KEGG   Takifugu rubripes (torafugu): 101079628
Entry
101079628         CDS       T02386                                 
Name
(RefSeq) collagen alpha-2(VI) chain
  KO
K06238  collagen type VI alpha
Organism
tru  Takifugu rubripes (torafugu)
Pathway
tru04510  Focal adhesion
tru04512  ECM-receptor interaction
tru04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:tru00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    101079628
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    101079628
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    101079628
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tru04147]
    101079628
   00536 Glycosaminoglycan binding proteins [BR:tru00536]
    101079628
Exosome [BR:tru04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   101079628
Glycosaminoglycan binding proteins [BR:tru00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   101079628
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   101079628
SSDB
Motif
Pfam: VWA Collagen VWA_2 VWA_3
Other DBs
NCBI-GeneID: 101079628
NCBI-ProteinID: XP_011615557
Ensembl: ENSTRUG00000004264
LinkDB
Position
22:complement(13056512..13066950)
AA seq 1012 aa
MLGLEVFAFCLLFGALAHSQTTECVMKNECPIDVYFTIDTSETIALQEPPPGSLVESIKE
FTRQFVMRLENAEYRGAVRINWNIGGLHFSQQQRVFSRIGSKTDFMNGVSGIQYLGKGTY
TDCALMNMTQEMLRSPSDPKALRFAVVITDGHVTGNPCGGIKVSAERARDEGIHIFAVAA
SKNIDEMGMREIANSPGMVFRRDFMAVDLSEGKPIIHTKTIDRIIKTMKHLAYVECHSVS
CLETPGPSGPKGHRGQKGAKGDSGEPGPKGEIGRPGDPGIEGPIGQPGTKGEPGLKGDKG
EIGFQGKKGADGVPGRNGTDGQKGKIGRIGAPGCKGDPGDRGPDGHPGDVGELGPSGADG
EKGDAGRPGRPGPPGGEGDTGPKGEMGSPGSPGYPGEKGNAGSPGNPGATGEAGRRGDYG
PKGAQGPGGTRGEKGEMGSEGLRGLAGESGKKGAKGDNGLPGPRGSPGAPGESGRNGTRG
DAGDVGQRGEPGPPGPKGDPGRPGFNYPGSRGPTGERGEKGNHGPRGSRGDCGQKGEPGN
KGTPGEPGEPGHRGEPGQRGPRGEGGRNGDPGPEGDPGLTECDVMNYIRETCGCCDCEKR
CGALDIVFVIDSSESVGLTNFTLEKNFVINTINRLGSLTKDPKSETGTRVGVVQYSHSGT
FQAIRPDDPKIDSLTSFKEAMKQMEWIAGGTWTPSALKYAYDNLIRDSRRAQAKVTVVVI
TDGRFDPRDDDSLLTYLCSDPNVDVNAIGIGDMFSQIEENEILKSIACQRDGKVLGMRRF
ADLVAEEFIDRIETVLCPDPVVVCPDLPCKSEPAVASCVRRPVDMVFLLDGSERMGLENH
RRAKEFIENVARRLNLANSNSDERDARIALLQYGSPTEQRVEFPLTYNFTVISDSLANVD
YMDSSSALGSAIIHAVNNIVIPRQGDRLARRHAELAFIYITDGITSREQLDEGVTAMRRV
EGVPTVIAIGKDTDEEVLRKVALGDTTAIFRADNYNMLNKSSFFERFIRWIC
NT seq 3039 nt   +upstreamnt  +downstreamnt
atgctggggttggaggtttttgcgttctgccttctttttggagccctggctcacagccag
acaacagagtgtgtcatgaagaatgaatgtcccatagatgtatacttcactatagacacg
tctgagaccatcgccctgcaggagccgccgcctggatccctggtggagagcatcaaggag
ttcaccagacagtttgtgatgcgtttggaaaatgcggagtacagaggtgctgtgcggatc
aactggaacatcggaggactgcacttctcccaacagcaaagagtgtttagccgtattgga
tccaagactgatttcatgaatggcgtcagtggaatccaatacctgggcaagggcacctac
accgactgcgccctcatgaacatgacccaggaaatgttgcgctcaccctctgaccccaag
