Takifugu rubripes (torafugu): 101071614
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Entry
101071614 CDS
T02386
Symbol
rad54l2
Name
(RefSeq) helicase ARIP4 isoform X1
KO
K10876
RAD54-like protein 2 [EC:5.6.2.-]
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tru03400
]
101071614 (rad54l2)
DNA repair and recombination proteins [BR:
tru03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
101071614 (rad54l2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
101071614
NCBI-ProteinID:
XP_011612169
Ensembl:
ENSTRUG00000013962
LinkDB
All DBs
Position
19:9109565..9120641
Genome browser
AA seq
1486 aa
AA seq
DB search
MSEDAVSESDLDTSLISEEEYLENEEEEDMEEEENENDGDDEDDSERPGSSQSQSAHQDD
RGSTSSASREPSSEPSSRPSSRSSPRPPGSPENTSQSKPPSSKIKKQKPSKGNKSSKSSK
ASKTSKPAHMRKNIRKLLKEDQLEAGTKTAQQEEMDRRKRLEQQRKEFPAPAPVVPDSQL
VDTASLLGEVSHLVPDLLSKQDVICLDSSGDEDEKVDSKVPTLGLRDDIIELSSGDEDSL
QISSESADEDAHGTAGTEESSGAHINDALNLPDAHGRVLVNINHPAEEKDLYLAPQLARA
VKPHQIGGIRFLYDNLVESLERYKTSSGFGCILAHSMGLGKTLQVISFIDVLMRNTETHT
VLAIVPVNTIQNWLTEFNLWLPAQESLPPETDPTVITGRSFNVHVLNDEHKTTLARAKVV
EDWSRDGGVLLMGYEMYRLLTMKKSFVMGKRRKSKKPTGPVIIDLDEEDRQQELMKGIER
AIARPGPDVVICDEGHRIKNYHASTSQALKNIRSRRRVVLTGYPLQNNLLEYWCMVDFVR
PDFLGTRQEFSNMFERPILNGQCIDSTPQDVRLMRYRSHVLHSLLEGFVQRRGHDVLRDQ
LPSKQEHVILVRLSPIQRALYTEFMKRFREAGNTGWLGLNPLKAFCVCCKIWNHPDVLYE
ALQKENQANEQDLDLDDITSAGNPRCPAPGSGLKAKVADPCNSKNNTTLPINHTQDRANQ
VITYEWAKDIMSSYHMGILENSAKMVLLFHLIEESVKKRDKLLVFSQSLSTLTVIEDFLS
KRPMPSGIASSEPRSQNWVRNLNYYRLDGSTSASERERLINQFNDPENKAAWVFLLSTRA
GCLGVNLIGANRVVVFDASWNPCHDAQAVCRVYRYGQRKPCFIYRLVCDFTLEKKIYDRQ
VSKQGMSDRVVDDLNPGLNFTRKEVESLLHFVEEEAGQFNLAIQEDFEEVIYQACKLYPH
LVTKEPFHHESLLVDRKESKLTKAEKRAAKKSYEDEKRASVPYSRPSYAPYYPTSDQALS
NMPMFNQRGWRHVSRPDDKPVASVRPIQSTPIPMMPRQVGVGMAGSSSSGSLPVNFLQKA
GVQVQRIVTTTDIVIPGSNSTTDVQARINAGESIHIIRGSKGTYIRTNDGRIFAIRSGKL
GRGTVGDHVVPRDNPSFLSHPVSNGCSSPVNQQQHSSNGEQQPSSPLSSEILTEFSRYAA
SSGAGGTRNEMPSPSDTSSTPAGNEALQNNETLDLSRQLSDHLLSSGLEVRGGKRRSSEN
QGNPQAGVKRSSAAAHFPGMSMGSSGLSFPPMGLNSSSILGNLSHMSHPLLMSGGGGSSF
LQPSGQARADLQSIFPSAGSDLLRHSVTGNGHIPTPSSSSLPTVFSSASTTSPMSSSSTA
APSSSLASGSLPPYLMNPNMTSLLSSGFPLNYCQSLLSEPRMFPNPLLSGSGGFPVPNSN
SQGLLSHFNNPTSSLLGAALSQPDRREDTENGGSSSDDDVIEVMGQ
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagacgcagtttcagaaagtgacttggacacgagccttatcagtgaagaggag
