Takifugu rubripes (torafugu): 101061484
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Entry
101061484 CDS
T02386
Symbol
ythdc2
Name
(RefSeq) 3'-5' RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
3.6.4.13
]
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tru03041
]
101061484 (ythdc2)
Enzymes [BR:
tru01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.13 RNA helicase
101061484 (ythdc2)
Spliceosome [BR:
tru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101061484 (ythdc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
OB_NTP_bind
HA2_C
Helicase_C
R3H
DEAD
HA2_N
AAA_19
nSTAND3
Ank_2
ATPase
AAA_22
AAA_7
ResIII
T2SSE
TrwB_AAD_bind
SRP54
Ank
FtsK_SpoIIIE
UvrD-helicase
PhoH
Motif
Other DBs
NCBI-GeneID:
101061484
NCBI-ProteinID:
XP_029693449
Ensembl:
ENSTRUG00000006717
LinkDB
All DBs
Position
6:complement(1693866..1709319)
Genome browser
AA seq
1374 aa
AA seq
DB search
MLRAVASAKKPGKSQKARLRSIPNALRKIHIDEEVKIALNLSLERFYYSDQKVMEFPSSL
SSNERAFLHRAAQSLGYSSKSKGKGPNRFLTVTKKDGPDKPQHSMLLNPSHNTLFVIHNL
LERFPISNKERVDMQLSTRSAASLVSEAENALDKNKASGRLNKGIPVVPPQRGSSEHDAF
RCSLPVQEHKQEIIKLIRENRVVLVVGATGSGKTTQIPQFLLDECHKNHEPCRIFCTQPR
RLATITVADRVAAERGENVGKTVGYHIRLESRVSPKTVLTFCTSGVFLRTLMAGDASLTT
VTHVIVDEVHERDGLTDFLLTKLRDVLPKFPSLKLILCSAALDTELFRQYFGSCPVINLK
GRLFDVKEFFLEDILKLTGFKKKEIMNHNAEAHETKNKQKSLTEWCETLKNTSVEEEEGT
SVLSRVPEDSSVLDGEDGALNSLPENNPEQLEPWLVREMDSCISNIFLNEDQDAFIQLFN
LILYENMNVNYRHSETGTTALMVTAGQGFLTQMEQLLHMGADVNIKASNGWTAADFAKHF
HQSESLELLKSFLEVCSPDGSTVEQQVTVESSNKEEELLKLYHQSFDDELVDLDLIMDLL
HYICSTSSDGAILIFLPGYDEIVAMRDRILYNDSRFSVQAERYQLFILHSEMQTLDQKKA
LKTPPSGVRKIILSTNIAETSITISDVVFVIDSGKVKEKSYDTLSRVSMLKTIWISKASV
LQRKGRAGRCKPGYCFHLFSRLRFDNMLEFQVPQLLRMPLQELCLQTKLLAPASCQVAEF
LAKAPQPPPAHAIKNALQILKSIDAMEQHEDLTDLGFHLADLPVEPHLGKMVLCAVVLKC
LDPILTIACTLAYRDPFILPAEGSKKKAALHCRKHFASSSFSDHMALLRAFQAWQKARSD
GWERAFCEKYFLSQATMNMILGMRTQLLGQLRAIGFVRAHGGSDIRDVNQNSENWAVVKA
ALVAGMYPNLAHVDQETALLSSSRKKKLHFHPTSVLNQSQLKEGNPAKTPQKYPTEWLVY
DEMSRGHRMVIIRCCSMVTPITAAIFAGCAKLPFPALQEAAEPRSAGTQLDGTSDSDSDT
EDQIDFKINDWLIFQMDRNAARLVYEMRHKWQNLFIKKMRFPSKPWSQQDEAIIHAVVSV
LAAEEHAAGLQQPTGIGQRPRPMAMEEDHSSAKSSKSTPHLPAAAPSYSPLRDSSGKMPA
ASGQVQWKPGNREETPQPLDQFVPKPVCPPSFSSAHYFIMKSSNIGSIKISQQRGIWSTT
PSNETKLSKAFTDDHLIILIFSVQGSGHFQGYARMTSVISQESCQDWDFLGLGGVFSVEW
IQKESLPFHCTQHILNPWNDNKKVQISRDGQELEPQAAAQLLSLWDRNSVKQVE
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtgctgttgcatctgcaaaaaagccaggcaagagccagaaggcacggctccgt
tccatcccaaatgccctcaggaaaattcacatcgatgaagaggtcaagatagcactgaac
ctctctttagaaaggttttattacagtgaccagaaagtgatggaatttccctcctcgttg
tccagtaatgagagggctttccttcatcgagcggcacagtctctgggttacagttctaag
agcaaagggaagggaccaaatcgcttcctcactgtcacaaagaaggatggtccagacaaa
cctcagcacagcatgctcctcaatccatcccataatacattatttgtcatccacaacctg
ctggaacggtttcccatcagtaataaggaacgtgtggacatgcagcttagcaccagaagt
gcggcttctttggtgtcagaggctgaaaatgccttggacaaaaacaaggccagcgggcgg
ctaaacaaaggcatacctgtggtgcctccacagaggggttcctccgaacatgacgctttt
cgatgctccctgcctgtacaggaacacaagcaggaaatcatcaaactcatcagagaaaac
agggtggtgctggtggttggagcaactggctctgggaagactacccagatcccacagttc
ctgctggatgaatgtcacaagaaccatgagccctgtaggattttctgcactcagcccagg
cgcctggctaccatcacagttgctgacagggtagcagcagaaagaggagagaatgttggc
aaaactgtaggttatcacatcagacttgagagcagggtctctcccaagacggtgctgacc
ttctgcaccagcggagtgttcctcagaacgctgatggctggagatgctagcctgacaact