gccctccgcttcgctgtggtcatcacagacggccatgtgaccgggaacccatgtgggggc
atcaaagtgtcagcagagagggcgcgggatgagggtatccatatatttgccgtggcggca
tccaagaacattgatgagatgggaatgagggagatcgccaactccccggggatggtcttc
aggagggacttcatggcggtggacttgagcgagggcaaacccatcatacacacaaagacc
attgaccgcatcatcaagacgatgaaacatttggcgtacgtagagtgtcacagtgtgtcc
tgtctggagacaccaggaccatctggtccaaaaggccacagaggtcaaaagggcgctaaa
ggagacagtggtgaaccaggccctaaaggagaaataggtcgtccaggagaccctggtatt
gagggtcccattggtcagcccggtaccaaaggagaaccaggtttaaaaggagacaaggga
gagataggattccaaggtaaaaagggagctgatggtgtcccgggacgcaacggaacagat
ggacagaagggtaaaattggtcggatcggagctcctggctgcaaaggagatccaggcgac
agaggtcctgatggtcatcccggcgatgttggtgaacttggcccttctggagctgatgga
gagaagggtgatgctggacgtcctggaagacctggtccccctggtggagaaggagacaca
gggccaaagggagagatgggtagtcctgggtcgcctggctatcctggagaaaaaggaaat
gctggaagccctggaaatccaggagccacaggagaggcagggagaagaggagactatggg
ccgaagggtgctcaagggccaggcggaaccagaggagaaaagggtgaaatgggttcggag
ggtttaagaggtcttgcaggtgaatctggaaagaaaggagcaaagggagacaacggtctt
ccaggacccagaggatcacctggggcacccggagaatctggaagaaatggcactaggggt
gatgcaggtgatgtgggacaaagaggagaacccggaccacctggaccaaagggagatcct
ggaagacctggctttaactatcctggatcaagaggaccaacgggtgagagaggagaaaag
ggcaaccatggacctcgtggcagcagaggagactgtggtcaaaagggtgagccaggcaat
aaaggaactcctggggagcctggtgagccgggacatcggggtgaacctggccaaagagga
ccaagaggagagggtggacggaatggagatcctggacctgagggagatcctggccttacc
gaatgtgatgttatgaactacatcagggaaacctgtggctgctgtgattgcgagaaacgt
tgtggagctctggacatcgtgtttgtgattgacagctcagagtcagtgggtctgactaac
ttcaccctggagaagaactttgtcatcaataccatcaacagactgggctccctcaccaaa
gaccccaagtcagaaacaggcacgagagtgggtgtggttcagtacagtcacagtggaact
ttccaggccatccgtcccgatgatcccaagattgattcactgacttctttcaaggaagcc
atgaagcaaatggaatggatcgccggtggaacgtggactccatccgccctgaagtacgcc
tacgacaacctgatcagggacagccgccgagcccaagccaaagtcactgtggtggtcatc
acagacggacgctttgaccccagagatgatgattctttgctcacctacctgtgcagtgat
cccaatgttgacgtgaacgccatcggcatcggggacatgttttctcagatcgaggagaat
gagattctgaagagcatcgcctgccagagggatggcaaggtgttgggcatgaggcgcttt
gcggacctggtggccgaggagttcattgacaggatagaaactgttctctgcccagatcct
gtcgttgtatgtcctgatctcccttgtaaatcagagccggctgtggccagctgtgtgcga
cggccggtggacatggtcttcctgttggacggctctgagagaatgggattggagaaccac
cgcagggccaaagagttcatcgagaacgtggcccgccgcctcaacctggccaacagcaac
tcagacgagagggacgctcgcattgctttgctgcagtatggcagccctacagaacagagg
gtggagttcccgctcacttacaacttcactgtcatcagtgattcgctggccaatgtggac
tacatggattcctcttccgctctgggcagcgctatcatccatgcagtcaacaatattgtg
atcccaaggcaaggagaccgactggctcgtcgccatgccgagttggccttcatctacatc
accgacggaatcacatccagggagcagctggatgagggggtaactgccatgcgacgagtg
gaaggcgttcccactgtgatcgccataggaaaagacacagacgaagaggttctgcggaag
gtggcccttggggacacaaccgccatcttcagggcagataactacaacatgctgaacaaa
tcctcattcttcgagcgctttatccgctggatatgctag

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