Takifugu rubripes (torafugu): 101061998
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Entry
101061998 CDS
T02386
Name
(RefSeq) fibronectin-like
KO
K05717
fibronectin 1
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04510
Focal adhesion
tru04512
ECM-receptor interaction
tru04810
Regulation of actin cytoskeleton
tru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101061998
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101061998
09142 Cell motility
04820 Cytoskeleton in muscle cells
101061998
04810 Regulation of actin cytoskeleton
101061998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tru04131
]
101061998
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tru04147
]
101061998
00536 Glycosaminoglycan binding proteins [BR:
tru00536
]
101061998
04990 Domain-containing proteins not elsewhere classified [BR:
tru04990
]
101061998
Membrane trafficking [BR:
tru04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
101061998
Exosome [BR:
tru04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
101061998
Glycosaminoglycan binding proteins [BR:
tru00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101061998
Domain-containing proteins not elsewhere classified [BR:
tru04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
101061998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
fn1
Pur_ac_phosph_N
fn2
NDNF
DUF5979
Motif
Other DBs
NCBI-GeneID:
101061998
NCBI-ProteinID:
XP_011609753
Ensembl:
ENSTRUG00000001374
LinkDB
All DBs
Position
1:complement(23783167..23804046)
Genome browser
AA seq
2503 aa
AA seq
DB search
MPGSNVARVLLALCIGSAVNCMPKGTHKSRRQAPQHHVPSISQDGCLENGRFYAVNDQWE
RPYLGSILVCTCHGVAGIKCKSKPEEEERCYDKINQQSYAVGETYERPKDGMIWDCTCIG
SSRGKISCTIANRCHEGGASYKIGDTWRRPHETGGYMLECVCLGNGKGEWTCKPVSERCY
DNSAGTSYVVGETWEKPYQGWMVVDCTCLGEGSGRITCTSRNRCNDQDTLTSYRIGDTWT
KTDSQGHLLQCLCTGNGRGEWKCERHASLYTTGLGTGSRVITNIQPAVYQPSATNPRLEG
PCRTESGVGYFNGQQWIKNQGTNQLICTCLGNGVSCVPWDGPAPVYGGNSDGQPCVFPFV
YKGKTYHSCTSAGRSDGQLWCSTSSDFETDQKYSFCTEKNVLVVTRGGNSNGALCQFPFI
YNGQNYTDCTAEGRRDGMKWCGTTTNYDDEQRFGFCPMAAHEEVCTASEGVMYRVGDQWD
KRHDILGHMMRCTCVGNGRGEWSCVAYSQLKDQCIVDGLTYEVNQTFTKQHEEGYMMNCT
CFGQGRGRWKCDAIDQCQEPETRGFYQIGESWDKVIHGIMYKCICYGNGIGELSCEPQQS
YPGGHRPVQVIITESGNQPNSHPIQWNAPQSAHINQYILKWRVKNTQSLWKEVLIPGHLN
SYTISGLKPGLTYEGQLISLLQFGRQEVTRFEFTTTYGSLATTQGETTQPPPVVDISESV
TEITSSSFVISWVSASDTVSGFRVEYELTEEGQGTGEPIVLDLPRTTTSVNINELLPGRK
