KEGG   Thalassiosira pseudonana: THAPSDRAFT_35818
Entry
THAPSDRAFT_35818  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K07897  Ras-related protein Rab-7A
Organism
tps  Thalassiosira pseudonana
Pathway
tps04144  Endocytosis
tps04145  Phagosome
tps04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:tps00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    THAPSDRAFT_35818
   04145 Phagosome
    THAPSDRAFT_35818
   04148 Efferocytosis
    THAPSDRAFT_35818
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tps04131]
    THAPSDRAFT_35818
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tps04147]
    THAPSDRAFT_35818
   04031 GTP-binding proteins [BR:tps04031]
    THAPSDRAFT_35818
Membrane trafficking [BR:tps04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    THAPSDRAFT_35818
Exosome [BR:tps04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   THAPSDRAFT_35818
  Exosomal proteins of other body fluids (saliva and urine)
   THAPSDRAFT_35818
  Exosomal proteins of colorectal cancer cells
   THAPSDRAFT_35818
  Exosomal proteins of bladder cancer cells
   THAPSDRAFT_35818
GTP-binding proteins [BR:tps04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    THAPSDRAFT_35818
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU AAA_16 RsgA_GTPase TniB Gtr1_RagA AAA_22 NACHT AAA_24 Septin PduV-EutP SRPRB AAA_7
Other DBs
NCBI-GeneID: 7443464
NCBI-ProteinID: XP_002291954
JGI: 35818
UniProt: B8C6H4
LinkDB
Position
8:complement(204310..205180)
AA seq 190 aa
KKHMLKLVILGDSGVGKTSLMNRYHSNKFTGQYKATIGADFLSKHVSITDPQTGSIRNVT
LQIWDTAGQERFQSLGVAFYRGADAVALVYDVGDAKSFDHLENWRGEFLKQVGLDERGGG
GGAGFPFVLLGNKIDRPEGERRVPRQLAEEWCERAGLGGEMGGGPIPHFEVSAKTSDNVE
GAFLELATLA
NT seq 570 nt   +upstreamnt  +downstreamnt
aagaagcacatgttgaagttggttattttgggagattcaggagtcggcaaaacatcccta
atgaatcgctaccactccaacaaattcacgggacaatacaaagccacaatcggagccgac
ttcctctccaagcacgtttccataaccgatcctcaaaccggatccatacgcaacgttacc
ctccaaatatgggatacagctggtcaagagaggtttcaaagtttgggtgtcgcgttttat
agaggtgccgatgccgtggcgttggtgtatgatgtgggtgatgccaagagttttgatcat
ttggagaattggaggggagagtttttgaaacaggttggattagatgaaagaggtgggggt
ggtggtgctggatttccgtttgtattgttaggaaacaagattgatagaccggagggggag
aggagagtgcctcgtcaactagcggaggagtggtgtgaacgtgctggactcggtggagag
atgggaggaggacctattccgcactttgaagtgtcggcaaaaacttcggacaatgtggaa
ggggcgtttttggagttggcaacactggct

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