Turneriella parva: Turpa_2152
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Entry
Turpa_2152 CDS
T02157
Name
(GenBank) exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tpx
Turneriella parva
Pathway
tpx03410
Base excision repair
tpx03430
Mismatch repair
tpx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Turpa_2152
03430 Mismatch repair
Turpa_2152
03440 Homologous recombination
Turpa_2152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpx03400
]
Turpa_2152
DNA repair and recombination proteins [BR:
tpx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Turpa_2152
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Turpa_2152
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Turpa_2152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AFM12798
UniProt:
I4B691
LinkDB
All DBs
Position
2190638..2192689
Genome browser
AA seq
683 aa
AA seq
DB search
MLDWHALIAGRKAPYAETVYQRFLARLSEYTSDSLGDELKRQHALRYLVPTLHLLKSPFE
FPSMQTAVDLLREFMRRDTGKKLVIYGDRDADGVTSASMLTLFCREQLKLGRDEIVTLVP
REEDKYGITRDVAARIIAEKPDLLFTLDCGSSNRAEIGEIQAATGCQTIIIDHHFIPPSP
ADYPRVAAFINPKLNAEGDFTRDYCTAAITLRFIQAVLYSYSREYNETICIETDSGKMFV
RNGVPLANDHSGAVTRVYHLHQSDTSEQTRHDLWKIFEHCARENFELKRLADLAHKAPEA
VSALEIFNAVQSVSFRKSTAILQAYLPLAAIGLVADLMPVYADNRILVREGLLAMTRSAD
ALPAGLAALLKKQNLAAAVTEQDLAFSICPVINAAGRMGNAALALSALIETDPLAATKAV
FQLAQVNDARKQASQDSLDLLSAALDTRSESAPVAVAVHEKFHRGISGLIASKIAEKLMK
PALVLVPDGECYRGSVRAFRNENVHGLIDALQEHLIQFGGHRQAAGFSVAHDKIESFVTA
VFEKAAQLFQAEESADSENAAIDPFRNFNPPLEIESQHMRTPLWDELLTHAPYGVMNPHP
VVALKKPGKVEVANLGKTGAHALIKFSAPVDRNIEGVWFFHNGEAHSVATQENLEISGEP
QVGRFMGRTQYRLKITRVSATPS
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgctcgattggcatgctttgattgcgggcagaaaggccccatacgccgaaaccgtttac
cagagatttctggcgaggctaagcgagtatacgtcagattctttgggcgatgaactgaag
cgccagcatgctttgcgatatctggtgcccacactgcacctgttaaagagcccgttcgaa
tttccctcgatgcagactgcagttgacctgctgcgtgaattcatgcgacgcgatacgggt
aaaaaactggtgatctacggcgaccgcgatgccgacggagttacctcggcttcgatgttg
acgctcttctgccgcgaacagctgaagctcgggcgtgatgagattgtcacgctggtgccc
cgcgaagaagacaaatacggcatcacccgcgacgtcgctgcacgcattattgcagagaaa
cctgacctgttattcacgcttgattgtggttcgtcgaaccgcgccgaaatcggtgagata
caggcagccactggctgccagacgatcattatcgatcaccattttattccgccgagcccc
gcagactatccgcgggtcgcggcctttattaaccccaaactgaatgccgagggcgatttc
acgcgcgattattgcacggcggcaatcacgctgcggtttattcaggcagtgctctattcg
tacagccgcgaatataacgaaacaatctgcatcgagaccgattcaggcaagatgtttgtg
cgcaatggcgttccattagctaatgaccattcaggcgccgtcacgcgggtgtaccacctg
caccagtctgacacctcagaacaaacgcggcacgacctctggaaaatcttcgaacactgc
gcgcgggagaactttgaactgaagcgcctcgccgacctcgcgcacaaagcgccagaagcc
gtctcggcgcttgaaatctttaatgccgtgcaatcggtgagttttcgcaagtcgacggca
attctgcaggcttacctgccactggcggctattgggctcgttgccgacctgatgccggtt
tatgccgataaccgcattctcgtgcgcgaggggctgttggcgatgacgcgcagcgcagac
gcattgcccgcggggcttgctgcgttgctcaaaaaacagaaccttgcagcggcagtcacc
gaacaagaccttgcgttcagcatttgcccggtcatcaatgcagcaggccgcatgggcaac
gctgcacttgcgctctctgcgctcatcgagacagacccattggcggcgacaaaagctgta
tttcagctggcccaggtcaatgacgcccgcaagcaggcatcacaagattcgctcgatctt
ctttcggcagcgctcgatacgcgctcagagtcagcgccggtcgcggtcgctgtgcacgag
aaatttcaccgaggtatttcaggccttatcgcgtcaaaaatcgccgaaaagctcatgaag
ccggcgctcgtgcttgtgcccgatggcgaatgctaccgcggttcggtgcgtgcatttcgc
aatgaaaatgtgcacggcctcatcgatgcgctgcaagaacatctgatacagttcggcggc
catcgccaggctgcgggtttttctgtagcgcatgataaaatcgaaagctttgtcacggcg
gtgttcgagaaagccgcacagctatttcaggcagaagaaagcgcagattctgaaaatgct
gcgatagacccgtttagaaattttaatccccctctcgaaattgaaagccagcacatgcgc
accccattgtgggacgagcttctcacccacgcgccttacggcgtcatgaacccgcacccg
gtggtcgcactcaaaaaaccaggcaaagttgaagtcgcgaacctcggtaaaaccggcgcg
catgcgctcattaagttcagtgcgcccgttgaccgcaatatcgaaggcgtttggttcttt
cacaacggcgaagcgcacagcgttgccacgcaagagaatcttgaaatcagcggcgagccg
caggtcgggcgattcatggggcgcacgcaatatcgcctgaagatcacgcgcgtcagcgcg
accccgtcttaa
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