Talaromyces rugulosus: TRUGW13939_06370
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Entry
TRUGW13939_06370 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K14962
COMPASS component SWD2
Organism
trg
Talaromyces rugulosus
Pathway
trg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
TRUGW13939_06370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trg03019
]
TRUGW13939_06370
03036 Chromosome and associated proteins [BR:
trg03036
]
TRUGW13939_06370
Messenger RNA biogenesis [BR:
trg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
TRUGW13939_06370
Chromosome and associated proteins [BR:
trg03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
TRUGW13939_06370
COMPASS/SET1 complex (yeast)
TRUGW13939_06370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
WDCP
Nucleoporin_N
TrpBP
Motif
Other DBs
NCBI-GeneID:
55993865
NCBI-ProteinID:
XP_035345416
LinkDB
All DBs
Position
III:join(4629028..4629201,4629261..4629483,4629540..4630318)
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AA seq
391 aa
AA seq
DB search
MADVAPPPEQQDQKVSGAASSDTPQVGTPLGPPPVPRSATPQPSQKVSDVIPIYRASKRF
RLSKHDSSHITSLDFDDKGEYIVAACEDETIQVFDVIEGKNTKVVPSKKYGVHLARFTHH
SRQILHASTKVDDSLRLLDLHQESYLRYFSGHTDKVTSLALSPGTDAFVSCSKDNSISLW
DLRSRNVQGKLQLATPYLVAFDPTASVIAIASQSTSSVLLYDFRNYDRAPFATFDLVPHE
ERYTPATRGRLWSRLEFSNDGKNLLVGTDYHGHFVLDAFEGTLNAFLGGRKGSSGRAAPI
SSSGKPLGQGDACFTQDGRYIVGGAGEQTEVHVWDTHQISDTGAYLQPTIILPSRARTAV
IEMNPRYNMLATADKDIQFWLPDEGVKSSDK
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgtcgcaccgccgccagaacagcaggaccaaaaggtttctggcgctgcctct
tccgacacaccacaggtcggcactcctcttggtccgcctcctgtgcctcgctctgctact
ccccagccgtctcagaaggtgtcggatgtcataccaatttaccgcgcatcgaaacgcttc
agactttcgaagcacgacagctcccacattacttctctcgatttcgacgacaaaggagaa
tatatagtagctgcctgcgaggacgagaccattcaagtttttgacgttatcgaaggcaag
aatacgaaagtggtccccagcaagaaatatggagtgcacctcgcccgctttacccaccat
tcacgccagatactccacgccagtactaaagtggacgactctcttcgtcttctagacttg
catcaagaaagttaccttcgatatttcagcggacacacggacaaggtgacatcgctggcg
ctgtcacccggtactgacgccttcgtatcatgctcaaaagacaactcgatttctctttgg
gatttgaggtcccgaaatgtgcagggaaagctccagctagcgactccgtatttggttgct
tttgaccccacggcttccgtgatcgccattgcctcccagtcgacctcttcggtcttgctc
tacgatttccgtaactacgacagagccccctttgccacctttgacctggttcctcatgag
gaacgatatacaccagcgactcggggaagattgtggtcgcgtttagagttttccaacgat
ggcaaaaaccttctcgtcggcaccgactaccacggccattttgttctagacgcattcgag
ggcacattgaatgctttcttgggtggcagaaaaggatctagtggaagggcggcccccata
tcgagctctggaaagcccttgggtcaaggtgatgcttgtttcacccaagatggccgatat
atcgtaggaggggctggtgaacagaccgaagtccacgtatgggacactcaccagatttca
gacacgggtgcgtatttacagcccacgattattttgccgtccagagcccgcacagccgtg
atcgaaatgaatcccagatacaacatgcttgcaaccgccgacaaagatattcaattctgg
ctacctgacgagggggttaaatcttccgacaaataa
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