YTVKVYEVTEGGEDNIILSTSQTTAPDAPSDHEVEDVGETSILISWEKPLAPITGYRVVY
TPSVEGESTELNLPDTATSVTLSDLLPGKLYNISIYAVEDTLESEPVFVQVHTAGDAVTE
EVVSPTDLQFFEISDKKIVLTWSGPSGDVSGYRVTVLPLDESGSLQRQMTLPISQNSYME
VSHLEPGTLYRFNIYTIRNGEESLPLIGEQTTKPDAPTDIHFANITEDRAVMIWFAPRAK
ITGYRLFLTVEDTTPLQLRLPSRLTQYTLLNLKPDTVYTATLHAEQDNILSKGETAQFTT
NPPMGNAPHFSTDVTDTSIVISWIPVPHIGYKLTVRPSQGGEAPRDMTSESGSIYISGLT
PGVEYTYSVQPVINGREQGTPITRRVVTPLSPPTDLVLESNPDTGELIVQWNGAPSTDIT
GYKVTCTPTNGQDGNSVEEFVEAGQNSCTLDNLIPGVEYNVSVVTVKDDMESTPVSTIVK
PDVPKLTDVTFQDVSDTTISLSWSPFNTTAITGYRITVMAAGESVPIFEDFVLPTTGKYT
VYGLEPGIDYDITVITVTENGESEPTTITQQTSVPAPTDLRFGLVGSDTMEVTWNSPRVP
NHADINAFLVRYHPIDDEDDMTEISVTDGSNKGVLRNLLPNTEYLVSVVCVYEQRESSPV
VGTQKTALDSPVDLRFSEIFTNSFTIHWLAPQSKITGYRIRYQMVSGGRSKDERLPPSRN
HFTLTGLNPDTEYLVSIYAVSRTEESLPLAGVQKTISDAPTDLEVLDSTPTSITVRWDAP
PVTVRYYRITHGETGGHSNPKEFTVPGSQSTATINNLKPGTNYTITVFAVTGRGDSPASS
TAIYVTHKTSVNSPSEMEVMTVKDNSVTVRWSPAQGPIKGYRVTGVPRDGEGTSFTEVVA
PDQTEFTFSGLMPTVEYVLSVHALGEDGESSPVVVNALTHVDHPKNLTFSEIDSTSMQIT
WYSPEGVVTSYRVLYSSPEEGERELLPAPRGDAESAIIYGLQPGTEYTIKVIALHDDTAS
TPLVGTQATAISPPINLQFSLVGPTSFTIHWTMPGQENHVTGLKGLTGYRVVVNPKNKSG
PTKEINLSPDSTQAHISGLLVATTYEVRLYALKNSLTSRAVQGEVTTQDNISPPRRVRIS
DVNDSAITLTWRSKTETISGFLIEATPTSSSTGYIPIQRTIEPSLRSYAITGLEPGTTYK
INIYTLKGNGRSAPFTLTATTAKPLVIPPTNIHFTSLNPNSISFTWEPSRSPGVTGYYIT
YEEAGGVPQEFVPRPHATQSYAIINGLKPGTEYVIKIVALQNALRSIALVGKARTQPITD
GQLLTPELPQLPVPHRPSTDILDVPESFTDKIFDSNHVHFAGTSGQNRPGQQGQHIYTEF
QNLGPNNGLYGPFGGPKEGQRPTLKEPLVYIPVAGPDGNRVPLVKVSDGPLSGVVFDFPN
NETEIPQEAQTITTISWKPFPQTLEYEVSCNPITHLEEQGFQMRLPGTSNSATLIGLTSG
ASYNVVVEAMTDGAKEKVLEEVVTVGNAVPGDIPITPNRDVCYDTFTQTYHEVGSEWERM
SETGFKLWCRCLGLGSGHFRCDSSKWCHDSGNNYRIGEKWDRHAENGHMMSCTCLGNGKG
EFKCEPHESTCYDDGKMYKVGNQWQKEYLGAICTCTCHGGQQGWRCENCKRPGSTDVNAD
VLHPVPSDAFDRYRENALRKLNIHCPIECLRPELLADVLNASD
NT seq
7512 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcagcaacgtagccagggtgctgcttgcgctctgtatcgggagcgccgttaac
tgcatgcccaaagggacgcacaagagtcggcgacaggcgccgcagcatcacgtcccatcg
atctctcaagatggttgcctagagaatggccgcttctatgccgttaatgaccagtgggag
cggccgtatttgggcagcatcctggtctgcacatgtcacggagtggctggcatcaaatgc
aaaagcaaaccggaagaagaagaaagatgctacgacaagatcaaccagcagtcctatgct
gtgggagaaacttacgagagacccaaagatggtatgatctgggactgtacttgtatcggc
tctagccggggaaagatcagctgcaccattgccaaccgctgtcatgagggcggagcatca
tacaagataggtgacacctggaggagaccccatgaaacgggcggctacatgttggagtgt
gtctgcctggggaacggcaagggcgagtggacctgcaaaccagtctccgagcgttgttac
