Takifugu rubripes (torafugu): 101061888
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Entry
101061888 CDS
T02386
Name
(RefSeq) slit homolog 1 protein-like isoform X2
KO
K06838
slit 1
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tru00536
]
101061888
Glycosaminoglycan binding proteins [BR:
tru00536
]
Heparan sulfate / Heparin
Axon guidance molecules
101061888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
Laminin_G_1
LRRNT
LRRCT
LRR_9
hEGF
DL-JAG_EGF-like
EGF_3
Motif
Other DBs
NCBI-GeneID:
101061888
NCBI-ProteinID:
XP_003972277
Ensembl:
ENSTRUG00000006451
LinkDB
All DBs
Position
17:8881738..8910083
Genome browser
AA seq
1558 aa
AA seq
DB search
MLAAGLDRSLGWAPWLMLVWAMVLLLMPWGGGVDACPSPCSCLGNTVDCHGRGIYVVPKN
IPRGAERLDLNGNNLTVISKMDFSGLKRLRVLHLMENQISTVERGAFDELKELERLRLNK
NRLRQIPELLFQKNEALTRLDLSENVIQAIPRRTFRGATELKNLQLDKNHISCIEEGAFR
ALRMLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNSLRCDCHLAWLSPWLRQRSSLGL
YAQCSFPPSLRGLNLAELRKSDLACSGHGGSAFVQPCSLASGSCPPMCSCSNNIVDCRGR
GLTAIPAHLPEAMTEIRLEQNGIKSVPPGAFSSYKKLRRIDLSNNQISEIALDAFLGLRA
LNSLVLYGNKITELPASVFDGLTSLELLLLNANKIHCIRASLFKDLENLVLLSLYDNKIQ
SLAKGTFSSLHSIQTLHLAQNPFICDCHVKWLADFLRANPIETSGARCTSPRRLANKRIA
QIKSNKFRCSAKEQYLIPGAEDRHLSYECNSKPVCPAKCRCEANVVDCSNLRLTKFPEHL
PSFTEELRLNNNDLSVLEATGAFKGLLQLKKINLSNNKISEIEDGAFDGATSVVEIHLTA
NHLESVRGSMFKGMEGLRMLMLRNNKISCLHNGSFTGLNNVRLLSLYDNQLNTILPGSFD
ALPNLSTLNLLANPFNCDCRLSWFGVWLRSRHIVTGNPRCQSPAFLREIPLQDVAVPDFR
CEDDATQDDGSCGLGPQCPSQCTCMDSVVRCSNKHLQALPRGLPRNVTELYLDGNQFTSV
PKELATFRFLQLVDLSNNKISFLSDDSFSNMSQLTTLILSYNALRCIPPRALSGLRSLRL
LSLHGNDISELQQGIFNDVASLSHLAIGANPLYCDCRLLWLSDWVKSGYKEPGIARCAGP
SGTEGKLLLTTPTDSFQCNGPVEPSVRAKCSPCVSSPCQNQGVCRDDHTQLFTCTCKPGF
TGKHCETPVDACVSNPCTNGGVCLSDEQTRGFSCACAFGFHGTFCEVNVDDCQDHGCENG
ATCVDGVGNYTCLCSPNYKGRFCEEVDSVCSPGRNPCHHQSTCISTPVGPRCVCIPGWVG
PECSIDYNECVDHHCQNGAQCVDHLDGYSCACPQGFSGEFCEVATPPAASPCQLAQCQNG
ALCEDKTGMAACQCQPGFEGQRCEKLVSVNFIYRDSYVQLQDVKNWPHANITLQVSTAED
NGVLLYNGDNEPIAVELHQGHVRVTYDPGNQPATTIYSMETVNDGQFHTVELLTFNQKLN
LSVDGGEPMTLDSQGRSQAATGEVPLYVGGMPEEVLPASLGLSVQILNTSSFHGCIRNLY
INHELQDFTRGHMKPGVVPGCQACHKLYCVHGVCRPDGTQGPQCHCHPGWAGLHCDQPAT
AALSGAEGVTMATGVSPCAGSKCVKGACMTVDANQYRCDCEEGYEGVLCHLRGRSASWCG
GLHCVRGQCEQLAGVERCVCEEGYSGQNCDIELPCGGEPVRDYHRIRRGTALCQTAKPFS
WFECRGRCAVGGDSAAATTSCCAPLRVRRRRLSFECDDGTTFTQDVEKPVECGCKECV
NT seq
4677 nt
NT seq
+upstream
nt +downstream
nt
atgcttgctgcaggtttagacagaagcctgggctgggctccatggctgatgttggtgtgg
