Thalassiosira pseudonana: THAPSDRAFT_22546
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Entry
THAPSDRAFT_22546 CDS
T01078
Name
(RefSeq) predicted protein
KO
K03217
YidC/Oxa1 family membrane protein insertase
Organism
tps
Thalassiosira pseudonana
Pathway
tps03060
Protein export
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
THAPSDRAFT_22546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tps03029
]
THAPSDRAFT_22546
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
tps02044
]
THAPSDRAFT_22546
Mitochondrial biogenesis [BR:
tps03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
THAPSDRAFT_22546
Secretion system [BR:
tps02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
THAPSDRAFT_22546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
60KD_IMP
Motif
Other DBs
NCBI-GeneID:
7447268
NCBI-ProteinID:
XP_002290516
JGI:
22546
UniProt:
B8C1R9
LinkDB
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Position
5:complement(207874..209571)
Genome browser
AA seq
446 aa
AA seq
DB search
MKSHALLLALSAPTSLHAFAPPSLKASHHAFTSKLSMVDPSMLAHHDITPHVETINNFFS
SLVLSDLNVDSVTSVAAPVQPLGASPSPEATKAAIEAVTASSADPNAQNGWFGFLTLPIE
GLLKLIHGGLDSMGMSSNAWGISIIAMTVVIKALTFPLTKSQLESTNKMQALQPTIKSLQ
AKYQSNPEVMNQKIAEVYQTNEVNPLAGCIPSLVQIPVFIGLYRAVLNLAKENALDEPFL
FLPNLEGPTYGADPAHGSDWLFKNWVDGVPGLGWEDTIAFLSIPVFLTISQVISMNMMQP
KTDDPQQQQANVILKVLPFMIGWFALNVPAALGVYWVVNNIVTTATTLYVRNSMPKPDVS
SVGGGAAGASVMEARTTDFNPTPMNERAVGFGGSSSDSGNSMKTITPIDAEIVGDDEGME
VLGDGPDIPGAPQSKGKRGKKKKRRN
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcacacgccctccttctcgcactatctgcaccgacctccctccatgcttttgcc
cctccctccctcaaagcaagtcaccatgccttcacatccaaactatccatggtcgacccc
tccatgttggcacatcacgatatcaccccacacgtcgagacaatcaacaacttcttctcc
tccctcgtgctctcagatctaaatgtagacagtgtcacctctgttgcagctccagtacaa
ccgctgggagcctctccctcccccgaagcaaccaaagcagccatcgaggcagtcactgct
tcttcagcggatcctaacgcacaaaatggatggtttggatttctaacccttccaattgag
ggattgctcaagcttattcatgggggtttggattcgatgggaatgagttccaatgcttgg
ggaattagtatcattgccatgactgttgttattaaggctttgacctttccgttaacgaag
tctcagttggagagtactaataagatgcaggcactccaaccaacaatcaaatccctccaa
gctaagtaccaatccaaccccgaagtaatgaaccaaaaaatcgctgaagtttaccaaaca
aacgaagtcaaccccctcgccggatgcatcccctcccttgtccaaatccccgtcttcatt
ggtctctaccgtgccgtattgaacctggcaaaagagaatgcacttgacgagccgtttctt
ttcttgcccaatttggaaggaccaacgtacggtgctgatcccgcccatgggagcgattgg
ctcttcaagaattgggtcgatggtgtacccggtctaggatgggaggatactattgccttc
ctctctattcccgtctttttgaccatttcacaggtgatttcgatgaatatgatgcagccc
aagacggatgatcctcagcagcaacaggccaatgtgattctcaaggtgttgcctttcatg
atcggatggtttgctttgaatgtgcctgctgctttgggtgtgtattgggtggtgaataac
attgtgaccacggcgactacgttgtatgtgaggaattcgatgccaaagccagatgtgagc
agtgtgggaggtggagcagccggtgcaagcgttatggaggcgaggactacggatttcaat
cctaccccaatgaatgaacgtgctgttggatttggtggaagtagttctgattcggggaat
tcgatgaagactattacacctattgatgcagagattgttggggatgacgagggtatggaa
gttttgggagatggacctgacattcccggcgctcctcagagtaaaggaaaaaggggcaag
aagaagaagaggagaaactaa
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