Takifugu rubripes (torafugu): 101069468
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Entry
101069468 CDS
T02386
Name
(RefSeq) low-density lipoprotein receptor-related protein 5-like isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04150
mTOR signaling pathway
tru04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
101069468
04150 mTOR signaling pathway
101069468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tru04131
]
101069468
Membrane trafficking [BR:
tru04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
101069468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
DUF5050
SGL
cEGF
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
101069468
NCBI-ProteinID:
XP_029697134
Ensembl:
ENSTRUG00000017350
LinkDB
All DBs
Position
9:complement(29821..46896)
Genome browser
AA seq
1669 aa
AA seq
DB search
MRGCVCRTRDMGSALLLVQLLVLLPAAHALPLLLFANRRDVRLVDAEGARGESAVVVSDL
VDAAAVDFLYTEGIIFWTDVSEEAIKQTYWNLSSNSLTDALGTGQTVVVSGLASADGLAC
DWLGKKLYWTDSETNRIEVSNLDGTSRKVLFWMDLDQPRALALNPAQRYMYWTDWGEKPR
IESAGMDGSNRKVLVNQNIYWPNGLTIDLLEHKLYWADAKLSFIHRANLDGSAREAVVEG
ILTHPFALTLSGETLYWTDWQTRSIHACNKQKGDNIREILSGIFSPMDIQVLDPSRQPYL
QTPCGDNNGNCSHLCLLSPVEPFYSCACPTGVQLKPDGKTCKPGAEHVLLLARRTDLRKI
SLDLPDFSDIVLMVDDIRHAIAIDYDPVEGFVYWTDDEIKAIRRAHIDGNTSAMLVATEL
KHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILISENIDEPRAIVLDPVNGYMYW
TDWGQQPKIERANLDGTDRVVLVDSYLGWPNGLALDYSTGKLYWGDAKTDKIEVIDVDGT
NRQTLLDDNLPHLFGFTLLGDFIYWTDWQMRSIERVHKVTAARETIIDQLPDLMGLKATN
VTETHGTNDCALNNGGCSHLCFWCQRAVRCACPMGMELLSDLHTCVVPEAFLLFTNRDSI
RSISLGTHGNDVAIPLTGVKEVSALDFDVSERRIYWTDIQAKTITRAYMNGSSVEHVIEY
GLDYPEGMAVDWMGRNIYWADTGTNRIEVARLDGRYRQVLVCKDLDNLRSLDNPRSLALD
PASGYMYWTEWGGRPRIARAYMDGKTTTTLVDEVGRANGLTIDYVAHRLYWTDLDTSMIE
STNMQGLQRQTIVEELSHPFGLTQYQDFIYWTDFNLRSIERADKRTGLNRTVVLQGQLEL
MLDILVFHSSRQEGGNTCSLNNGNCAHLCLATPAGAQCCCASHYTLNSDGQNCSAPTSFL
LFSQKSGISRMVPGDPSPDIILPIHVLRNVRAVSYDPVDQLVYWLDGRQNIRRASDDGTT
SSVTVNANSQSADGQIHDLSLDPYSRHIYWTCETTNTINIQKMSGQHVGVVLKDDANKPR
AIVVSAEKGYMYFTTIQERSAKIEAASLDGTERECLFATGLFRPVALALDTAAGKLFWVD
SDLKRIESSDLTGANRIVLQDSSILQPAGLTVLGDHLYWIDRQQQIIERVDKLTGDGRTR
IQGRLASLTSIHAAESVARQHLENHPCFRDNGGCSHICIAKLDGTPRCSCPVHLVLLQDL
LQCGEPPTCSTEQFTCTTGEIDCIPLAWRCDGFTECADSSDEENCPVCSPLQFKCDRGGC
IDAHRRCNGEHDCADQSDERDCQTICPPNQFRCGDNQCISKKQQCDTYSDCSDGSDELSC
GKRIVLRRPLSTRSLLHLLLLWFLDADPPGHGAGSGPNAIVSVIAIILLVFVIGGAYFFC
QRVVCRCYKGQSGSFPHEYISGTPHVPLNFIAPSGSQRGTFQGISCGKSMMSSISLMGSS
SSGAPLYDRNHVTGASSSSSSSTKGAFYPQMLNPPPSPATDRSLYNTEVFYSSNSPSSTR
SYRAYHPGRGAAPPTTPCSTDVCDSDYTPHHPPGALASSGRRWRASGHGSLGKHKYYVDL
NSDSDPYPPPPTPRSQYLSAEESCPPSPSTERSYFHLCPPPPSPCTDSS