gacaactcagctggaacatcctacgtcgtgggggagacatgggagaagccctatcaggga
tggatggtggtggactgcacgtgtctcggagaaggaagtggccgcatcacgtgcacatcc
agaaaccgttgcaatgaccaggatactttgacgtcctaccgcattggggatacttggacc
aaaacagactcccagggccacctgctccagtgtctgtgcacaggcaacggccgaggggag
tggaagtgcgagcgacacgcttcactttacaccactggcctgggtacaggttcccgcgtg
atcaccaacattcagcctgcagtctaccagccctctgcaaccaaccctcgcctggagggc
ccatgtcgcacagagtcgggcgtggggtacttcaacggacaacagtggattaagaaccaa
ggaaccaatcagctgatttgtacctgccttggcaatggcgtcagctgtgtaccctgggat
ggaccggctccagtctatggcggtaactcagacggtcagccctgcgtgtttcccttcgtt
tacaaggggaagacctaccactcctgcacctccgctggacgcagcgatggacagctctgg
tgctccacctcctcagactttgagaccgaccaaaaatattctttctgcacagagaagaat
gtgcttgtggtaacacgtggtggtaattccaatggagctttgtgtcagttcccattcatc
tataacggccaaaactacactgactgtactgcagaaggacgtagagatgggatgaaatgg
tgcggcaccacaacaaactatgatgatgagcagcgtttcggtttctgccccatggctgct
catgaagaagtctgcacagccagtgaaggggtgatgtatcgcgtcggggaccagtgggac
aagaggcacgatattctgggtcacatgatgcgatgcacatgtgttggaaatggtcgtgga
gagtggagctgcgtggcttattcccagctcaaagatcagtgtattgtggacggtctgacc
tatgaggtgaaccaaaccttcaccaaacagcacgaggagggatacatgatgaactgcacc
tgcttcggacaggggcgtggccgctggaaatgcgacgccatcgaccagtgccaagagccg
gagacgcggggcttctatcagatcggagaatcttgggataaggtcatacatggtatcatg
tataagtgcatttgctatggcaacggtattggggagctcagctgtgagcctcagcagtcc
taccctggtggtcaccgcccagtccaagtgatcataacagaatctggcaatcaaccgaac
tctcatcctattcagtggaacgccccgcagtccgcccacatcaatcagtacatcctcaaa
tggagagtgaaaaacacccagagcctttggaaagaggtgctgatccccggacacctgaac
tcctacaccatctctggcctgaagccaggcctcacctacgagggtcagttaataagcctt
cttcaatttggacgacaagaggtcacccgctttgagtttaccaccacctatggatcattg
gctacaacacaaggcgagaccacccagcctccgcccgtggttgacatctcggagtcagtg
actgaaattacctccagcagctttgtcatctcatgggtttccgcctccgacacggtttct
ggatttagagtggagtatgagctcactgaggagggacagggcaccggagaacccatcgtg
ctggatctgccacgtacaactacctcagtgaatataaatgagctcttgcctggaaggaag
tacaccgtgaaggtctatgaggtcacagagggcggagaagacaacatcattcttagtaca
tcacagaccaccgctcccgatgctccttctgaccacgaagtggaagacgtgggagaaact
tccattttgatcagctgggagaaaccactggctcccatcactgggtatcgcgtcgtctac
acgccctccgtcgaaggtgaaagcacggagctgaacctccccgacacggcgacatcggtg
actctgagcgacctccttcccgggaagttgtacaacatcagcatctacgccgtggaggat
acgctggagagcgagcctgtctttgtacaggtccacaccgctggagacgcagtgacagag
gaggtggtgtccccaacagaccttcagttctttgagatctcagataagaaaattgtcctg
acctggtcaggcccgtctggagatgtctcaggttaccgggttactgttttgcccctcgat
gagtccggctctctgcagagacagatgacgctgcccatcagccaaaattcctacatggaa
