Tsukamurella paurometabola: Tpau_2277
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Entry
Tpau_2277 CDS
T01228
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
tpr
Tsukamurella paurometabola
Pathway
tpr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Tpau_2277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpr03400
]
Tpau_2277
Enzymes [BR:
tpr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Tpau_2277
DNA repair and recombination proteins [BR:
tpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Tpau_2277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ADG78885
UniProt:
D5UQB5
LinkDB
All DBs
Position
2370677..2371552
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AA seq
291 aa
AA seq
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MTVATFNVNGIRAARRRGFDSWLAGRGADIVALQELRCPPDAVGDFAGYHAAIDCGSIPG
RNGVAILTREPAAAVRSWAEHPPRARGLREYAHEGRYIEADLAEAPLTVACLYLPKGGLP
AHLQRPGTLRDVPDGGAKYQRKMRFLAAFARELDRNRRAAHARGREFLLLGDLNLAHLPH
DVTNWRPAQKMEGFLPEERAWLDARLGPRTLVDVVRRLHGDRPGPLSWWSWAGASFTKNV
GWRIDHHLASPGLAATAVSVVVDKEARADARLSDHAPVVVDYAFPAGPHGR
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
ctgaccgtcgcgacgttcaacgtcaacgggatccgcgcggcacgacgacgcggcttcgac
tcctggctcgccggccgcggggccgacatcgtcgcgctgcaggaattgcggtgcccaccg
gacgcggtgggcgacttcgcggggtaccacgcggcgatcgactgcggatcgatcccagga
cgcaacggcgtcgccatcctcacgcgggaaccggctgccgcggtccggagttgggccgaa
catccaccgcgggcccggggcctgcgcgagtacgcgcacgagggccgctacatcgaggcc
gatctcgcggaggcgccactcaccgtggcctgcctgtacctgccgaagggcggcctaccc
gcacacctgcagcggccgggcaccctgcgcgatgttcccgacggcggcgccaagtaccag
cgcaagatgcggttcctcgcggccttcgcccgggaattggaccgcaatcggcgagccgcg
catgcacggggccgggaattcctcctgctcggcgacctgaatctggcgcacctgccgcac
gacgtcacgaactggcgacccgcgcagaaaatggagggattcctccccgaagaacgcgca
tggctggacgcgcggctcgggccccgcacgctggtcgacgtggtgcggcggctgcacggc
gaccggccgggcccgttgtcgtggtggagttgggccggagcatcgttcaccaagaacgtc
ggctggcgcatcgaccaccacctcgcctcccctgggctggccgcgaccgcggtgtcagtg
gtggtcgacaaggaggctcgtgcggacgcgcggctctccgatcatgcgccggtggtcgtc
gactacgccttccccgcgggcccccacggtcggtag
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