Treponema primitia: TREPR_0731
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Entry
TREPR_0731 CDS
T01507
Name
(GenBank) nuclease sbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tpi
Treponema primitia
Brite
KEGG Orthology (KO) [BR:
tpi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpi03400
]
TREPR_0731
DNA repair and recombination proteins [BR:
tpi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TREPR_0731
Archaeal homologous recombinant proteins
TREPR_0731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_27
ABC_tran
nSTAND3
CENP-F_leu_zip
AAA_21
NTPase_1
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AEF84379
UniProt:
F5YJF5
LinkDB
All DBs
Position
complement(3580249..3583431)
Genome browser
AA seq
1060 aa
AA seq
DB search
MRPLKLTMVNFGPFVGTTEIDFTDLDDIFLITGKTGAGKTTIFDAICYALYGTVPGSRQG
HINRLRSDYAEEYQECLVSLEFAIGEKQYQVDRNPKHERPKKRGFGTTGDNENAVIYAIL
PGEQGGVTKKSLSSKKADADKLIQDLIGLSPEEFFKIVLLPQGEFAEFLRQNTNQRRDVL
LKLFPVDFAVRVRELAQKKAREAETLSREAERSLMEISRRVSYETYPELHAKAEEALQKA
REEARRLEQENTRLDRILTLEENRKALELRQAQTGEEAAALDAKASSIAEKESRLALSRK
AQPLAHHLILETEKREILGVALVELEKVRQDLTQAERKLHEAETAAGELPALEKELAGSR
EKHPGLVEMAGEEKLLEQKQRELDQITKIAEEGRRNIGALKKSLEEKDRLIAERRSLADQ
AAAINESLDQERDLKDRLLALRQAAVEAEELGAALDTATDRARGLEAKKGELEKRVPVLR
EELRLVETEKETGERADMAAHLAVELKPGEPCPVCGSRDHPLSAAAHPRSFGIQERIESL
RGSLKDAERDLTARSTELESAKQELAQTQRKLDKLRAGMVSLDTGSDKPLLPAVESDQVR
RGLVLDKPFPTAAELGRLLEAKSRELTALAARQKEARTAGDNMAILYREREGLLAKQMEM
EKNVSALEEQFRGLEKSVVEMRDKHRGLLEEGKLSNAAEALEALDRSIGDLERRIRERRE
NLDAAGREAAAARAREEGSAANRSEAEKQHREAAAALKEALASSSFSNAESLRAAILGRD
AESALEAGIDQWKVERSRLKTQGEELERSLEEIRTARIPLGPSPAEPEEIQAALKTLATD
REKAETGRERVGMELSALEQDAARLKEAGKRREELAQSSGRLSALAADLGGNNPKRKPFD
AWLLGLYLKEVAAFATKRLYRMSESRYSLILNSERVAGNALAGLDLAVFDSATGKTRPCA
TLSGGESFMASISLALGLADSIQARSGGIRLDAVFIDEGFGSLDEGTLDKAMIVLDELRE
HRMVGLISHVGEMRSRIPSRIEVIKTGSGSRIVVGANLPD
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgagacccctcaaattaaccatggtaaacttcggtccctttgttgggaccacggaaata
gactttaccgatctggacgatatctttctcatcaccgggaaaaccggcgcgggcaagacc
accatttttgacgccatctgttatgccctttacgggaccgttcccggaagccgccagggc
cacataaatcggctgcggagtgactatgcggaggaataccaggagtgtttggtttccctg
gaatttgccataggggagaagcagtaccaggttgaccggaaccccaagcacgaacggcct
aaaaagcggggtttcggcaccaccggggataatgaaaacgcggtgatctatgcaatcctc
cccggggagcagggcggggtaactaaaaaaagcctgagttccaaaaaagccgatgcagat
aagttgattcaggatctgatcggcctgtcgccggaggaatttttcaaaatagttctcctg
ccccagggtgaattcgctgagtttctcaggcaaaataccaaccaacggcgggatgtgcta
cttaaactgttcccggtggattttgcggtacgggtccgggaactcgcccagaaaaaggcc
cgggaagctgaaaccctttcccgtgaagcggaacggtcccttatggaaatttcccggcgg
