Tsukamurella paurometabola: Tpau_0754
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Entry
Tpau_0754 CDS
T01228
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
tpr
Tsukamurella paurometabola
Pathway
tpr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tpr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tpau_0754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpr03021
]
Tpau_0754
03400 DNA repair and recombination proteins [BR:
tpr03400
]
Tpau_0754
Enzymes [BR:
tpr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Tpau_0754
Transcription machinery [BR:
tpr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Tpau_0754
DNA repair and recombination proteins [BR:
tpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Tpau_0754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Caldesmon
TarH
Motif
Other DBs
NCBI-ProteinID:
ADG77391
UniProt:
D5UTN7
LinkDB
All DBs
Position
769249..773205
Genome browser
AA seq
1318 aa
AA seq
DB search
MLDVNFFDELKIGLATADDIRNWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITEVDEEQRHNEQSTLEAEIESEKKVLADQRDVDLENRAKKLEDD
LAVLEAEGAKADQRRKVKDGGEREMRQIRDRAQRAIDELDEIWTTFVKLAPKDMIVDEKL
YRELQDRYGEYFKGAMGAEAIKKLIENFDIDAEAEILREVIRSGKGQKKLRALKRLKVVA
AFQQSGNSPLGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLYHLTTEKADAQGAYT
AAKKDQPETGVYSSPAEAIMAVDLGELSIQAPIKVRLTNQRPPAEIEAEQFDGAWERGQA
WTAETTLGRVLFNELLPIDYPFVDEQMPKKRQAVIINDLAERYPMIVVAQTVDKLKDSGF
YWATRSGVTVSMSDVLVPPSKKEILDRYEERADGIERKYARGALTSGERRDALVEIWKQA
TDEVGKAIDDYYPEDNPITMIPKSGATGNMTQVRNLAGMKGLVTNPKGEFIPRPIKSSFR
EGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVRETDCNTTRGIIVPL
AEVQADGSLIRDAHVETSAYARTLAEDAKDAKGNVIVERGHDLGDPQIEALLEAGIAEVK
VRSVLTCTTGTGVCATCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGVG
DDITGGLPRVTELFEARVPKGKAPIAEVSGRIRLEDDDRFYTITITPDDGSEEVVYDKIS
KRQRLRVFKHDDGTERLLADGDHVQVGQQLLEGAADPHEVLRVMGPRQVQVHLVNEVQEV
YRSQGVSIHDKHIETIVRQMLRRVTIIDSGSTEFLPGSLTERAEFEAENRRVVAEGGEPA
AGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINTRSDKLVGLKENVIIGKLIPAG
TGINKYRNIQVQPTEEARAAAYSVPTFDDQYYGPEGAFGAPSGAAVPLDDYGFSDGYR
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgttaacttcttcgacgaactgaagatcggtctggcgaccgccgatgacatc
cgtaactggagctacggcgaggtcaagaagcccgagaccatcaactaccgcacgctcaag
cccgagaaggacggcctgttctgcgagaagatcttcggacctactcgagactgggagtgc
tactgcggcaagtacaagcgtgtccgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtcactcgcgccaaggtgcgtcgtgagcggatgggccacatcgagctcgcggctccg
gtcacccacatctggtacttcaagggcgttccctcgcgcttgggctacctgctggacctg
gcgcccaaggatctcgagaagatcatctacttcgccgcctacgtgatcacggaggtcgac
gaggagcagcggcacaacgagcagtccacgctcgaggccgagatcgagtccgagaagaag
gtcctcgcggaccagcgggacgtcgatctggagaaccgcgccaagaagctggaggacgat
ctggccgtcctcgaggccgagggtgccaaggccgaccagcgccgcaaggtcaaggacggc
ggcgagcgggagatgcggcagatccgcgaccgcgcgcagcgtgccatcgacgagctcgac
gagatctggacgaccttcgtcaagctcgcgccgaaggacatgatcgtcgacgagaagctc
taccgtgagctgcaggaccgctacggcgagtacttcaagggcgccatgggtgccgaggcg
atcaagaagctcatcgagaacttcgacatcgatgccgaggccgagatcctgcgcgaggtc
atccgcagcggcaagggccagaagaagctgcgtgcgctcaagcgactgaaggtcgtggcg
gcgttccagcagtcgggcaactcgccgctgggcatggtcctggacgcggtgccggtgatc
