KEGG   Takifugu rubripes (torafugu): 101065351
Entry
101065351         CDS       T02386                                 
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A
  KO
K12876  RNA-binding protein 8A
Organism
tru  Takifugu rubripes (torafugu)
Pathway
tru03013  Nucleocytoplasmic transport
tru03015  mRNA surveillance pathway
tru03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tru00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101065351 (rbm8a)
  09122 Translation
   03013 Nucleocytoplasmic transport
    101065351 (rbm8a)
   03015 mRNA surveillance pathway
    101065351 (rbm8a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tru03019]
    101065351 (rbm8a)
   03041 Spliceosome [BR:tru03041]
    101065351 (rbm8a)
Messenger RNA biogenesis [BR:tru03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     101065351 (rbm8a)
Spliceosome [BR:tru03041]
 Complex C
  Other components
   EJC/TREX
    101065351 (rbm8a)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5 RRM_7
Other DBs
NCBI-GeneID: 101065351
NCBI-ProteinID: XP_003965692
Ensembl: ENSTRUG00000013173
UniProt: H2U993
LinkDB
Position
7:2385668..2388016
AA seq 173 aa
MADVLDLHEAGGEDFPMDEDESIHKLKEKAKKRKGRGFGPEEGARSRVKEDYDTVEQDGD
EPGPQRSVEGWILFVTGVHEEATEEDIHDKFSEFGEIKNLNLNLDRRTGYLKGYALVEYE
TYKEAQAAMEGLNGQDMMGQPISVDWGFVRGPPKNKRRTGGRRRSRSPDRRRR
NT seq 522 nt   +upstreamnt  +downstreamnt
atggcggacgtgctcgatcttcatgaggcgggaggcgaggactttcctatggacgaagat
gaaagcatccacaagttaaaggagaaagcaaagaagagaaaaggccgaggctttggtcct
gaggagggtgccaggtcaagggtcaaagaggactatgatactgtagagcaggatggggat
gagccagggcctcagagatctgtggagggctggatcctgtttgtgaccggcgtacatgaa
gaagccacagaggaagacatccatgacaagttttctgagtttggagaaatcaaaaacctg
aatcttaatctggatcgtagaacaggctacctgaagggatatgcactggtggaatatgag
acctacaaagaggcccaagcagcgatggaagggctcaatggtcaggatatgatgggtcag
cccatcagcgttgactggggattcgtcagagggccccccaagaacaagcgcagaactggg
gggcgcagacgtagcaggagtccagacaggaggcggcggtaa

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