Treponema pallidum subsp. pallidum SS14: TPASS_1012
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Entry
TPASS_1012 CDS
T00716
Symbol
sigA
Name
(GenBank) RNA polymerase sigma-43 factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
tpp
Treponema pallidum subsp. pallidum SS14
Brite
KEGG Orthology (KO) [BR:
tpp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpp03021
]
TPASS_1012 (sigA)
Transcription machinery [BR:
tpp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TPASS_1012 (sigA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
ACD71428
UniProt:
A0A0H3BJS3
LinkDB
All DBs
Position
complement(1104485..1105420)
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AA seq
311 aa
AA seq
DB search
MLSIWYVPFEQKEYSVRQMQFRHDENTLTAYLNDLKRIPLMNEKEEYACACAAYAGDAQA
KNALVRANVRFVISVARHYRTCGLPLADLISEGNIGLLTAAERFNPARGCRFISYAACWI
RQSILKALNEKARIIRLPVSRIRAAKSTYEYIPPVTSVNVGISKTQGGNRYGKRRATMCR
AVPTVEEVHIWHTPLSLDAPLGASGSRGESGDVDGLRIGDCVPDDLYAQPEEHMLACALQ
ADIAKILRLLPARDAQVIRYRFGLGGYERRSLQEIGEIFQITKERVRQIEKKALLRIRSC
ARQHRLDSYIA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
ttgctgagtatatggtacgtacctttcgaacaaaaggagtactctgtgagacaaatgcag
ttccgccacgatgagaatactctcacggcatatttgaatgacctgaaacggataccgctc
atgaacgaaaaggaagaatatgcatgtgcatgtgctgcctatgccggggatgcgcaagct
aaaaacgcgctcgtgcgtgcaaacgtacgctttgttatcagtgttgccaggcattaccgc
acgtgtggcttaccccttgccgatcttatcagtgaaggcaatattggtcttttgacggct
gccgagcggttcaatccagcaagggggtgtcgctttatttcttacgctgcctgttggatt
cgccagtctatcctcaaggcactgaacgaaaaagcacgcatcatccggttgcccgtgagt
cgtattcgtgctgcaaagagcacgtatgagtacatacctcctgttacctcggtgaatgtt
ggtatatcgaaaacacagggaggcaacagatatggcaaaaggcgtgcaacgatgtgccga
gctgtgccaacagtggaagaagttcacatctggcacacgccgctatctctagatgctccg
cttggagcctcgggaagtcgtggtgagtctggggatgttgatggactgcgtataggtgac
tgcgtgccggacgatctttacgcgcagcctgaggagcatatgcttgcatgtgcattgcaa
gctgatattgcaaagattttacgacttttgcctgcgcgtgatgcgcaggtcatccgctat
cgatttggacttggcgggtatgaacggcgttctctgcaagagattggagaaatttttcag
ataacaaaggagcgcgttcgccaaatagaaaaaaaggctttgttgcgtatccgtagctgt
gcccgtcaacacagactggattcctacatagcgtag
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