Treponema primitia: TREPR_0447
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Entry
TREPR_0447 CDS
T01507
Name
(GenBank) DNA polymerase III, gamma and tau subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
tpi
Treponema primitia
Pathway
tpi03030
DNA replication
tpi03430
Mismatch repair
tpi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TREPR_0447
03430 Mismatch repair
TREPR_0447
03440 Homologous recombination
TREPR_0447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpi03032
]
TREPR_0447
03400 DNA repair and recombination proteins [BR:
tpi03400
]
TREPR_0447
Enzymes [BR:
tpi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TREPR_0447
DNA replication proteins [BR:
tpi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TREPR_0447
DNA repair and recombination proteins [BR:
tpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TREPR_0447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
RuvB_N
AAA_5
AAA_22
AAA_14
AAA_30
AAA_16
Rad17
Viral_helicase1
AAA_2
AAA_19
RNA_helicase
AAA_18
DUF815
Motif
Other DBs
NCBI-ProteinID:
AEF86972
UniProt:
F5YM59
LinkDB
All DBs
Position
complement(3890787..3892751)
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AA seq
654 aa
AA seq
DB search
MGPLFFCRFSGYTGSMAYEVTATKRRPKTFDELAGQDFVAATLKSSIETGRIAHAYLFSG
PRGCGKTSAARILARSLNCEKGPTVTPCGECPSCREITRGASLDIIEIDGASNNSVNDVR
QIKDEVIFPPQGGRKKIYIIDEVHMLSQSAFNALLKTIEEPPEYIVFIFATTEVHKVPAT
IRSRCQQFNFRLIPIETIQGILKDTCAEMGIEAEDEALFWIAKESTGSLRDAYTLFDQVA
SFSEGHIRSQLIRDKLGLVGLDKLNALAESCAANDTAGAFAQIDEILDAGIAIEQFVIDL
AGYYRSLLLLKNGVTRESLLGFGPDRFSALVQEKLDSPRLEQALSLLLDLYRDIRYSVSP
RFELETAVSKLCWLDRWVSPLELRAAIAGARNILDKGDGGGIAGPLAGPGSVAPAVQDKT
DLSRPGAFVEGFKRVLAAREAADAAAQAELVARGTALQVASDRAAVSQMGEPSAPGAGLA
AGAGLSGSGPGVSAEAGALPGESPVEAAVPCKDLPELREALIKSLRQDRGLLASGLDKSL
PWEWAGANSIGDDGNGANTVETNGSGDSPGEGKLRIPVQDPLTAELIKKDSALIRQLLGK
LWGKPVLPEAVQVPAGAPGGVEPEKPLSPQAEMVRRMFRGTVVKTNGMEKNDGH
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
ttgggccccctttttttctgccgcttttccggctatactggcagcatggcttatgaagta
accgctaccaagcggcgtcccaagacttttgatgaattggcgggccaggattttgtggct
gccaccctgaaaagctccatagaaaccggacgtattgcccatgcctacctgttttccggc
cccaggggctgcggcaagaccagcgccgcccggattttggcccggtccctgaactgcgaa
aaggggcccacggtgacgccctgcggggaatgtcccagttgccgggaaattacccggggg
gccagtctggatatcatcgaaattgacggggcttccaataactcggtcaacgatgtgcgt
cagattaaggatgaggtcatcttcccaccccagggtgggcggaagaagatctatattatc
gatgaagtccacatgctctcccaaagcgcctttaacgccctcctcaagaccattgaggag
ccgcctgagtatatcgtctttatttttgccaccacggaagtgcataaggtgccggctact
atcaggagccgttgccagcagttcaactttaggcttatccctatcgaaacgattcagggt
attttgaaggatacctgcgcggagatggggatagaggctgaggacgaggccctgttctgg
attgccaaggagtctacgggcagcctgcgggatgcctataccctgtttgaccaggtggct
tctttttccgaggggcatatccggtcccagcttatccgggacaagctgggactggtggga
ctggataagctcaacgccctggcggaaagctgcgcggccaacgatactgccggggcgttc
gcccagattgacgagatcctggacgcggggattgcgatagaacaattcgtcattgacctg
gcggggtattaccggagtctgctgcttttgaaaaacggggtgaccagggagtccctcctg
gggttcgggccggaccgcttctctgccctggtccaggaaaagctggattcgccccggctt
gaacaggctttgtccctgctgctggacctttaccgggatatacggtactcggtgtccccc
cggtttgagctggagacggcggtttctaaactctgctggctggaccgctgggtgtccccc
ttggaactacgggcggctattgcgggggcccggaacattctggacaagggtgatggggga
gggatagccggccctttagccgggccggggtcggtagccccggcggttcaggacaagacc
gaccttagccggcccggggcctttgtcgaaggttttaagcgggttctggctgcccgggaa
gctgccgatgcggcggctcaggcggagcttgttgcgcggggaactgcgttgcaagtggcg
tcggatcgggcggctgtgtctcagatgggggaaccgtcggccccgggtgcgggactggcg
gcgggggccggattgtccggctctggtcccggcgtttcggctgaagccggtgctctcccc
ggagagtcccccgtagaagcggctgtgccctgtaaggatctgccggaactgagggaggcc
cttatcaagagcctgcggcaggatcgggggcttcttgcttcagggctggataagtccctg
ccctgggagtgggcgggcgctaacagcatcggcgacgatggcaacggcgctaacactgtt
gaaacgaacggttccggcgattcccccggcgaaggaaagctccgtatcccggtacaggat
cccctgacggcagagctgataaagaaggattctgcccttatcaggcagttgctgggaaaa
ttgtgggggaagcccgtgttgcccgaagcggttcaagtcccggccggggccccgggcgga
gtggagccggagaagcccttgagcccccaggcggaaatggtccgccgtatgtttcggggt
acggtggttaaaacaaacggaatggagaaaaacgatggacattaa
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