Takifugu rubripes (torafugu): 101071378
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Entry
101071378 CDS
T02386
Symbol
rnf8
Name
(RefSeq) E3 ubiquitin-protein ligase RNF8 isoform X1
KO
K10667
E3 ubiquitin-protein ligase RNF8 [EC:
2.3.2.27
]
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tru04121
]
101071378 (rnf8)
03400 DNA repair and recombination proteins [BR:
tru03400
]
101071378 (rnf8)
Enzymes [BR:
tru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101071378 (rnf8)
Ubiquitin system [BR:
tru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101071378 (rnf8)
DNA repair and recombination proteins [BR:
tru03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
101071378 (rnf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FHA
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
zf-RING_2
Yop-YscD_cpl
zf-C3HC4_4
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-ANAPC11
Ndc1_Nup
Spc29
zf-RING_10
DNA_topoisoIV
pAdhesive_17
Peptidase_M32
Motif
Other DBs
NCBI-GeneID:
101071378
NCBI-ProteinID:
XP_011610481
Ensembl:
ENSTRUG00000005824
LinkDB
All DBs
Position
16:complement(10388099..10391546)
Genome browser
AA seq
513 aa
AA seq
DB search
MESVATNSSVAEEEDDGDSDVSCLMRVGRNSDWLRFYENSEITVGRGLDVTYQLLSPSCP
LMISRLHCTFRQRDDGQWTVTDKKSLNGVWVNGSRIPAEEAHQLKLGDSIQLGVPIIGSE
VEFNYVLVKRPLKDIKEFFLKGPKDSPKVVILPKKPKRKLVVEEVEPSTSKPKLYRCSSA
GKTFAKACPLSPVKCKQKLGHIQTQQCGASRGAQEVDQPSHILCDTDNLQTYSQNILILR
RQVDSTQKQVESLGEEPQQTDPLREVQVRELQAQLETLRSKMHQMEALERSFSQTQQQLE
AQKTQQEEKLMKKKLQDALQEQKKVIDELALSRQAYEEILFAKNKELEVTKEEKEKACAQ
KEEVVTQVTEVLENELQCIICSELFIEAVILNCAHSFCCYCIKQWRKKKDECPICRQAIL
SQTRCLALDNCINSMVENLSLDMKARRQTLIAERKEPDSAEVMVISDGENEDTLDSSWSS
DSEYSLVTIDSSIHLDSSPFSICSLESCDESED
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggagagtgtggcgaccaattcttctgtggctgaggaggaagacgacggagactcggat
gtgtcttgtttaatgagagtcggcagaaattcagactggctccggttttacgagaactcc
gagataacagttggtcgtggattggacgtaacctaccagttgttgtccccaagttgtcct
ctgatgatctccagactccactgcaccttcagacaaagggacgatggccagtggacagtc
acggacaagaagagtcttaatggagtttgggtgaacggaagccggatacctgctgaggaa
gcccatcagctgaagcttggagactccatacaacttggggttcccatcattggttctgag
gtggagtttaactacgttcttgtaaaacggcctctcaaagacattaaagagtttttccta
aagggaccgaaagattcccccaaagtagtcatccttccaaagaaacctaagagaaagtta
gtggtggaagaagttgagccatccacctcaaagcccaagctttaccggtgctcttcggca
ggcaaaacctttgcaaaagcgtgtcctttatcaccggtgaaatgcaaacaaaagctcggt
cacatccaaacacaacaatgtggagccagcagaggagcccaggaagtggaccagccctct
catatcctgtgtgatacagacaacttgcagacgtacagccagaacatcctgattctgagg
cggcaggtggacagtacccagaaacaggtagaatcgctgggcgaggagcctcagcagacc
gaccctctcagagaagtgcaggtcagggagctgcaggctcagctcgagaccctcagatct
aagatgcaccagatggaggcgctggagaggtctttcagccaaactcaacagcagctagaa
gcacagaaaacgcagcaagaagagaagctgatgaagaaaaagctacaggatgccttacaa
gagcaaaaaaaggtaatcgatgaactcgccctttcccggcaagcctatgaagaaattctc
tttgccaaaaataaagaacttgaagtaacaaaggaggaaaaagaaaaggcgtgcgcccag
aaggaagaggtggtgacacaagtgactgaagttctggaaaacgagcttcagtgcatcatc
tgttccgagctcttcattgaggcagtcatcctgaactgtgctcacagcttctgctgttat
tgcatcaagcagtggcggaaaaagaaagacgagtgccccatctgccgacaggccatcctc
tctcagacccgctgcctggctctggacaactgcatcaacagcatggtggaaaacctcagc
ctggacatgaaggcgcggcggcagacacttattgctgagcggaaagaacctgactccgct
gaggtgatggtgatcagtgacggcgaaaacgaggacacgctggacagcagctggagcagc
gacagcgaatacagcttggtgaccatcgacagcagcatccatctggactccagccccttc
agcatctgttctcttgaaagctgcgatgagtcagaggattag
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integrated database retrieval system