gtgtcacacttggagcctggaacgctgtatcgcttcaacatctacaccatccgcaacgga
gaggaaagtttaccacttattggagaacaaaccacaaagcctgacgcgcccacagatatc
cactttgccaacatcaccgaggacagagctgtgatgatatggtttgctcctcgtgcaaaa
attaccggctaccgactcttcctaaccgtggaggacacaacccccctgcagctgcgtctg
ccctcccgcctcactcagtacaccctgctcaacctgaagcctgacacggtgtacactgcc
acgctgcatgcagagcaagacaacatactgagtaaaggagaaactgctcagtttaccacc
aatccacctatgggaaacgctcctcatttcagtactgatgtgaccgacacctccattgta
atctcctggattcctgttccccacatcggatacaagttgacagtgcgccccagtcagggt
ggggaagcccccagagacatgacctctgaatcaggaagtatttacatttccggtctcact
ccaggagttgaatacacctacagtgttcagcctgtcatcaatggccgtgagcagggaacc
ccaatcacccgccgcgttgtcacacctctctctcctcccacggacctcgttctggagtcc
aaccctgacactggagaactcatcgtccagtggaacggagctcccagtacagacatcact
ggttacaaagtgacgtgcactccgactaatgggcaagatggaaacagtgtggaggaattt
gtggaggccggccagaactcctgcactttagacaacctcattccaggtgttgagtacaac
gtcagtgttgtgactgtcaaagatgacatggagagcacgcctgtgtccaccattgttaaa
cccgatgtccccaagctgacggatgtcaccttccaggatgtgagcgacacgaccatcagt
ctaagctggtccccgtttaacaccaccgccatcaccggctacaggatcacggtgatggca
gcgggggagagcgttccaatttttgaggattttgtcctgccaaccactggtaaatacaca
gtttatgggctggagcctggcatcgactatgacatcactgtgattactgtgactgaaaac
ggcgagagtgagcccaccaccatcacccagcagacctctgttcctgctccaactgatctg
cgttttggcctagtcggctcagacaccatggaagtgacttggaactctccccgcgttccc
aaccatgctgacatcaacgctttcctcgtcagatatcatcccattgatgacgaagatgac
atgacagaaatcagcgtaaccgatggcagcaacaaaggggttctaaggaacctcctgcct
aataccgagtatctggtgagcgttgtgtgtgtttatgagcagagggagagctcgcctgtt
gtcggcacccagaaaactgctctggactcaccagtcgatctgcgtttctctgagattttc
accaactccttcaccatccactggctcgctccccagagcaaaatcaccggctaccgcatt
cgctaccagatggtgagcggcggccggtccaaggatgagaggctgcccccctccaggaac
cacttcactctgactgggctcaatccggacaccgaatacctggtcagcatttatgctgtg
agccgcacggaggagagcctgccgctcgctggagttcagaagacaatctctgatgctccc
acagacctggaagtgcttgactccacccccaccagcatcaccgtccgctgggacgctcca
cctgtcaccgtgcgctactacaggatcactcacggagagacaggaggccacagtaacccc
aaagagttcacagttcctggatctcaatctactgcaacaatcaataatctgaagcctggc
actaattacaccatcaccgtctttgctgtgaccggcagaggagacagtcctgcatccagc
acggcgatctacgtcacgcacaagacaagtgtcaactctccctccgaaatggaggtgatg
acagtaaaagacaacagcgtgacggtgagatggagccctgctcagggcccaatcaagggg
tacagagtgaccggggtccccagagatggtgaggggacctccttcacagaggtggtggct
ccagaccagacagaatttactttctctggactgatgcccaccgtcgagtacgttttgagt
gtgcacgctcttggagaagatggagagagttctcctgtcgtggtgaatgctttaacacat
gtggaccaccccaagaacctgaccttctctgaaatcgattccacctccatgcaaatcacg