gctatggtactattgttgatgccatggggcggcggcgtggacgcatgcccctctccctgc
agctgtctgggaaacacggtggactgccatggccgcgggatctacgttgtacccaaaaac
atccccagaggggccgagaggcttgatctgaatggaaacaacctgacagtcatcagcaag
atggacttcagtggtctcaaacgcctcagagtccttcacttgatggagaaccaaatcagc
accgtggagagaggagcattcgatgagctgaaggagctggagagactgcgtctcaacaag
aaccgcctcagacagattccagagctgctgttccagaagaacgaagccttgacgcgactg
gatctgagtgaaaatgtaatccaggcaattccacgacggaccttcagaggtgccactgag
ctgaaaaatcttcagctggataaaaaccacatcagctgcatcgaggaaggagcattcaga
gctttgcggatgctggaggttctcacgctgaacaacaacaacatcagcagcattcccgtc
tccagtttcaaccacatgcccaaactccgaaccttccgtctccattcaaactctttgcgc
tgcgactgccacttggcctggttgtcaccgtggttacggcagaggtcgtctttaggcctg
tacgctcagtgtagcttccctccgtcattgagaggcctcaacctcgctgagctgcgtaag
agcgacttggcttgctcaggtcatggcggcagcgccttcgtccagccgtgcagcctggca
tctggctcctgtcctcctatgtgttcctgcagcaacaacattgtggactgtcgtgggcgg
ggcttaactgcaatccctgcccacctgcccgaggccatgactgagattcgcttagagcag
aatggtatcaagtcagttcctcctggtgccttctcctcctacaagaagctgcggcgcata
gatctgagtaacaaccagatatctgagattgctctggatgccttccttggcctgagagct
ctcaactcactggttctgtatggtaataagatcacggagctgcctgccagcgtgtttgat
ggcctgacctctctggagcttctgttgctgaatgccaataagatccactgcatcagagca
tcactcttcaaagacctggagaacctggtgctgctgtcgctgtatgacaacaagatccag
agtctggccaaaggcaccttcagctcgctgcacagcatccaaacgttgcatctggcacag
aaccccttcatctgtgactgtcatgtcaagtggctggcggacttcctgcgtgctaaccca
atagagaccagtggcgcccgctgcaccagcccccgccgcctcgccaacaaacgcatcgca
cagattaaaagcaacaagttccgctgttctgccaaggagcagtacctgattccaggtgct
gaagacaggcatctgagctacgagtgtaacagcaaacctgtttgtccagccaaatgtcgc
tgtgaagcaaatgtggttgactgttctaatctccgcctgaccaagttccctgaacacctg
ccgtccttcaccgaagagctgcgcctcaacaacaatgacctctcggtgctggaggccacc
ggtgcgttcaaaggcctgttgcagctcaagaaaattaacttgagcaacaacaaaatctcg
gagattgaggatggcgcatttgatggggctacctcggtagtggagattcacctgacagcc
aatcacctggagtctgtaagagggagcatgttcaaaggcatggagggactccgcatgctg
atgctgaggaacaacaagatcagttgtctccacaatggaagcttcacaggtttgaacaac
gttcggctgctgtcactgtatgacaaccagctcaacaccatcctgcctggatcctttgac
gcgctgcccaacctgtccaccctgaatcttctggccaatcccttcaactgtgactgccgt
ctttcttggtttggggtgtggcttaggagccgtcatattgtcacaggaaatccacgttgc
cagagtcccgcatttttacgggagatccccctgcaggatgtggcagtgcctgactttcgc
tgcgaggacgatgccactcaggatgatgggagctgcggtctgggtccacagtgtcccagt
cagtgcacgtgtatggattcagtggtacgctgcagcaacaaacacctgcaggctctgccc
agaggtctgccccggaacgtcaccgagctgtatctggatggtaaccagttcaccagtgtt
ccaaaagagttggcaacctttagattcctgcagctggttgatctgagcaacaataagatc
