KEGG   Talaromyces rugulosus: TRUGW13939_06370
Entry
TRUGW13939_06370  CDS       T06879                                 
Name
(RefSeq) uncharacterized protein
  KO
K14962  COMPASS component SWD2
Organism
trg  Talaromyces rugulosus
Pathway
trg03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:trg00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    TRUGW13939_06370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:trg03019]
    TRUGW13939_06370
   03036 Chromosome and associated proteins [BR:trg03036]
    TRUGW13939_06370
Messenger RNA biogenesis [BR:trg03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     TRUGW13939_06370
Chromosome and associated proteins [BR:trg03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     TRUGW13939_06370
    COMPASS/SET1 complex (yeast)
     TRUGW13939_06370
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 WDCP Nucleoporin_N TrpBP
Other DBs
NCBI-GeneID: 55993865
NCBI-ProteinID: XP_035345416
LinkDB
Position
III:join(4629028..4629201,4629261..4629483,4629540..4630318)
AA seq 391 aa
MADVAPPPEQQDQKVSGAASSDTPQVGTPLGPPPVPRSATPQPSQKVSDVIPIYRASKRF
RLSKHDSSHITSLDFDDKGEYIVAACEDETIQVFDVIEGKNTKVVPSKKYGVHLARFTHH
SRQILHASTKVDDSLRLLDLHQESYLRYFSGHTDKVTSLALSPGTDAFVSCSKDNSISLW
DLRSRNVQGKLQLATPYLVAFDPTASVIAIASQSTSSVLLYDFRNYDRAPFATFDLVPHE
ERYTPATRGRLWSRLEFSNDGKNLLVGTDYHGHFVLDAFEGTLNAFLGGRKGSSGRAAPI
SSSGKPLGQGDACFTQDGRYIVGGAGEQTEVHVWDTHQISDTGAYLQPTIILPSRARTAV
IEMNPRYNMLATADKDIQFWLPDEGVKSSDK
NT seq 1176 nt   +upstreamnt  +downstreamnt
atggcagacgtcgcaccgccgccagaacagcaggaccaaaaggtttctggcgctgcctct
tccgacacaccacaggtcggcactcctcttggtccgcctcctgtgcctcgctctgctact
ccccagccgtctcagaaggtgtcggatgtcataccaatttaccgcgcatcgaaacgcttc
agactttcgaagcacgacagctcccacattacttctctcgatttcgacgacaaaggagaa
tatatagtagctgcctgcgaggacgagaccattcaagtttttgacgttatcgaaggcaag
aatacgaaagtggtccccagcaagaaatatggagtgcacctcgcccgctttacccaccat
tcacgccagatactccacgccagtactaaagtggacgactctcttcgtcttctagacttg
catcaagaaagttaccttcgatatttcagcggacacacggacaaggtgacatcgctggcg
ctgtcacccggtactgacgccttcgtatcatgctcaaaagacaactcgatttctctttgg
gatttgaggtcccgaaatgtgcagggaaagctccagctagcgactccgtatttggttgct
tttgaccccacggcttccgtgatcgccattgcctcccagtcgacctcttcggtcttgctc
tacgatttccgtaactacgacagagccccctttgccacctttgacctggttcctcatgag
gaacgatatacaccagcgactcggggaagattgtggtcgcgtttagagttttccaacgat
ggcaaaaaccttctcgtcggcaccgactaccacggccattttgttctagacgcattcgag
ggcacattgaatgctttcttgggtggcagaaaaggatctagtggaagggcggcccccata
tcgagctctggaaagcccttgggtcaaggtgatgcttgtttcacccaagatggccgatat
atcgtaggaggggctggtgaacagaccgaagtccacgtatgggacactcaccagatttca
gacacgggtgcgtatttacagcccacgattattttgccgtccagagcccgcacagccgtg
atcgaaatgaatcccagatacaacatgcttgcaaccgccgacaaagatattcaattctgg
ctacctgacgagggggttaaatcttccgacaaataa

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