KEGG   Takifugu rubripes (torafugu): 101061484
Entry
101061484         CDS       T02386                                 
Symbol
ythdc2
Name
(RefSeq) 3'-5' RNA helicase YTHDC2
  KO
K20099  ATP-dependent RNA helicase YTHDC2 [EC:3.6.4.13]
Organism
tru  Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:tru00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tru03041]
    101061484 (ythdc2)
Enzymes [BR:tru01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     101061484 (ythdc2)
Spliceosome [BR:tru03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    101061484 (ythdc2)
SSDB
Motif
Pfam: YTH OB_NTP_bind HA2_C Helicase_C R3H DEAD HA2_N AAA_19 nSTAND3 Ank_2 ATPase AAA_22 AAA_7 ResIII T2SSE TrwB_AAD_bind SRP54 Ank FtsK_SpoIIIE UvrD-helicase PhoH
Other DBs
NCBI-GeneID: 101061484
NCBI-ProteinID: XP_029693449
Ensembl: ENSTRUG00000006717
LinkDB
Position
6:complement(1693866..1709319)
AA seq 1374 aa
MLRAVASAKKPGKSQKARLRSIPNALRKIHIDEEVKIALNLSLERFYYSDQKVMEFPSSL
SSNERAFLHRAAQSLGYSSKSKGKGPNRFLTVTKKDGPDKPQHSMLLNPSHNTLFVIHNL
LERFPISNKERVDMQLSTRSAASLVSEAENALDKNKASGRLNKGIPVVPPQRGSSEHDAF
RCSLPVQEHKQEIIKLIRENRVVLVVGATGSGKTTQIPQFLLDECHKNHEPCRIFCTQPR
RLATITVADRVAAERGENVGKTVGYHIRLESRVSPKTVLTFCTSGVFLRTLMAGDASLTT
VTHVIVDEVHERDGLTDFLLTKLRDVLPKFPSLKLILCSAALDTELFRQYFGSCPVINLK
GRLFDVKEFFLEDILKLTGFKKKEIMNHNAEAHETKNKQKSLTEWCETLKNTSVEEEEGT
SVLSRVPEDSSVLDGEDGALNSLPENNPEQLEPWLVREMDSCISNIFLNEDQDAFIQLFN
LILYENMNVNYRHSETGTTALMVTAGQGFLTQMEQLLHMGADVNIKASNGWTAADFAKHF
HQSESLELLKSFLEVCSPDGSTVEQQVTVESSNKEEELLKLYHQSFDDELVDLDLIMDLL
HYICSTSSDGAILIFLPGYDEIVAMRDRILYNDSRFSVQAERYQLFILHSEMQTLDQKKA
LKTPPSGVRKIILSTNIAETSITISDVVFVIDSGKVKEKSYDTLSRVSMLKTIWISKASV
LQRKGRAGRCKPGYCFHLFSRLRFDNMLEFQVPQLLRMPLQELCLQTKLLAPASCQVAEF
LAKAPQPPPAHAIKNALQILKSIDAMEQHEDLTDLGFHLADLPVEPHLGKMVLCAVVLKC
LDPILTIACTLAYRDPFILPAEGSKKKAALHCRKHFASSSFSDHMALLRAFQAWQKARSD
GWERAFCEKYFLSQATMNMILGMRTQLLGQLRAIGFVRAHGGSDIRDVNQNSENWAVVKA
ALVAGMYPNLAHVDQETALLSSSRKKKLHFHPTSVLNQSQLKEGNPAKTPQKYPTEWLVY
DEMSRGHRMVIIRCCSMVTPITAAIFAGCAKLPFPALQEAAEPRSAGTQLDGTSDSDSDT
EDQIDFKINDWLIFQMDRNAARLVYEMRHKWQNLFIKKMRFPSKPWSQQDEAIIHAVVSV
LAAEEHAAGLQQPTGIGQRPRPMAMEEDHSSAKSSKSTPHLPAAAPSYSPLRDSSGKMPA
ASGQVQWKPGNREETPQPLDQFVPKPVCPPSFSSAHYFIMKSSNIGSIKISQQRGIWSTT
PSNETKLSKAFTDDHLIILIFSVQGSGHFQGYARMTSVISQESCQDWDFLGLGGVFSVEW
IQKESLPFHCTQHILNPWNDNKKVQISRDGQELEPQAAAQLLSLWDRNSVKQVE
NT seq 4125 nt   +upstreamnt  +downstreamnt
atgctgcgtgctgttgcatctgcaaaaaagccaggcaagagccagaaggcacggctccgt
tccatcccaaatgccctcaggaaaattcacatcgatgaagaggtcaagatagcactgaac
ctctctttagaaaggttttattacagtgaccagaaagtgatggaatttccctcctcgttg
tccagtaatgagagggctttccttcatcgagcggcacagtctctgggttacagttctaag
agcaaagggaagggaccaaatcgcttcctcactgtcacaaagaaggatggtccagacaaa
cctcagcacagcatgctcctcaatccatcccataatacattatttgtcatccacaacctg
ctggaacggtttcccatcagtaataaggaacgtgtggacatgcagcttagcaccagaagt
gcggcttctttggtgtcagaggctgaaaatgccttggacaaaaacaaggccagcgggcgg
ctaaacaaaggcatacctgtggtgcctccacagaggggttcctccgaacatgacgctttt
cgatgctccctgcctgtacaggaacacaagcaggaaatcatcaaactcatcagagaaaac
agggtggtgctggtggttggagcaactggctctgggaagactacccagatcccacagttc
ctgctggatgaatgtcacaagaaccatgagccctgtaggattttctgcactcagcccagg
cgcctggctaccatcacagttgctgacagggtagcagcagaaagaggagagaatgttggc
aaaactgtaggttatcacatcagacttgagagcagggtctctcccaagacggtgctgacc
ttctgcaccagcggagtgttcctcagaacgctgatggctggagatgctagcctgacaact
gtcacacatgtgattgtggatgaggtgcatgaacgtgatggcttgactgacttcttgctc