ccgccggagctgcgcccgatggtccagctcgacggtggccggttcgccacgtccgacctg
aacgacctgtaccgccgtgtgatcaaccgcaacaaccgcctcaagcgactgatcgatctg
ggtgcgcccgagatcatcgtcaacaacgagaagcggatgctgcaggagtcggtcgacgca
ctgttcgacaacggccgtcgtggccgtccggtcaccggaccgggcaaccgcccgctgaag
tcgctgtccgatctgctcaagggcaagcagggccggttccgtcagaacctgctcggtaag
cgcgtggactactcgggccgttcggtgatcgtcgtgggtccgcagctcaagctgcaccag
tgcggtctgccgaagctgatggcgctcgagttgttcaagccgttcgtgatgaagcgcctg
gtggatctgaaccacgcgcagaacatcaagtcggccaagcgcatggtcgagcggcagcgc
ccgcaggtgtgggacgtcctcgaagaggtcatcgccgagcaccccgtgctgctcaaccgt
gctcccacgctgcaccgcctgggcatccaggcgttcgagccgcagctcgtggagggcaag
gccatccagctgcacccgctcgtttgtgaggccttcaacgccgacttcgacggtgaccag
atggccgtgcacctcccgctgtccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctctcgcccgcgtcgggtcgtccgctcgccatgccccgtctggac
atggtgaccggcctgtaccacctgaccaccgagaaggccgatgcgcagggcgcctacacg
gcggccaagaaggatcagccggagacgggtgtctactcgagcccggccgaggccatcatg
gcggtcgacctgggcgagctgtcgatccaggcgccgatcaaggtgcggctgacgaaccag
cgtccgccggccgagatcgaggccgagcagttcgacggtgcgtgggagcgcggtcaggcc
tggacggccgagaccacgctgggccgggtgctgttcaacgagctgctgccgatcgactac
ccgttcgtcgacgagcagatgccgaagaagcgtcaggccgtgatcatcaacgatctggcc
gagcggtacccgatgatcgtggtggcgcagaccgtcgacaagctcaaggactccggtttc
tactgggccacgcggtccggtgtcacggtctcgatgtccgacgtgctcgttccgccgagc
aagaaggagatcctcgatcgctacgaggagcgggccgacggtatcgagcgcaagtacgcc
cgcggtgccctcacctcgggtgagcgtcgcgacgccctcgtcgagatctggaagcaggcc
accgacgaggtcggtaaggcgatcgacgattactaccccgaagacaacccgatcacgatg
atcccgaagtcgggtgccacgggcaacatgacccaggtgcggaacctggccggcatgaag
ggcctggtgacgaacccgaagggtgagttcatcccgcgcccgatcaagtcgtccttccgc
gagggcctcacggtgttggagtacttcatcaacacccacggtgctcgtaagggtctggcc
gataccgcgctccgtaccgccgactcgggttacctgacccgtcgtctggtggacgtctcg
caggacgtcatcgtccgcgagaccgactgcaacaccacccgtggcatcatcgtgccgctg
gccgaggtgcaggccgacggttcgctgatccgcgatgcgcacgtcgagacctcggcgtac
gcccgcaccctggccgaggacgccaaggatgccaagggcaacgtcatcgtcgagcgcggt
cacgacctgggtgatccccagatcgaggccctgctcgaggccggcatcgccgaggtgaag
gtgcgctccgtgctcacctgcaccaccggcaccggcgtgtgcgccacctgctacggccgc
tcgatggccaccggcaagctcgtcgacatcggcgaggccgtcggtatcgtcgccgcgcag
tcgatcggtgagcccggtacccagctgaccatgcgtaccttccaccagggtggcgtcggt
gacgacatcaccggtggtctgccgcgagtcaccgagctgttcgaggcccgtgtccccaag
ggcaaggctccgatcgccgaggtctccggccgcatccgcctggaggacgacgaccggttc
tacacgatcaccatcacgccggacgacggcagcgaagaggtcgtgtacgacaagatcagc
aagcgtcagcgcctgcgtgtgttcaagcacgacgacggcaccgagcgtctgctggccgac
ggtgaccacgtgcaggtgggtcagcagctcctcgagggcgctgccgatccgcacgaggtg
ctgcgcgtcatgggcccgcgtcaggtgcaggtgcacctggtcaacgaggtccaggaggtg
taccggtcgcagggtgtgtcgatccacgacaagcacatcgagaccatcgtgcggcagatg
ctgcgtcgcgtgacgatcatcgactcgggttccacggagttcctgcccggttcgctcacc
gagcgtgccgagttcgaggccgagaaccgtcgcgtcgtggccgagggcggcgagcccgcg
gccggccgtccggtgctcatgggcatcaccaaggcctcgctcgcgaccgattcgtggctg
tcggcggcctccttccaggagaccacccgcgtgctcacggacgccgcgatcaacacccgc
tccgacaagctggtgggcctcaaggagaacgtcatcatcggtaagctcatcccggccggt
acgggtatcaacaagtaccggaacatccaggtgcagcccaccgaggaggcccgcgcggcc
gcgtactcggtgccgaccttcgacgatcagtactacggtccggagggtgcgttcggcgcc
ccgtccggcgccgcggtgccgctcgacgactacggcttctccgacggctaccggtga
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