KEGG   Thalassiosira pseudonana: THAPSDRAFT_31822
Entry
THAPSDRAFT_31822  CDS       T01078                                 
Name
(RefSeq) hypothetical protein
  KO
K12862  pleiotropic regulator 1
Organism
tps  Thalassiosira pseudonana
Pathway
tps03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    THAPSDRAFT_31822
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tps03041]
    THAPSDRAFT_31822
   03400 DNA repair and recombination proteins [BR:tps03400]
    THAPSDRAFT_31822
Spliceosome [BR:tps03041]
 Complex B
  Other components
   Prp19 complex
    THAPSDRAFT_31822
 Complex C
   Prp19-CDC5 complex
    THAPSDRAFT_31822
DNA repair and recombination proteins [BR:tps03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    THAPSDRAFT_31822
SSDB
Motif
Pfam: WD40 NBCH_WD40 ANAPC4_WD40
Other DBs
NCBI-GeneID: 7450404
NCBI-ProteinID: XP_002287354
JGI: 31822
UniProt: B8BUP9
LinkDB
Position
2:1282134..1283255
AA seq 340 aa
PTPKWHSPWKLSTVLSSHLGWVRSVAFDPTNTLFATGGSDRVIKIFDLAKACVAAPDALK
ITLTGHISPVRGLAFSDRHPYLFSAGEDKMVKCWDLETNQVIRHYHGHLSGVFALKLHPT
LDLLVTGGRDAVARVWDMRTKHQVHCLSGHDNTVGAILTKGTDPQIVTGSYDTTIKLWDL
AAGKCMSTLTHHKKAVRALAQPSFENTFVSGAADNLKKWVGNDGRFIKNFTGHKAVINAL
AVNDDGILLSAADDGTMNFWDYGSGHCFQTSTTVAQPGSLDAENGIFAAEFDLTGTRLVT
CEADKTIKIWKEDDTASELTHPIDMTKWRKKCIAEAKRRY
NT seq 1023 nt   +upstreamnt  +downstreamnt
cccacgcccaaatggcactcaccatggaaactatccaccgtcctctcctcccacctcgga
tgggtccgttccgtcgccttcgaccccaccaacaccctcttcgccacgggagggtccgat
cgcgtcattaaaatattcgatctcgccaaagcctgcgtggcagcaccggatgcattgaaa
attaccttaacgggtcacatcagtccggtgcgcggattggcattttcggatcgacatccg
tatttgttttcggcgggggaggataagatggtgaaatgttgggatttggagacgaatcaa
gttattaggcattatcatggtcatttgagtggagtgtttgctttgaagttgcatccgacg
ttggatttgttggtgacgggtggtagggatgcggtggcgagggtttgggatatgaggacg
aagcatcaggttcactgtttgagtgggcatgataatacggtgggagctattttgaccaag
gggactgatccacagattgtcactggatcgtacgataccaccatcaaactgtgggacttg
gcagcaggcaaatgcatgtcaacgctcacacaccacaagaaggccgttcgtgcattggca
caaccttcgtttgaaaacacgttcgtctcgggagcagcggataacttgaagaagtgggtg
ggcaacgacggtcgttttattaagaacttcactgggcataaagcagtcatcaatgcactc
gcagtaaacgacgacggtattctcttgagtgctgccgatgatggaacaatgaacttttgg
gattacggatcgggacactgctttcaaacatccaccactgtggcacaaccgggtagtttg
gatgcggagaatggtatctttgcggcggagtttgacttgacggggactcggctcgtcact
tgtgaggctgataaaacaatcaagatttggaaagaggacgatacagcatcggagttgact
catccgatagatatgacgaagtggaggaagaagtgtattgcggaggcgaaacgtcggtat
taa

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