Thalassiosira pseudonana: THAPSDRAFT_10470
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Entry
THAPSDRAFT_10470 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
His_Phos_1
Motif
Other DBs
NCBI-GeneID:
7450029
NCBI-ProteinID:
XP_002296744
JGI:
10470
UniProt:
B8LCR3
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Position
16
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AA seq
1248 aa
AA seq
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MLQQWQQGPASGLVDEIKLVPNDAVNVDVSKWISALKSNLHSIRKDNSRVMLLNDSFLLV
RNTPELWNDACGGVCGLVWTASRKDTTRHIQSYIRTLSSCEVDNYIEFYERNQHSQNVQE
LIQKFEVNLDWVHGNVGALFHYAGGHPDADTAQKVLLTHGYPAIKLKKFFETNDPWSHEE
EGVRERISPAFEAEVYRRVNHDLNHLSDEKLEEHFEVLGYKEGRIYSRLPLKIKDWMREE
LVSMDATSTSDGSVGERTLALLEDYLEALNAANEKASQVVNNTTDILNSTIGLDLSLVAI
AASTVIQQLHPHILRVEITSIDNIVATRSEEVHDPSRRILQAELFADATNTDTNTTSNNN
TNSPISYPSASMLLTPNDPIESNSDELINTTNLLLTDLSVAPSHSPSPTQSATTHFPTKI
NPTVIHTGPHFWDPISPPDLYAPDVYGYPRNYPPTLSPRVYGKNSEEDTDFKEFIAFVGW
YAFLIVCCLLPTACAYHRRRRNARVMRESAENLQNRLEEIDRMGGLDRILEGTSGNAYGF
RGEGLDLGENRSRDWEFLEQLFGSIGGGGGGNEAPPGSVLSRRRVIMSDILGGMSVRMLV
EREERRKRERGRRLVAALKESSMEVTEHHLIPKYDATAQYVDTSQQLIDRDIIDGDIEMG
PLSVDESKRLGNDNQSKNKEDEKHSCENDDAGALPNDASSDDTPIDLESDISDTKPKANQ
TLDQSENDNSEPNADTSVSLSAQEATELQGASGDIEHQTSDAVPRSIPSNNLSSHYEVDQ
AAYIDDYDDNPYSALCLPCSPTSNTTTLDTTTSLAQSPPQSTHLFSSRARRAVCHSKHNL
TGRTIRPHPRPLQPTSNRHCSHMVIIPRLLLSIAAVAPTNGVAAFAFGTRLTGNVIKRAH
RMNSSNTSTSTCLTATTGKEICETTITEQGKSSILCTVPEIDSKSSLWSDVAINAAKQFT
ISQRQKLYDLGALDVHRSVQIVGECVSKECSLGDCVLDDGNDEKSDKDDSFPTATSTSDT
KIIHFQRHGQGYHNLICDMWREAGKPIDFDSSDPNLNPVVRPEFLDPPLTALGMQQCSSQ
RGLCASLNPELVIVSPMLRCIQTARLSFRDHRNDAEGREVPWVSHEGCREELGLLQGNKR
RPIDEIQADYPDIDFSPIKHNEDVLWNEYGTRRETLMEKSERIYSFLTEYVRSRPEKEIA
IICHSAYLFTLLNAVMDVEKEELRSWFLTSEVRSLKMTFVNREEGTAK
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgctacaacaatggcagcaaggccctgcctccggactagtggatgaaatcaaactagtc
ccaaatgacgctgtcaacgtggacgtatccaaatggatctccgccctaaagagcaatcta
cactctatccggaaagacaattcacgagtcatgctgctcaatgattccttcctcctcgta
cgaaacacacctgaactttggaacgatgcctgcggaggagtatgcggtctagtgtggact
gcttcccgaaaggacaccacacgtcacatccaatcatacattcgcaccctttcatcttgt
gaggttgacaactacattgagttttacgaacgtaatcaacactcccagaatgtgcaagag
ttgattcaaaagtttgaggtgaatttagactgggttcatgggaatgtgggtgcattgttt
cattatgcaggaggacatccggatgcggatacggctcagaaggtgctgttaacgcatgga
tatcctgccatcaagttgaagaaattctttgagacgaatgatccatggagtcatgaggag
gagggtgtgagggagaggatatctccggcttttgaggcagaggtttatagaagggtgaat
catgatttgaatcatttgagtgatgagaagttggaggagcattttgaggtgttggggtat
aaagagggaaggatatactcgcggttgcctttgaagattaaggattggatgagggaggag
ttggttagtatggatgctaccagtacgagtgatggaagtgtaggggagaggactttggca
ttgttggaagactatttggaggctttgaatgctgctaatgaaaaggcttcacaagttgtc
aacaatacgacagatattctcaattcaacgattgggttagatttgtcgctagttgcaatc
gccgcttctactgttattcaacaactgcatccacacatattaagggtggaaattacgagt
attgataacattgtcgccaccagaagtgaagaggtacatgacccatcacgaagaatactg
