttttgttaaattgttgaga
actgttacaatctatccaggatcagatcatatttctatcttaccaattgctgtggaccta
ctaaaagagtttggagatccaatatttgatgttatgattcaccctagattgccaatgtcc
attattcattcagttgctaaacctctgtcaattgaggtcaatgacataaaagatgatgat
gttgaaaatgaacaaagcgatgatcagacgaaattaatggatatgtctaacgctggagaa
atttcagaatctcaagaaaattccaaacttaaacagatgattgaagatactaaaaattct
tcaaaaatagttgttgatgaaactaaactattcaagaaaagatcaatgcaagaaactgaa
aagttggaagaatcaaaacgtatcagagttgatcaaacttcagctccagtgactattaat
caactagatgtggaagttacaaagtatccagaagctgaacaagtcgaaaatgtcattata
agtaatactgtagtagtagaagaagaagctgctccagtaaatgaatctgaagatgaagat
tctgaatttgaaattccagatattgttctaagtggagatgaggatgacgaataa
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