agcttcctgtctgatgactctttctccaacatgagccaactcaccaccctgattctcagc
tacaatgcgctccgttgcatacctccccgggcgctgagcggcctgcgctctctcagacta
ctttctcttcatggcaacgacatctcagagctacaacagggcatcttcaatgacgtggcc
tcattgtctcacctggctattggagccaaccctctgtactgtgactgtcggctcctctgg
ctgtctgactgggtgaagagtggctacaaggagcccggtattgcccggtgtgccggtcca
agtggcacagagggcaaactgctgctgaccactccgactgacagcttccagtgtaacggt
cccgtagagccgtctgttcgggccaaatgcagtccgtgtgtgtcctctccctgtcagaat
cagggcgtctgcagggacgaccacacacagctgttcacctgtacctgcaaacctggtttc
acgggtaaacactgtgagactccagttgacgcctgtgtcagtaatccctgcaccaacgga
ggtgtgtgtctgagtgatgaacagactagaggcttcagctgcgcatgtgcgtttggtttc
catggcaccttctgcgaggtgaatgtggacgactgtcaggatcatggctgtgagaatggc
gccacctgtgtcgacggtgttggcaactacacctgtttgtgttctccaaactacaaagga
cggttttgtgaggaggtcgacagtgtgtgttctccaggtaggaacccctgtcaccatcag
tccacctgcattagcactcctgttggccccaggtgtgtgtgtattccagggtgggtgggg
ccagagtgcagcattgattataatgaatgtgtggaccatcactgtcagaacggagctcag
tgcgttgaccatctggatggttacagctgcgcctgtccacaaggattcagtggtgagttt
tgtgaggtggctactcctcctgctgcttccccctgtcagctggctcagtgccagaacggc
gctctctgtgaggataagacggggatggcggcatgtcagtgtcagccaggcttcgagggt
caacgctgcgagaagctcgtcagcgtcaacttcatttacagggactcgtacgtccagctc
caagatgtaaagaactggccacatgccaacatcaccctacaggtgtcaacagcagaggac
aacggtgtcttgctctacaacggagacaatgaaccaatcgctgtggagctacatcagggt
cacgtcagggtgacctacgacccaggcaaccagcccgccaccactatctacagcatggag
acagtgaacgacggccagtttcacaccgtggagctgctgaccttcaaccagaagctgaac
ctgtctgtggatggaggcgaacccatgactctagatagtcaggggcggagccaggcagct
acaggggaggtgccactctatgttggcggtatgcctgaggaggtgttgccggcttctctg
ggtctctctgtccagatcctcaacacatccagtttccacggctgcatcaggaacctgtac
atcaaccacgagctgcaggacttcacccgcggccacatgaagccgggggtggtaccagga
tgccaggcctgccacaaactctactgcgttcacggcgtctgccggcctgacggcacgcag
ggcccccagtgtcactgtcatccaggctgggcaggactacactgtgatcagccggcaaca
gccgccctctctggagcagagggtgtcaccatggcaactggtgtcagcccatgtgcaggc
agcaagtgtgttaaaggggcgtgcatgactgtggatgcgaaccagtaccgctgtgactgt
gaggagggctacgagggagtgctttgccacctgcgaggcaggtcagccagctggtgtggg
ggtctccattgtgtgcggggtcagtgtgagcagttggcaggtgtggaacgctgcgtctgt
gaggagggatactccggacagaactgtgacatagagctgccgtgtggaggtgaaccggtc
agggattaccaccggatacggcgcggcaccgcactctgccagacggcaaagcccttctcc
tggttcgagtgccggggtcgctgcgcggtgggcggcgactcagcagctgccaccacttcc
tgttgtgcacccctgagagtcaggcgccggcggctcagcttcgagtgtgatgatgggaca
acgttcacgcaggatgtggagaagcctgtggaatgtggctgcaaagagtgtgtgtag
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integrated database retrieval system