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atgcggggctgcgtgtgtaggacccgggacatgggctccgcgctgctgctggtccagctg
ctggtcctgctgccggcggctcacgccttgcctctccttctctttgccaaccggcgcgac
gtccggctggtggatgcagaaggcgctcgcggcgagtcggccgtggtggtcagcgaccta
gttgacgcggcagccgtcgacttcctgtacacagaaggaataatattttggacagacgtg
agtgaggaggccatcaagcagacctactggaacctgtcgtccaactctctgacagacgct
ctgggaacgggccagactgtggtggtatcgggcctggccagtgccgatggactggcctgt
gactggttgggtaaaaagctttactggacagactccgaaaccaatcggatcgaagtgtcc
aacctggacggcacatccaggaaagtcctcttctggatggatttggaccagccgcgtgct
cttgctctcaacccggctcagcggtacatgtactggaccgactggggggagaagcccagg
atagagagcgccggtatggatggcagcaacaggaaggttctggtgaaccagaacatctac
tggcccaacgggctgacgattgacctgctggagcacaagctttactgggcggacgccaaa
ctcagcttcatccacagagccaacctggacggctcagcacgggaggcggtggtggagggc
atcctgacccacccctttgctctaacgctgtctggggagaccttgtactggaccgactgg
cagacccgctccatccacgcctgtaacaagcagaaaggagacaacatccgtgagattctc
agtggaatcttctcccccatggacatccaggtcctggatccttcccgacagccctacctt
caaaccccctgcggagataacaacggcaactgcagccatctgtgtctgctctctccggtc
gagcccttctacagctgcgcctgccccacgggagtccagttaaaaccagacgggaagacc
tgcaagccaggagcagagcacgttcttctgctggcccgccggactgacctgaggaagatc
tcacttgacctccctgacttcagcgacatcgtgctgatggtggatgacatccgccacgcc
atcgccatcgactacgacccggtggagggtttcgtctactggacggacgatgagatcaaa
gccatccgccgagcccacatcgacggaaacacgtcggcgatgctcgtcgccaccgagctc
aaacaccccgatggcatcgccgtggactgggtggccaggaacctgtactggaccgacacc
gggaccgaccgcatcgaggtcaccaggctgaacggaacctcgcgaaagattctgatttcc
gagaacatcgacgagcccagagccatcgtgctggaccctgtgaacggttacatgtactgg
accgactggggacagcagccaaagatcgagcgggcgaacctggatggaacggatcgggtc
gtcctggtcgacagctatctgggctggcccaatggactggcgctggactattcaactggg
aaactgtactggggggacgctaaaactgacaagatagaggtgatcgacgtggacggcacc
aacagacagacgctgctggacgacaacctgccgcacctgttcggcttcaccctgctgggc
gacttcatctactggaccgactggcagatgcgcagcatcgagagggtccacaaagtcacc
gccgcccgggaaaccatcatcgaccagctgccagacctgatgggtctgaaggccaccaac
gtcacagagacccacggtacgaacgactgcgccctcaacaacggcggctgcagccacttg
tgcttctggtgtcagcgggcggtccggtgtgcctgtccgatgggaatggagctgctgtcg
gacctgcacacctgcgtggttcccgaggccttcctgctcttcaccaacagggacagcatc
aggagcatctctttaggtacccatggcaacgatgtggctatccctctgacgggagtcaaa
gaagtctccgctctggacttcgacgtgtcagaaaggagaatttactggaccgacatacaa
gcgaagaccatcaccagagcgtacatgaacggaagctccgtcgaacatgtcatcgaatac
gggctggactatccggaaggcatggccgtggactggatgggtcggaacatctactgggct
gataccggcacgaaccgcattgaggtggcccgcctggacggccggtacagacaggttctg
gtctgcaaggacctggacaacctacgctcactggacaatccccgttccctggcgctggat
ccagccagcggttacatgtactggacagagtggggcgggcggccccgcatcgcccgggcg
tacatggacgggaagaccaccaccaccctggtggacgaagtgggccgggccaatggtctg
accatcgactacgtggctcatcgtctctactggacagacctggacaccagcatgattgag