gtttcatatgaaacctaccccgagcttcatgccaaggcggaggaagctctgcaaaaagcc
cgtgaggaagcccgccgcctggagcaggaaaatacccggcttgaccgcatccttaccctg
gaggaaaaccgcaaagccctggaactacggcaagcccaaaccggggaagaggccgccgcc
ctggatgcaaaggcgtcttctatcgcggagaaggaatcccggcttgccctgtcccggaaa
gcccagcccctggcccatcaccttatcctggaaacggaaaaacgggaaatcctgggggta
gccctggtggaactggagaaggtccgccaggatttgacccaggcggagcggaagctccat
gaggcggaaacggcggctggggaacttccggctctggaaaaggaactggccggcagccgg
gaaaaacacccgggccttgtggagatggcaggcgaagagaagctgttggagcaaaaacaa
cgggaacttgatcagattacaaaaattgcggaggaaggccgccggaatatcggggcgttg
aaaaaaagtctggaagagaaagaccggcttatcgcggagcgccggagcctggcagatcag
gcggcggctatcaatgaaagcctggaccaggagcgggacctgaaagaccggctgcttgcg
ctgcgccaggccgcagtcgaagcggaggaattgggggcggccctggataccgccactgac
cgggcccggggactggaagccaaaaaaggggaactggaaaaacgggtaccggtactcaga
gaagagcttcgtctggtggagacggagaaggagacgggtgaacgggctgatatggccgcc
caccttgcggtggagctgaaacctggggaaccctgtccggtctgcggctcccgtgaccac
cccctatctgccgccgcccacccgcgatccttcggtatccaggagcggatagaatccctt
cgcggctcactcaaggacgctgagcgggacctcaccgcccgatctacggaactggaatcc
gcaaaacaggaacttgcccagacccaacggaaactggacaagctgcgggctggcatggtt
tccctcgacactggttctgataagccgctgctgcctgcggtggaatcggatcaggtaagg
agggggctcgtccttgataagccttttccgacagcggcagaactgggtcggcttttggag
gcgaagtctcgggaacttaccgccctggctgcccggcagaaggaagcccggaccgccggg
gacaacatggcaatcctctaccgggagcgggaagggcttttagccaaacaaatggaaatg
gaaaagaacgtctcggcgctggaggaacaattccggggcctggagaaaagcgttgtggaa
atgcgggataaacaccggggacttcttgaggaagggaagctttccaatgcagccgaagcc
ctggaagctctggacagatccatcggtgatctggagcggcgtatccgggaaaggcgggaa
aacctggacgccgcaggccgggaagccgccgcagccagggcccgggaggagggaagcgcc
gcgaaccgcagcgaagcggaaaagcagcatcgggaagccgccgccgcgctgaaagaagcc
ctggcctcatcgtccttttccaatgccgaatccctccgagccgccatcctgggccgggac
gccgaatccgccctggaagctggtattgatcagtggaaggtcgaacggtcccgcctgaaa
acccagggggaagaactggaacggagcctggaagaaatccggaccgcccgcattcccctg
ggaccgtcccccgcagagccggaggaaattcaggccgccctgaaaaccctggctacagac
cgggaaaaagccgaaaccgggcgggagcgggtcggcatggagctttccgccctagaacaa
gatgcggcccggctgaaagaagcggggaaacgccgggaggagctggcccaaagctcaggg
cgcttaagcgccctggcggcggatcttggggggaacaatcccaaacggaagcccttcgac
gcttggctcctgggtctctacctgaaggaggtagccgcctttgccaccaagcggctttac
cggatgagcgagtcccggtactccctgatcctgaacagcgaacgggtcgcaggcaacgcc
ctggccggcctggacctggcggttttcgactccgccaccggtaagacccggccctgcgcc
accctttccgggggcgaaagcttcatggcctccatcagcctggccctgggcctggccgac
tccatccaggctcgttccggcggcatccgactggatgcggttttcatcgacgaaggcttc
ggcagcttggatgagggtaccctggacaaggccatgatcgtgctggacgaactccgggag
caccgcatggtaggccttatctcccacgtgggggaaatgcgctcccgcatccccagccgc
attgaagtgatcaaaaccgggtccggatcaaggattgtagtaggcgccaatttacccgat
tga
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