KEGG   Thermococcus piezophilus: A7C91_04645Help
Entry
A7C91_04645       CDS       T04941                                 

Definition
(GenBank) DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
tpie  Thermococcus piezophilus
Pathway
tpie03030  DNA replication
tpie03410  Base excision repair
tpie03420  Nucleotide excision repair
tpie03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tpie00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    A7C91_04645
   03410 Base excision repair
    A7C91_04645
   03420 Nucleotide excision repair
    A7C91_04645
   03430 Mismatch repair
    A7C91_04645
Enzymes [BR:tpie01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     A7C91_04645
    6.5.1.6  DNA ligase (ATP or NAD+)
     A7C91_04645
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     A7C91_04645
DNA replication proteins [BR:tpie03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    A7C91_04645
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     A7C91_04645
DNA repair and recombination proteins [BR:tpie03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     A7C91_04645
   NER (nucleotide excision repair)
    Other NER factors
     A7C91_04645
   MMR (mismatch exicision repair)
    Other MMR factors
     A7C91_04645
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DNA_ligase_OB_2 TPR_1
Motif
Other DBs
NCBI-ProteinID: ANF23594
UniProt: A0A172WJG6
LinkDB All DBs
Position
861235..862917
Genome map
AA seq 560 aa AA seqDB search
MKYRELSDLYRRLENTTLKTLKTKFVADFLKRVLDEELLEIVPYLILGKVFPDWDERELG
VGEKLLIKAVSKATGIPEKEIENSIKDTGDLGESVALALKKKRQKSFFSQPLTIKRVYKT
FVKISEASGEGSQDRKLKYLANLFMDAEAEEGKYLARTVLGTMRTGVAEGILRDAIAEAF
KVKAELVERAYMLTSDFGYVAKVSKLEGNEGLSKVQIQIGKPIRPMLAQLAANVKEALIE
MGGEAAFEIKYDGARVQIHKDGDTVVVYSRRLENVTRSIPEMVEAIKSHIKAEKAIVEGE
LVAVGDGGRPRPFQYVLRRFRRKYNIEEMIEKIPLELNLFDALYVDGEGLIDVQFRERRA
RLEEIVEESGKVKLAQQLVTKNPEDAEEFYKRALELGHEGLMAKRLDSVYEPGNRGKKWL
KIKPTMENLDLVIVGAEWGEGRRAHVLGSFLVAAYDPEQGRFVPVGKVGSGFTDEDLVEF
TKMLKPLIVKEEGKYVEIEPKVVVEVTYQEIQKSPKYESGFALRFPRYLALREDKGPEEA
DTLERIAQLYEFQERFRAKR
NT seq 1683 nt NT seq  +upstreamnt  +downstreamnt
atgaaatacagggaactttctgacctttaccgcaggctcgagaataccacactcaagacg
ctgaagaccaagtttgtggccgatttcctgaagagggttcttgatgaggagctccttgag
atagtcccataccttatcctcggtaaggtctttccggattgggacgagcgggaacttggt
gtcggtgagaagcttctcataaaggccgtttctaaggctactggcatcccggagaaggaa
atagaaaactccatcaaagacacgggtgatctgggcgagagcgtggctctggcattgaag
aaaaagaggcagaagagcttcttctcccagccgctcactataaagcgcgtctacaagacc
tttgtcaagatatccgaggcgagtggcgaagggagccaggacaggaagctaaaatacctc
gccaacctcttcatggacgccgaggctgaggaaggaaaatatctggccagaactgtcctt
ggaacaatgaggaccggtgtcgccgagggaattctgagggatgcgatagccgaggccttc
aaggtcaaggcggagttagttgagcgcgcctacatgctcactagcgacttcggctacgtg
gcgaaggtatccaagcttgagggcaacgagggtctttcaaaggttcagatccagataggt
aagccgataaggccgatgctggcccagctggcggcaaacgtcaaagaggccttaatcgag
atgggcggtgaagcggcgtttgagataaagtacgatggggcgcgagttcagatccacaag
gacggcgatacggttgtagtctactcccgcaggctggagaacgtcacacgttcaatccca
gagatggttgaggcgataaagtcccatataaaggcggaaaaggcgatagtcgagggcgaa
ctggtggcggtcggggacggcggccgtccaaggcccttccagtacgtgctcaggcgcttc
aggaggaagtacaacatagaggagatgatagagaaaatccctctggagctgaatctcttt
gacgccctatacgttgacggggaagggcttatagacgttcaattccgggagaggagagcc
aggctcgaggaaattgtcgaggaaagtgggaaggttaagctcgcccagcagctcgtcacg
aagaacccggaggatgcggaggagttttacaagcgagcccttgagctcggtcacgagggg
ctcatggcgaagcgcttggattccgtctacgagcctggaaacaggggcaagaagtggctc
aagataaagccgacgatggagaacttagacctcgtcatcgtaggtgcggagtggggtgag
ggaaggcgcgcccatgtacttggctcgttcctagttgccgcctatgacccagagcagggc
cgctttgttcccgttggaaaggtgggtagcggcttcacggatgaggatctggtcgagttc
accaagatgctcaaacccctcatagtcaaggaggagggcaaatacgtcgagatagagccc
aaggtggtcgttgaggtaacttaccaggagatacagaagagcccgaagtatgagagcggc
ttcgctttgcgcttcccgcgctacttggccctgagggaagacaagggtccagaagaggcc
gatactctggagcgcatcgcccagctctacgagttccaggagaggttcagggcaaagagg
tga

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