Takifugu rubripes (torafugu): 101072134
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Entry
101072134 CDS
T02386
Symbol
ldlr
Name
(RefSeq) low-density lipoprotein receptor isoform X1
KO
K12473
low-density lipoprotein receptor
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101072134 (ldlr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tru04131
]
101072134 (ldlr)
Membrane trafficking [BR:
tru04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
101072134 (ldlr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
Motif
Other DBs
NCBI-GeneID:
101072134
NCBI-ProteinID:
XP_011611386
Ensembl:
ENSTRUG00000002369
UniProt:
A0A7G7XWQ0
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Position
17:complement(16687968..16697777)
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AA seq
856 aa
AA seq
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MLEPRRRLAGLSCWCLLMLMFFSPAADAAFICSSTQFKCGNGRCITSRWICDGTDDCGDG
TDELQETCASKTCLPSEYNCGAPLNQCIPGGWHCDDKADCGNGADERNCTAKECKDNEFQ
CANGHCVSASFVCDKDDDCSDGSDEASCPKPTCSGRSFQCNNSVCVPAQWRCDGDSDCAD
GSDEWPQNCDGRQKKPASRCSRHEFQCADGECIHGSWRCDGGTDCKDRSDEVNCSRSRCP
GDQFQCFDGTCIAGTLQCDGKHDCSDLSDELGCHIARACEGPAMFKCNTGECISMEKVCN
KQRDCVDNSDEPDEECDRNECQTNNGGCSHYCSDLKLGFNCSCPAGYSLKMDKKTCEDID
ECAEPDTCSQVCINLVGSYKCDCMGGYQIDPLTKTCKAQSGVVPMLYFTNKHDVRRMTLD
RSEYVRLIPQLKNVVALDIDMPNKTIFWSDLSLKKIYSSKIDTAGNSSHHTVVIDSGIGA
PEGLAVDWIHGNIYWIDSALQTISVATTDGSRRKTLITENLEKPRAIVVDPINNFMFWTD
WGQQAKIEKCGLNGMDRIALVTDNIVWPNGITLDVSNHRLYWVDSKLHTLSSIDVNGGTR
HSVLFSEEHLSHPISLTVFQNQVFWTDMDHSAVMSANRLTGRDIRTLAVELDQPEDIILY
HDLKQPTGTNWCSQGNGLNGGCEFLCLPAPLINQRSAKFTCACPDDMFLGSGMRECVKSP
VAPPDASTTEAPLQPNAPTTKAPFATTARTPPQTGPTRQAAATAQGNKLAAVPGEAPSSH
PVALYVVLPMMVTALVVFGAVLVWRHWRLRNTNTIHFDNPVYQKTTEDELHICRNGSDGY
IYPERQMLSTDDIDVA
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgttggaaccgcggaggagactcgccgggctctcgtgctggtgtctgctgatgctgatg
ttcttctctcccgcagcagacgccgccttcatttgcagctccactcagtttaagtgtgga
aatgggaggtgcatcaccagcaggtggatttgtgatggaacggacgactgtggggatgga
actgatgaactccaggagacctgcgcgtctaaaacctgtctgccgtccgagtacaactgt
ggcgctccgctgaaccagtgcatcccaggagggtggcactgcgacgacaaggctgactgt
ggcaacggggccgacgagagaaactgcactgccaaggaatgcaaggacaacgagtttcag
tgtgccaacggccactgtgtctccgcctcctttgtctgcgacaaggacgacgactgttcc
gacggctcggacgaggcctcctgccccaaacccacctgcagcggccgctccttccagtgc
aacaactccgtgtgtgttccagcccagtggcgctgcgacggcgacagcgactgcgccgac
ggctccgacgagtggccacaaaattgcgacgggcgccagaagaagccggccagtcgctgc
agccgccacgagttccagtgcgcggatggggagtgcatccacggcagctggaggtgcgat
ggaggcacggactgcaaggaccgctcggacgaagtcaattgcagtcgttccagatgtcct
ggggatcagttccagtgtttcgatggcacctgtatcgccggcaccctccagtgtgacggg
aaacacgactgctctgacctcagcgatgagctcggctgccacatagccagagcatgcgaa
ggccccgccatgtttaagtgtaacacaggggagtgtatcagcatggagaaagtgtgcaac
aaacagagagactgcgtggacaattctgatgagcctgatgaagaatgtgatcgtaatgag
tgccagaccaacaacggcggctgctcacattactgcagcgatctgaagcttggcttcaac
tgctcctgtcccgctggatacagcctgaagatggacaagaaaacctgtgaagacattgac
gaatgtgcggagccagacacctgcagtcaggtctgcatcaacctagtgggcagctacaag
tgtgactgcatgggggggtaccagattgaccctctgaccaagacctgcaaggctcagtca
ggtgttgtgccgatgctgtatttcacaaacaaacacgatgtgaggaggatgactttggac
cgcagcgagtacgtccgtctaatccctcagctgaaaaacgtggtggctctggacatcgac
atgcccaacaaaacaatcttctggtctgatctgtctctgaagaagatttacagctccaag
atagacacggctggaaactcctcacaccacaccgtagtcattgacagtggcatcggggct
cccgagggcctggcagtggactggatccatggcaacatctactggattgacagcgcttta
cagaccatctctgtggccacgacggacggcagcaggagaaagacgctgatcacggaaaac
ctggagaagccgcgagccattgtggtcgacccgatcaataactttatgttctggaccgac
tggggccagcaggcaaaaatagagaagtgtggcttgaacggaatggatcgcatcgccttg
gtgactgacaacattgtgtggcccaacggcatcaccctggacgtgagcaaccaccgtctg
tactgggtggactctaagctgcacacgttgtccagcatcgacgtgaacggagggacacga
cacagcgttctgttcagtgaggagcatctgtcgcatcccatctccctgaccgtgttccag
aatcaagtgttttggaccgacatggaccacagcgctgttatgagtgccaaccgcctcaca
ggaagagacatcagaacgttggcagtggagcttgaccagccggaggacatcattctctac
cacgacctcaaacagccaacgggcacaaactggtgcagccagggtaacggcctgaacggc
ggctgtgagttcctgtgcctccccgcccccctgatcaaccagcgatctgcaaagttcacc
tgcgcctgtccggacgacatgttcctgggctccggtatgagggagtgtgtgaagagtccc
gtcgctcctccggacgccagcacaacggaggcgccgctccaacccaacgctccgacgacc
aaggcgccctttgccaccactgctagaacccccccccaaactggccccacccgtcaggct
gctgccacggctcaaggaaacaaattggcagctgtgcccggagaagcgccgtcctcccac
ccggtcgctctctacgttgtgttgccaatgatggtcacggctctggtggtgtttggagcg
gtactggtgtggagacactggcggctgaggaacaccaacaccatccacttcgataatccc
gtgtaccagaagaccacagaggatgagctccacatctgcaggaacggctcggacggctac
atttatcccgagaggcagatgttgagcacggacgacatcgatgttgcttga
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