tatcttgagaatgaggaagaggaagacatggaagaagaggaaaatgaaaatgatggcgat
gatgaagatgatagtgaacgccctggcagttcacagagccagtcagcacaccaagatgac
aggggctccacctcatctgcttccagagagccatcatcagagccttcatctcgcccatcc
tccagatcttcccccagacctccaggcagtccagaaaacacaagccagagcaagccacca
tccagcaaaatcaaaaaacagaaaccatctaaaggaaacaaatcatcaaagtcatcaaaa
gcctctaaaacctccaagcctgcccacatgagaaagaatattagaaaactgttgaaggag
gatcagttggaggctggaaccaagacggctcaacaggaggagatggacagacggaaacgt
ctggagcagcagaggaaagagtttcctgctccggctcctgttgttccagactcccagcta
gtagatactgcttcgcttttaggagaagtttctcacttggttccagatttgctgagcaag
caggatgtaatctgtctggacagtagtggtgatgaagatgaaaaagtggactccaaggtg
cctacgcttggtctcagagatgatataattgagctcagttctggggatgaagattcccta
cagataagcagcgaatcagctgacgaagatgctcacggcaccgctggtactgaagagagc
agtggagcacatatcaatgatgctctgaatctgccagacgcccacggtcgtgtgcttgtt
aatatcaaccaccctgcagaggagaaagacctttaccttgctccacagctcgccagggct
gtcaaaccccaccaaatcggtggaatccgttttctttatgataaccttgttgagtctctg
gaacggtataaaaccagcagtgggttcggctgcatcctcgcacacagcatggggttgggc
aagactctgcaggtcatttccttcattgatgtcctaatgaggaatactgagactcacact
gtgctggccattgttcccgtgaacacaattcagaactggttaacagagtttaacctgtgg
ctcccagctcaggaatccctcccaccagaaactgaccccacagtcattactggccgatca
ttcaatgttcacgtcctcaatgatgagcacaaaacaacactggcgagggccaaggtggtg
gaggactggtccagagatggaggggtgttgctgatgggttatgagatgtaccgtctgctg
accatgaagaagagctttgtgatgggcaagaggaggaaatcaaagaaacctacagggcca
gttatcatcgacttagatgaagaagatagacagcaggagcttatgaaaggtattgagagg
gccattgcaaggcctggacctgatgttgtgatatgtgatgaaggtcatcgcatcaagaat
taccatgccagcacatcacaggcccttaagaacattcgctcccgacgcagggttgtcctg
acaggttaccctttgcagaacaaccttcttgaatactggtgcatggtggactttgtcaga
ccagactttctgggcacacgtcaggagttcagcaacatgtttgagcggccgattctgaac
ggacagtgtatagacagcacgcctcaagatgttcgcttgatgcgctaccgcagtcacgtg
cttcacagtctgctggagggttttgttcaaagacgtggccatgatgtgctgcgagaccag
cttccttctaagcaggagcatgtgattttggtgcgcctttctcccattcagagagcattg
tatactgagttcatgaaacgctttagagaagcaggaaacactggctggctgggtctaaac
ccactcaaagctttctgtgtatgttgcaagatttggaatcacccagatgtactctatgaa
gctttgcagaaagagaatcaggcaaatgagcaggacctggacctggatgacatcacttca
gctggtaacccccgctgccctgcacctggttccggactcaaagcaaaagtagcagatcca
tgtaacagcaaaaacaacaccacgctgccaatcaaccacacccaggaccgagccaatcaa
gttatcacatatgaatgggcaaaggacataatgtcaagctaccatatgggaattctggaa
aactcggctaagatggttctgcttttccatctgattgaggaaagcgtcaaaaaaagagac
aaacttttggtctttagtcaaagtttgtccactctgactgtcattgaggactttttgtcg