acaaaactgcgagatgtgcttccgaagtttccctcactgaaactgatcctctgcagtgca
gctctggacacagaacttttccgtcagtactttggctcctgtcctgtcatcaatctcaaa
ggaagactgtttgacgtgaaggaattctttttggaggacattctgaagctgactggcttt
aaaaagaaggagataatgaatcacaatgccgaggcacatgaaaccaagaataagcagaaa
agtttgacagagtggtgtgagacactgaagaacacttctgttgaagaggaagaagggaca
tcggtgctgagtcgtgtccctgaggacagcagtgtcttggatggagaggacggggccctc
aacagtctgcctgagaacaacccggaacagttggaaccatggctggtgagagaaatggac
tcctgcatttccaacatcttcctgaatgaagaccaggatgcttttattcagcttttcaac
ctcatcctctatgaaaacatgaatgtgaactacaggcacagtgaaacagggaccacagct
ctgatggtgacagcaggtcaaggctttctcacccagatggagcagctgcttcacatgggt
gctgatgtcaacataaaggcttctaatggatggacggctgcagactttgctaaacacttc
catcagagtgaatccctggagctgctcaaatcttttctagaggtatgcagtcctgatggg
tccacagtggagcagcaggtcactgtagagagcagcaataaagaggaggaactgctgaaa
ctctaccaccagagctttgatgatgaactggttgacctggaccttatcatggaccttctc
cattacatctgctccaccagcagtgatggtgccatcttaatttttcttcctggatatgat
gaaatagtggcgatgagggatcgaatcctttataatgacagcagattctctgttcaggct
gagaggtaccagctgttcatcctgcattctgaaatgcagactctggaccagaagaaggcc
ttgaagacccccccaagtggtgttagaaaaataattctttctaccaacatcgctgagacc
agtatcacaatcagtgatgtggtctttgtcattgattcagggaaggtcaaagagaaatcc
tacgacactctcagtcgtgtttccatgttaaagacaatttggatttctaaagctagcgtc
ctgcagaggaagggaagggctgggcgttgtaaaccagggtactgcttccacctcttcagt
cgcctcaggtttgacaacatgctggaattccaggttccacagcttctgcgtatgcctctg
caggaactgtgtctgcagaccaaactactggccccagcttcctgtcaggtagctgagttc
ttggctaaagctcctcagcctcctccagcacacgcaatcaagaacgctctacagatactg
aagtcaatagatgctatggagcaacatgaagacctgactgatcttggcttccacctggct
gaccttcctgtggagccccacctgggcaagatggtgttgtgtgctgtggttcttaagtgt
ctggacccaattctaaccattgcctgcaccctggcctatcgtgaccccttcatccttcct
gctgagggctctaaaaaaaaggcagctctgcactgtcgcaaacattttgcgtctagtagt
tttagtgaccacatggctctgctgagagcgtttcaggcatggcagaaagctcgcagcgat
ggctgggaaagagcattttgtgagaaatacttcctgtcccaggccaccatgaatatgatc
cttggcatgaggactcagctgttgggccagctccgggcgattggtttcgtgcgggctcac
gggggcagtgatatccgtgacgtcaatcagaattccgagaactgggctgtagtgaaagca
gcactggtggctgggatgtatcccaacttggcccacgtggatcaagaaactgccctgctt
tccagcagcaggaagaagaagttgcattttcaccccacatctgttctgaaccagtcccag
ctcaaagagggcaaccctgccaagacaccccagaagtatcccacagagtggctggtgtac
gatgagatgagcagaggccacagaatggtcatcatccgctgttgctcgatggtcactccc
atcactgccgccatatttgccggttgtgcaaaactgccctttcctgccctccaagaagca
gctgagccaagatctgctgggacgcagctggacggcaccagtgacagtgacagtgacaca
gaggaccagattgattttaagatcaacgattggctcattttccagatggacagaaatgct
gctcggctggtctatgaaatgagacataagtggcaaaacctgttcatcaagaagatgcgt
tttccatccaagccatggtcccaacaagatgaggccatcatccacgctgtggtttctgtc
ctcgcagcagaagagcatgctgcaggtctgcagcaacctacaggcattggccagagaccc
cggcccatggcaatggaagaagaccactcgtctgcaaagagctcaaagagcaccccccac
ctaccggctgctgctccgagctactcaccactacgggacagttctgggaagatgccagca
gcttcaggccaggttcagtggaagcctgggaacagagaagagactccccagcccttagac
cagtttgtcccaaagccagtttgtccaccaagcttttcatcagcgcactacttcatcatg
aaaagtagcaacattgggagtataaaaatatcccagcagaggggcatctggtccacaaca
ccaagtaatgagaccaagctctccaaggccttcacggatgaccacctcatcatccttatc
ttctccgtccagggttcaggtcacttccagggttacgctcgcatgacgtctgtcatcagc
caggagagctgccaggactgggatttcctgggattaggaggagtcttcagcgttgagtgg
atccagaaggagagtcttccttttcactgcacccagcatatcctgaacccgtggaatgac
aacaagaaggtccagatcagcagggacggacaggaattggagcctcaggcagctgctcag
ctcttgtctctgtgggacagaaactctgtgaagcaggtggaataa

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