agcaccaacatgcaaggtcttcagcggcagaccatcgtggaagagctgtcccaccccttc
ggtctgactcagtaccaggactttatttactggacggactttaacctgcgcagcatcgag
cgagcggacaagcgcacggggctcaaccgcaccgtggtgctgcagggccagctggagctc
atgttggacatcctggtcttccactcgtcccgtcaggagggcgggaacacgtgctcgctc
aacaacggcaactgcgctcacctgtgtctggcgacccctgctggagcccagtgctgctgc
gcctcccactacacgctgaactctgacgggcagaactgcagcgctcccaccagcttcctc
ctctttagtcagaagtccggcatcagcaggatggtcccgggagacccgagtcctgacatc
atccttcccatccacgttctacggaacgtccgtgcggtcagctacgacccggtggatcag
ctggtttactggctcgacgggcggcagaacatccgcagggcgagcgatgacggaaccacg
tcgtccgtgaccgtgaacgccaacagccagtcggcggacggccagattcacgacctgagc
ctggatccctacagccgccacatttactggacctgcgagaccaccaacaccatcaacatc
cagaagatgagcggacaacacgtgggcgtggtcttgaaggacgacgccaacaagccgagg
gccatcgtggtcagtgcggagaaagggtacatgtacttcaccaccatacaggagcgctcg
gccaagatcgaagcggccagtttggacggaaccgagagggagtgtctgtttgccaccggg
ctgttccgacccgtggctctggcgctggacaccgcagcagggaagctcttctgggtcgat
tctgatctgaagcgcatcgagagcagcgacctgacgggagccaatcgcatcgtcctccag
gactccagcatcctgcagccggcgggcctgacggttctgggcgaccacctgtactggatc
gatcggcagcagcagataatcgaacgggtggacaagctgaccggagacggacggacccgc
attcaggggcggttggcgtccctgacgtccatccacgccgcggagtcggtggctcggcag
cacctggaaaatcacccttgtttccgtgacaacggaggctgttctcacatctgcatcgcg
aaacttgacggcactcctcgctgctcctgtcccgtccacctggtcctactgcaggacctg
ctgcagtgcggagaaccgcccacctgctccaccgagcagttcacgtgcaccacgggcgag
atcgactgcattcctctggcgtggcgctgcgacggattcaccgaatgcgccgacagcagc
gacgaggaaaactgccccgtgtgctcgccgctgcagttcaagtgcgacagaggcggctgc
atcgacgcccacaggcgctgcaacggcgagcacgactgtgcggatcagtcggacgagcgc
gactgtcagaccatctgcccccccaaccagttccgctgtggtgacaaccagtgcatttcc
aagaagcagcagtgtgacacctactcggactgttctgacgggtcggacgagctgtcctgt
ggtaaacgcatcgtcctgcgccggcccctttccacgcgctcgcttctccatcttcttctt
ctctggttcttagacgccgacccgccgggccacggcgccggcagcggccccaacgccatc
gtctccgtcattgccatcatcctgctggtcttcgtcatcgggggggcgtatttcttctgc
cagcgggtggtgtgtcgctgctacaaaggccagagtgggagcttcccccacgagtacatc
agcgggacgccacacgtgccgctcaatttcatcgcccccagcggctcccagcgaggaacc
tttcaaggtatttcctgtgggaagtccatgatgagctccatcagcctgatgggcagcagc
agcagcggggcgccgctctacgacaggaaccatgtgaccggagcctcgtccagcagctcc
tcttccaccaaaggagccttctacccacagatgctgaacccgcccccgtctccagcgacc
gaccgctccctctacaacaccgaggtcttctactcctccaacagcccgtcctccaccagg
tcctacagagcctaccacccgggtcgcggtgcggccccgcccaccacgccctgcagcacc
gacgtctgtgacagtgactacaccccccaccacccgcccggcgcgctggcctcctcgggg
cgccgctggagggcttcgggccacggcagcctgggcaaacacaagtactacgtggacctg
aactcagactctgacccctaccctccgccccccaccccccgctcccagtacctgtcagca
gaggagagttgccccccttctccctccacggagcgctcctacttccacctgtgcccccct
ccgccgtcaccctgcaccgactcctcgtga
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integrated database retrieval system