aagcgacccatgccttcaggaatcgcctcctctgagcccaggagccaaaactgggtccgc
aacctcaattactacagactggatggaagcacatcagcctcagaaagagaacgactcatc
aatcagtttaatgacccagaaaacaaagcagcttgggtcttccttctttccacaagagcg
ggttgcttgggggtaaacctgattggagctaaccgtgtggtggtgtttgatgcctcctgg
aacccatgtcatgatgcccaagcagtgtgtagggtgtatcgatatggccagaggaaaccc
tgcttcatttatcgccttgtctgtgatttcaccttggagaaaaaaatctacgacagacaa
gtctcgaagcagggcatgtcagaccgagtggttgacgacctgaatccgggtctcaacttc
actcgtaaggaagtagagtcactgctgcattttgtggaagaggaagcaggccagtttaat
ctggccatccaggaggattttgaagaagtcatttaccaggcttgtaagctttacccacac
ctcgtcactaaggaaccttttcatcatgagtctcttctggtggaccgtaaggagtctaaa
ctgacaaaagcagagaagagagctgccaagaagagttacgaggatgagaaacgggcctct
gtgccctactctcgcccatcatatgccccttattacccaaccagtgaccaggccctctca
aacatgccaatgtttaaccaacgtggctggcgacacgtctcaaggccggatgacaagcct
gtagcgagtgtcaggcccatccagtccaccccaatccccatgatgccccggcaggttggc
gtgggcatggcgggctccagctcttctggaagcctgcccgtcaactttctacagaaagct
ggagttcaagtgcaaaggattgtcaccactacagatattgtaatcccaggatccaacagt
acaacagatgtccaagctcgaattaatgccggagagagcatccacattatcagaggatcg
aaaggcacctacattaggacgaacgatggaagaatttttgctattcgatcaggaaaatta
ggtagaggaacagtaggggaccatgttgtgcccagagacaacccgagttttctcagccat
cctgtaagtaatggctgctcatcacctgtgaatcagcagcagcactccagtaatggggag
cagcagccatcctctccattaagctcagagattctcacagagttcagccgctacgccgca
tcatccggggccggtggcaccaggaacgaaatgccatctccatccgacacttcgagcaca
ccggcgggaaatgaagctttacaaaacaatgaaactcttgatctcagtagacaattaagc
gaccaccttctgagctcgggtttggaggtgcgtggcggtaaacgacgaagcagcgaaaac
caaggcaacccacaagcgggagtcaagcgctcctctgctgcagcacatttccctggaatg
tccatgggatctagtgggctcagttttccccccatgggtctgaactcctcatccatactg
ggcaacctcagccacatgagccaccccctcctgatgtctggcggtggtgggtcatccttc
cttcagccgtcagggcaagcacgagctgacctacagagcattttcccctctgcaggttca
gacttactgagacattctgttacaggaaacggacacattcccaccccctcctcatcatcg
ctgcccaccgttttctcatctgcttccaccaccagccccatgtcatcctcatcgactgca
gcgccttcctcctctctggcgtcaggttctctgcctccatacctgatgaatccaaacatg
acaagcctgctgtcgtcaggcttccccctcaactactgtcagtcgctgctgtctgaaccg
aggatgttccccaaccctctcctctccgggtcaggggggttccctgtgcctaactccaac
tctcaaggtctcctctcacattttaacaatcccacttccagcctgttgggggcagctctc
tcccagccagacagacgcgaggacacagaaaacggcggcagcagttctgatgacgacgtc
atagaggtgatgggacagtag
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integrated database retrieval system