tggtacagccccgagggagttgtcacatcttaccgggttttgtattcgagcccagaggaa
ggcgagagagagctgctgcctgcgccaagaggagacgccgagtcggcgataatctatggc
ctgcagcccggcaccgagtacaccatcaaggtcattgcactgcatgatgacacagccagt
acaccgctggtggggacacaagctacagccatctccccacccatcaacctccagttctcc
ctggttggtcccacctccttcaccattcactggaccatgccgggtcaggaaaatcatgtg
actggtctaaagggcctcacgggataccgcgtggtggtgaaccccaaaaacaagagcggt
cctaccaaagagattaacttgtcccctgactccacgcaggcacacatctctggacttctg
gttgcaactacctatgaagttcgcctttatgccttgaagaattctctgaccagcagagcc
gtccaaggagaggttaccacacaagacaatattagccctcctcgccgtgtgcgcatttcc
gacgtgaatgactcggccatcactctgacgtggcgctccaagacagaaaccatctctggc
ttcctgatcgaagccacgcccacatcctcgtccacgggctacatacccattcagaggacc
atcgaacccagcttgcgttcatatgctattacaggtctggagccaggcaccacgtacaag
atcaacatctacacgctgaaagggaacggacgcagtgcaccgttcacactcactgccacg
acagccaagcctttagtcatcccacccaccaatatccacttcacctccctgaaccccaac
agcatctccttcacctgggagccgtcacgcagtccaggtgttactggctattatatcacc
tatgaagaggcaggaggtgtgcctcaggagtttgtccccagaccacacgcaactcagagc
tatgccattatcaacggtctgaaaccaggaacagagtatgtcattaagatcgtcgcctta
caaaacgctctgaggagtattgccctcgtgggaaaagccagaacacaaccaattacagat
ggacagctgttgacgcctgagctgccgcaacttccagtccctcatcgacccagcactgac
attttggatgttccagaatctttcactgacaaaatttttgactccaaccacgttcatttt
gctggaacgagtggccagaatcgtccagggcagcagggtcagcacatctacacagagttc
cagaaccttggtcctaataatggactttatggtcccttcggtggacccaaagaaggccag
aggccgactctcaaagaaccacttgtttatattcctgtagcaggccctgatggaaacaga
gttcccttggtcaaggtgagcgatggtcctctctcaggtgtggtgtttgatttccccaac
aacgaaacagagattcctcaagaagctcagactatcaccaccatctcctggaagcccttt
cctcagacgctggagtatgaagtgtcctgtaacccgatcacacacctggaggagcagggc
ttccagatgcgtctccctggaacatcaaacagtgccacgctgattggactaacatctgga
gcttcctataatgtggtcgtagaagctatgacagacggagctaaagagaaggttttggag
gaagtcgtgactgttgggaacgctgttccaggcgacatccccattaccccaaacagggac
gtgtgttacgacacatttacacagacctaccacgaggtgggctcagagtgggagcgcatg
tctgagacgggcttcaaactgtggtgccgctgtctgggcttgggcagtggtcattttagg
tgtgattcatccaagtggtgtcacgacagtggtaataactaccgtattggtgagaagtgg
gaccgccatgctgagaatggtcacatgatgagctgcacctgtctgggcaacggaaaggga
gagttcaagtgtgaaccccatgagtccacatgttacgatgatggaaaaatgtacaaggtg
ggaaaccagtggcagaaggaatatctgggtgccatctgtacctgtacttgccatggtgga
cagcagggctggcgctgcgagaactgtaaaaggccaggatcgacggacgtcaacgctgat
gtcctccatcctgtaccatcagatgccttcgatagatacagagaaaatgctctgcgtaaa
ctgaacatccactgtccgatcgaatgtttgaggccggagctgctagccgacgtcctcaac
gcctcggattaa
DBGET
integrated database retrieval system