Thalassiosira pseudonana: THAPSDRAFT_9491
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Entry
THAPSDRAFT_9491 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
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Gene cluster
GFIT
Motif
Pfam:
Drc1-Sld2
Nab6_mRNP_bdg
WDCP
Motif
Other DBs
NCBI-GeneID:
7447827
NCBI-ProteinID:
XP_002293390
JGI:
9491
UniProt:
B8CBH0
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Position
13:553795..557205
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AA seq
1136 aa
AA seq
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MRPNGMPARRRRLSKGLIAGASSDTARSEEKNAAASPGPIQSPNDNVPEKSAAPSLPSAC
YSGRLAAVCAQNALQLGLVAKYALCPQGKARKTLLARAKNKRHRSRTSGRTDADPVADAH
ERAEEEFMNNPAGADLAEYSSGDDDDFDASVEDDEGWAKGVTAANLAAACKEPLFIPTGT
DAASMGLQGGQAAGAGRLPFNYRKLRFFDVVTASDRAVARDFLRSEIANAKKLRSTALSN
HLRKAQLKERERIENEAKGVAPSHTLTTTNDSDMVDEVDLQAEQTALATALTRFPQELTP
TMSASLLIESLAMNHHESIEGMARCYDGIVSAGTALLDIANETSRDSKSKLTTSEIMVAL
APLLITTLEQPSGEAIVELAKLRNFCGTKRYQRRFVQRIAPFLVRPSDAAIWCLRHQTDI
EPIMAAVEMILDNAADVFSSGWFERGRNMLKDTQRAEKLRLAASQLRCLNSPSPVDGLFA
SLSSLGGSHRRGSLFGGSVSKKESQGIGDESMAEWEVLAIDMHIRQSVLDVFSKDWSRIS
SLNLSPKESDTSSYGSRQRRGISATKSKTAEWQHDTTGPSMSASSLTKSPRSKIPLSPRG
GVATPLSASTAGSSQVPSADALESTFGPSFSSQVIEDDGFAALSSTNHSTSAPLSPKRAA
SSKLTTPKTPPTKHDFRNDEPSSPGGRDPSRIGLAPLSPQSSVGNASASTMSQRSMSVGQ
RGSKDQYRALTSTAAERKRTVAACRALRAQITKFEEAFIQMHGRAPKGAAEREPLASTYM
QYREWKRAIRTDAACRIQALCRGSSVRSMMLRSHDVRVSRIVSRRSVKPTLVERRTSDLS
HLSIPLDIGTNPVQSSILDHVAKTRLEARGGLRGDDGVEVVMRSGSATTSSAIPPSVAPN
WKNRQQVGHSGGDSPGSSFNQRPSPGKPRNSQPDVTVMSLPELQQRKRELKQQLKMYDLN
FHAQHGRMPEKREKEPIRHLYESYNAYKNQISAIEKGEAEPGPGTTAFRGRSDSADAANT
ISSADSSPDRNSPTDNPSNVSPGQVNMKSSPKNASEFIDDEEDTSQNDDNVRGVSQDLSS
LKAEKATLHQMLRSYEKDFFKQHKRQVSSFSDIRPVASQYRRYKEIKKAISAMQDK
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgagaccgaacggaatgcctgcaaggaggcgacgtctcagcaaggggctcatcgcagga
gccagcagcgatacagctcgatccgaagagaagaacgccgccgccagccctggcccaatt
caaagccccaacgacaacgtccctgaaaagtcagcggcgccctcgctgcccagcgcctgc
tactctggccggctggctgctgtttgcgctcagaacgccctgcagctgggcctggtggct
aaatatgcactgtgtccgcaaggaaaggccaggaagaccctcctcgcacgggctaaaaat
aaacgacaccgatcacgcacatcggggaggacggacgcggaccccgtggcggatgctcac
gagcgggcagaggaggaatttatgaacaatccggcgggtgcagatttggcagagtacagc
tcaggggatgatgatgattttgatgcctccgtagaagacgacgagggctgggccaaggga
gtaaccgccgccaaccttgcggcagcatgcaaagagccgctcttcattccaacgggaacg
gacgcagcatcaatgggtctccaaggaggtcaggcagccggggcggggaggctcccattc
aattacagaaagctcagattctttgatgtcgtcactgcctctgatagagctgtggcgagg
gacttcttacgctcggaaattgccaatgccaagaagttacggagcacggcactctccaat
catttgaggaaggctcagctcaaagagagagagcgaatcgaaaacgaagcaaaaggggtg
gctccctctcatacactaacaacaaccaatgatagtgacatggtagatgaagttgatttg