caagcagaactttttgcagacgcgacaaacaccgacacaaatacaacctccaacaacaac
acaaactctccaatatcatatccatccgcatcgatgctcctaacacccaacgatccaata
gaatcaaactcagatgaactcattaacactaccaatctgctcttgacggatctatccgtg
gctccatctcactcgccgtcaccaactcaatccgctacgactcatttcccaacaaagatc
aaccccacagtaatccacaccggacctcacttttgggatccaatctcccctcccgacttg
tacgctcccgacgtgtacggctatccaaggaactacccaccaacgctttctcccagagtt
tacggcaaaaattcagaagaagataccgatttcaaagagttcattgcttttgtaggctgg
tatgcattcttgatagtttgttgtcttcttccaactgcgtgtgcttatcatagaaggagg
aggaatgcaagagtaatgagggagagtgcagagaatttgcaaaatagactggaggagatt
gatagaatgggtggattggataggatactggaagggacgagtggaaatgcctatggattc
aggggagaggggttggatctaggcgagaatcgcagtcgagattgggagtttttggaacag
ttgtttgggtctattggtggtggcggaggtggtaatgaggcgccgccggggtcggttttg
agtcggagacgagtcatcatgagtgatatcttgggaggaatgagtgtgagaatgttggtg
gagagggaggagagacgaaagagggagagggggagaagattggtcgctgctctgaaggag
agctcaatggaggtgacagagcatcatctaataccaaagtacgatgcaactgcccaatat
gtagacacatctcaacaacttattgatagggatataattgacggtgatattgaaatggga
cctttgtctgtcgatgaaagcaaaaggcttggcaacgataaccaaagcaaaaataaggaa
gacgagaagcattcttgcgagaatgatgatgctggtgctttacctaacgatgcttcttca
gatgacacaccaatagacctagagagcgatatcagtgatacgaagcctaaggccaatcaa
acactggatcaaagcgaaaacgacaacagtgaaccaaatgccgatacttcagtctcgttg
tcagcccaggaagcaacagaattacaaggtgcatctggtgatatagagcaccaaacttcg
gatgcagtgccacgaagtattccaagcaacaacttatcttcacattacgaagttgaccaa
gcagcatacattgatgattacgacgacaacccttacagtgctctctgcctgccatgttca
ccaacctcaaacacaaccacactcgatacaacgacatctctcgcgcaatcaccaccacaa
tctacacatcttttcagtagcagggcgagacgagctgtttgtcactcaaaacacaacttg
acgggacgcacaattcgcccgcatccccgcccccttcaaccgacgtccaaccgtcactgc
agccatatggtcatcattcctcgtctcctccttagcatagcagcagtagcaccaacaaat
ggagttgcagcgtttgcctttggaacaaggctgacaggcaacgtcatcaaacgagcgcat
cgcatgaactcttccaacacctccaccagcacctgcctcaccgccaccaccggcaaagag
atatgcgaaaccaccataacagagcaaggcaaatcatccatactatgcacagtccccgaa
atcgactccaagtcctctctctggagcgatgtggccatcaatgcagcgaaacagtttacg
ataagccagcgtcaaaaactatacgatctcggtgcattggatgttcaccgatcggtacag
attgttggtgagtgtgtttcgaaggagtgcagtttgggagattgtgtgttagatgatggg
aatgacgagaagagtgacaaagatgattcgtttccaactgcaaccagtacatcggacaca
aagatcatacacttccagcgacatggacagggatatcacaaccttatatgcgacatgtgg
cgagaagctggcaaacccatcgactttgactcgtccgatcccaacctcaacccagttgta
agaccggagtttttagatcctccactgacagcgttggggatgcaacaatgtagtagtcaa
agggggctatgtgctagtttgaatcctgagttggtgattgttagtccgatgttgaggtgt
attcaaactgcgaggttgtcgtttcgggatcatcgaaatgatgcggaggggagagaagta
ccgtgggtatcgcatgaggggtgtcgtgaagagctgggacttttgcaaggaaacaagaga
cgacctattgatgagattcaagctgattatcctgacatcgacttctcgccaatcaaacac
aacgaagacgtcctatggaacgaatacggcacaagacgggaaacactcatggaaaagtca
gagaggatctacagcttcctaaccgagtacgtgcgatcacgtccagagaaggagattgca
attatttgtcactcggcgtatctgtttacgttgttgaatgcagtgatggatgtggagaaa
gaagagttgaggagttggtttttgacgagcgaagtaagatcgttgaagatgacgtttgtg
aacagagaggaagggaccgccaaataa
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