gtcacacatgtgattgtggatgaggtgcatgaacgtgatggcttgactgacttcttgctc
acaaaactgcgagatgtgcttccgaagtttccctcactgaaactgatcctctgcagtgca
gctctggacacagaacttttccgtcagtactttggctcctgtcctgtcatcaatctcaaa
ggaagactgtttgacgtgaaggaattctttttggaggacattctgaagctgactggcttt
aaaaagaaggagataatgaatcacaatgccgaggcacatgaaaccaagaataagcagaaa
agtttgacagagtggtgtgagacactgaagaacacttctgttgaagaggaagaagggaca
tcggtgctgagtcgtgtccctgaggacagcagtgtcttggatggagaggacggggccctc
aacagtctgcctgagaacaacccggaacagttggaaccatggctggtgagagaaatggac
tcctgcatttccaacatcttcctgaatgaagaccaggatgcttttattcagcttttcaac
ctcatcctctatgaaaacatgaatgtgaactacaggcacagtgaaacagggaccacagct
ctgatggtgacagcaggtcaaggctttctcacccagatggagcagctgcttcacatgggt
gctgatgtcaacataaaggcttctaatggatggacggctgcagactttgctaaacacttc
catcagagtgaatccctggagctgctcaaatcttttctagaggtatgcagtcctgatggg
tccacagtggagcagcaggtcactgtagagagcagcaataaagaggaggaactgctgaaa
ctctaccaccagagctttgatgatgaactggttgacctggaccttatcatggaccttctc
cattacatctgctccaccagcagtgatggtgccatcttaatttttcttcctggatatgat
gaaatagtggcgatgagggatcgaatcctttataatgacagcagattctctgttcaggct
gagaggtaccagctgttcatcctgcattctgaaatgcagactctggaccagaagaaggcc
ttgaagacccccccaagtggtgttagaaaaataattctttctaccaacatcgctgagacc
agtatcacaatcagtgatgtggtctttgtcattgattcagggaaggtcaaagagaaatcc
tacgacactctcagtcgtgtttccatgttaaagacaatttggatttctaaagctagcgtc
ctgcagaggaagggaagggctgggcgttgtaaaccagggtactgcttccacctcttcagt
cgcctcaggtttgacaacatgctggaattccaggttccacagcttctgcgtatgcctctg
caggaactgtgtctgcagaccaaactactggccccagcttcctgtcaggtagctgagttc
ttggctaaagctcctcagcctcctccagcacacgcaatcaagaacgctctacagatactg
aagtcaatagatgctatggagcaacatgaagacctgactgatcttggcttccacctggct
gaccttcctgtggagccccacctgggcaagatggtgttgtgtgctgtggttcttaagtgt
ctggacccaattctaaccattgcctgcaccctggcctatcgtgaccccttcatccttcct
gctgagggctctaaaaaaaaggcagctctgcactgtcgcaaacattttgcgtctagtagt
tttagtgaccacatggctctgctgagagcgtttcaggcatggcagaaagctcgcagcgat
ggctgggaaagagcattttgtgagaaatacttcctgtcccaggccaccatgaatatgatc
cttggcatgaggactcagctgttgggccagctccgggcgattggtttcgtgcgggctcac
gggggcagtgatatccgtgacgtcaatcagaattccgagaactgggctgtagtgaaagca
gcactggtggctgggatgtatcccaacttggcccacgtggatcaagaaactgccctgctt
tccagcagcaggaagaagaagttgcattttcaccccacatctgttctgaaccagtcccag
ctcaaagagggcaaccctgccaagacaccccagaagtatcccacagagtggctggtgtac
gatgagatgagcagaggccacagaatggtcatcatccgctgttgctcgatggtcactccc
atcactgccgccatatttgccggttgtgcaaaactgccctttcctgccctccaagaagca
gctgagccaagatctgctgggacgcagctggacggcaccagtgacagtgacagtgacaca
gaggaccagattgattttaagatcaacgattggctcattttccagatggacagaaatgct
gctcggctggtctatgaaatgagacataagtggcaaaacctgttcatcaagaagatgcgt
tttccatccaagccatggtcccaacaagatgaggccatcatccacgctgtggtttctgtc
ctcgcagcagaagagcatgctgcaggtctgcagcaacctacaggcattggccagagaccc
cggcccatggcaatggaagaagaccactcgtctgcaaagagctcaaagagcaccccccac
ctaccggctgctgctccgagctactcaccactacgggacagttctgggaagatgccagca
gcttcaggccaggttcagtggaagcctgggaacagagaagagactccccagcccttagac
cagtttgtcccaaagccagtttgtccaccaagcttttcatcagcgcactacttcatcatg
aaaagtagcaacattgggagtataaaaatatcccagcagaggggcatctggtccacaaca
ccaagtaatgagaccaagctctccaaggccttcacggatgaccacctcatcatccttatc
ttctccgtccagggttcaggtcacttccagggttacgctcgcatgacgtctgtcatcagc
caggagagctgccaggactgggatttcctgggattaggaggagtcttcagcgttgagtgg
atccagaaggagagtcttccttttcactgcacccagcatatcctgaacccgtggaatgac
aacaagaaggtccagatcagcagggacggacaggaattggagcctcaggcagctgctcag
ctcttgtctctgtgggacagaaactctgtgaagcaggtggaataa
DBGET
integrated database retrieval system