caagcggagcagaccgctttggcaacagccttgaccagattcccgcaggaattaacgcca
accatgagtgcgtctttattgattgaaagcttggccatgaatcatcacgagagtattgag
gggatggctagatgttacgatgggatcgtctcagctggaactgcgttgctggatattgcc
aacgagacatcccgtgattcaaagtccaaattaacaacgtcggagattatggtagcctta
gcaccacttcttatcaccaccttggagcaaccatccggtgaagctattgtcgagttggcg
aagcttcgaaacttttgtggaaccaagagatatcaacgtcgtttcgttcaacgcattgct
ccatttcttgttcgtccatcagatgctgccatttggtgtttaaggcatcagactgatatt
gaacctatcatggctgcagtggaaatgattcttgataacgcagcggatgtgttctcttcc
gggtggttcgaaagaggtaggaacatgctaaaagatacacaacgtgcggagaagctccgt
ttagcggcgtcacagctccggtgtttaaactcgccatcacctgtggacggactgtttgca
agtctatcttcattgggaggatcgcatcggcgaggttctttatttgggggctcagtgtcg
aagaaggaaagtcagggtattggggatgaatcaatggcagagtgggaagtgttggcaatt
gatatgcatattcgtcagagtgttctggatgtgttttcaaaagactggagccgcatcagc
tcgttgaacctgtcgcccaaagaaagtgatacatcttcgtacgggtcgagacagaggcgt
ggtatcagtgcaacgaaatcaaaaacagcagaatggcaacacgatacaacggggccatca
atgtcagcatcatcgttgacaaagagtccacggtcaaaaataccactctctcctcgcggg
ggagtagctactcctttgtctgcatccactgctggttcgtcgcaagtgccatctgcggat
gcattggaatcaacatttggcccgtcattttcatctcaggtgattgaggacgacggtttt
gcagcactatcttccacaaatcactcaacatccgccccactgtcgcccaaacgtgctgca
tcgtcaaaactgacgactccaaaaacacccccgacaaagcacgacttccgtaacgatgag
ccttcatcaccaggagggcgtgatccatctagaataggtctcgcgccgctttcacctcag
tcgtctgttgggaacgcatctgcctcaaccatgtcacagaggagtatgtcggtggggcaa
aggggttcaaaggatcagtatcgggcgctaacatcaactgcagctgaacggaagaggact
gttgcagcttgccgggcgttgagggcacaaatcacaaagttcgaggaggcgttcattcaa
atgcatggccgtgcaccgaagggggcagcagagcgagaaccactcgccagcacgtacatg
caataccgagaatggaaacgtgccattaggactgacgcagcttgccgtattcaagcactt
tgccgtggatcaagtgtgagatcaatgatgttgagaagtcacgacgtgcgggtgtcgagg
atagtgtcgaggaggtctgtgaaaccaacgttggtggaacgcagaacgtctgatctgagt
catttgagtatcccgttagacattggaaccaatcctgttcagtcctccattttggatcat
gtcgcaaagacgagattggaggcaaggggaggactccgaggagatgatggtgtggaagtt
gtcatgagatcaggcagtgctacaacctcgagtgccattcctccgtccgttgcgccaaac
tggaagaacagacagcaagtgggtcactctggtggagattcgccaggatcctcattcaac
cagcgaccgtctccaggaaagcctcgcaacagtcaaccagatgtcactgtaatgtctctt
cctgaactgcagcaacgaaagcgagagctgaaacaacaattaaaaatgtatgacttgaac
tttcacgcacagcacggcaggatgcctgagaagagggagaaggagccaattcggcatctt
tacgagagctacaatgcatacaaaaaccaaattagtgcaatagaaaagggagaagccgag
ccggggccgggaactactgcgtttcggggcagatccgacagtgcagatgctgccaatacc
atttcaagtgccgattcatcgccggatagaaactctcccacagacaaccctagcaacgtt
tcaccaggtcaggttaatatgaagagtagtccaaagaatgcttctgaatttatagatgat
gaggaggacacttctcaaaacgacgacaatgtaaggggtgtatcgcaagatttatcgtcg
ctgaaggcagagaaggcaaccttgcatcaaatgctacgatcgtacgagaaagattttttc
aagcaacataaacgtcaggtttcaagcttcagtgacattaggcccgtggcaagtcaatat
cgcagatacaaggagattaagaaggcgatatcggcgatgcaagacaaataa
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