Takifugu rubripes (torafugu): 101072838
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Entry
101072838 CDS
T02386
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101072838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tru03019
]
101072838
03012 Translation factors [BR:
tru03012
]
101072838
Messenger RNA biogenesis [BR:
tru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
101072838
Translation factors [BR:
tru03012
]
Eukaryotic type
Release factors
101072838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
101072838
NCBI-ProteinID:
XP_011601962
Ensembl:
ENSTRUG00000012645
UniProt:
A0A674N0C7
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Position
5:complement(726890..738367)
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AA seq
576 aa
AA seq
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MDPRDTAPDSWEQEDDSEATLDGQLESAFTTLNVNAKPFVPNVNAAEFVPAFATKAHENL
DSAVAVEKISSTEASENVECALENGDTEMSTEEPWDQKEAEPDEEEPGGGDRGPEVQAAS
EELAPEMMEEEEESPVPKVPPTQPDAPRKEHINVVFIGHVDAGKSTIGGQIMYLTGMVDK
RTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHK
SFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTQEHAMLAKTAGVKHLVVLVNKMD
DSTVNWSLDRYEECKEKLVPFLKKVGFNPKKDIHFMPCSGMTGANLKDPTDICSWYSGLP
FIPYLDSLPNLNRSSDGPVRLPIVDKYKDMGIVILGKLESGSISKAQQLVMMPNRHVVEV
LSLLSDDVETDNAGPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRIFDAQIVIIEHK
SIICPGYNAVLHIHTCIEEVQIKALICLVDKKTGAKSPKRPRFVKQDQVCIARLRTAGTI
CLETFKEFPQMGRFTLRDEGKTIAIGKVLKLVDERD
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagacactgcccctgattcatgggaacaagaggacgattcggaggccaca
ctcgacggacagcttgaatcagcattcacaaccttaaatgtgaacgcgaaaccgtttgtg
cccaacgtgaacgccgctgaatttgttccggcatttgccacgaaagcacacgaaaatcta
gattctgctgttgcggttgaaaagatatcctccacagaggcatcagaaaatgtcgagtgt
gctctagagaacggggacacggagatgagcacagaggagccatgggaccagaaagaggct
gagccagatgaggaggagcctggaggtggtgacagggggccagaggtgcaagcagcatca
gaggagcttgctcctgagatgatggaggaggaggaagaatcgccagtgcccaaggttcca
cctacccaaccagacgccccaagaaaggaacacatcaatgttgtgtttatcggccacgta
gatgcaggcaaatccactatcgggggacagatcatgtatctaacaggcatggtagacaag
agaactttagagaaatatgaaagagaagccaaggaaaaaaatcgtgaaacctggtatttg
tcttgggccttagacaccaaccaagaggaaagagacaaagggaagaccgtggaggtaggc
cgggcctactttgagacagagaaaaagcactttaccatcctagacgccccaggccacaaa
agttttgtgcccaatatgatcggaggtgcatcacaagctgatttggctgttctggtcatc
tcagcacggaaaggtgaatttgagactggctttgaaaagggcggacagacacaggaacat
gccatgttggccaaaacagctggcgtcaagcacctggttgttctggtgaataaaatggat
gattctacagtcaactggagcctggatagatatgaagagtgtaaggagaaactagtgcca
tttttgaagaaagtgggttttaacccaaagaaggatattcattttatgccatgctctgga
atgactggagccaacctgaaggaccccactgacatttgctcctggtattcagggttaccc
ttcattccgtatttggacagtttgccaaatttaaacagatcaagtgacggccctgtcaga
ttgcccatcgtagataaatacaaggacatgggaatagtgattctgggcaaattagaatca
ggctccatcagtaaagcacagcagctggtcatgatgccaaacagacatgttgtggaggtg
ttaagtcttctgtcagatgacgtggagacagacaacgccggacctggggagaacctgaaa
cttcgtttgaagggcattgaggaggaggaaatcctacctggttttatcctgtgtaatgct
gagaacctctgccactcagggcgcatctttgatgcccagatagtcatcattgaacacaaa
tccatcatctgtccaggttacaatgcagtccttcacattcacacctgcattgaagaagtg
caaattaaggccttaatctgtctggtagacaaaaagacgggagcaaagagtccgaagaga
ccccgatttgtgaaacaggaccaggtctgcattgcccgtctgcgcaccgcgggaaccatt
tgcctcgagacctttaaagaatttcctcagatgggacgatttactttgcgagatgagggt
aagaccatcgccatcggtaaggtgctgaagctggttgatgagcgggactga
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