KEGG   Takifugu rubripes (torafugu): 101079879Help
Entry
101079879         CDS       T02386                                 

Gene name
hdac6
Definition
(RefSeq) histone deacetylase 6
  KO
K11407  histone deacetylase 6 [EC:3.5.1.98]
Organism
tru  Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:tru00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tru01009]
    101079879 (hdac6)
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tru03019]
    101079879 (hdac6)
   04131 Membrane trafficking [BR:tru04131]
    101079879 (hdac6)
   03036 Chromosome and associated proteins [BR:tru03036]
    101079879 (hdac6)
Enzymes [BR:tru01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     101079879 (hdac6)
Protein phosphatases and associated proteins [BR:tru01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     101079879 (hdac6)
Messenger RNA biogenesis [BR:tru03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     101079879 (hdac6)
Membrane trafficking [BR:tru04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    101079879 (hdac6)
Chromosome and associated proteins [BR:tru03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     101079879 (hdac6)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl zf-UBP zf-UBP_var Bclx_interact
Motif
Other DBs
NCBI-GeneID: 101079879
NCBI-ProteinID: XP_011619431
LinkDB All DBs
Position
3
AA seq 1110 aa AA seqDB search
MDSGDPPDSGPKPIRRSPRLLPQCSNVSVKGRKGESSLQEVKRRGRMERSREEEEDLDDS
LKMLNLSSGPSASGTGLVFSEIFTHHENLWDSSHPERPERVASIMEHLEQQDLLSRVTRV
QVCDRPCSDWSPVCVSAQRSYRKELLLCHSQHYVDLMKSTQTMTEEELHSLSDKYDSIYL
HPESFSVAVMAVGSVLQLVDQVMTSELRNGFAVVRPPGHHAQKDLPNGFSIFNNVAIAAR
YAQTRHSVSRVLIVDWDVHHGQGIQYLFQEDPSVLYFSVHRFEQGSFWPHLPESDSHFVG
SSGAEGSNINLPWNKTGMKDADYIAAFQQLLLPVAHEFQPQLVLVCAGFDAAAGDEKGQM
CVRPQCFHILTHMLMSLAEGRLVLALEGGYNLQSTAEGTAACVRALLGGACPPLATPTAP
SDSALRSISQTLSALFPYWPSLQILEGGPWSTDGVLRTTSAEHTAELSSHAPSVATATGL
VYDERMMEHLNLWDRHHPEQPQRISKIFSQHQELGLVDRCRSIPARLATEEELCMCHSVQ
HVHQMRATATMKPRELHKLGDEFNSIYINNQSFQAALLAAGGCFSGVEQILAGQVRNGVA
IVRPPGHHAERDFPCGFCFFNTAALAARHAQKLSQDAPLHVLILDWDVHHGNGTQHMFED
DDSVLYISLHRYDNGAFFPSSEDAAPDRVGVAKGVGYNVNVAWSRGRMGDSDYLAAFHHV
VMPVATEFNPDLVLVSAGFDAARGDPLGGYHVTPEGYAHLTHQLMSLAGGRLLLILEGGY
NLSSISKSMAMCTSVLLGDPPPALLTPLPPPHHSAVATINEVIRCHAPYWRSLRIHIPES
VRASLPSPKDHGKRSSRGKGRKSEETRRDKPPMSPPRQRGTLVDQSLEALTRGLASLDIT
QTAASPSPATSTPVGGARPKVHRSPQMLTCDQEVKVESREQSCSAPRSQPEAQAAVQLAA
TGSGSAGGAGPGPEAKGACGGSASQHSMELTRGGQINALYVVDPLPWCPHLDAVKPLPPS
GVDIFKPCQDCGSEVENWICLTCYQVFCGRYVNEHMVTHGVVAEHPVVLSFSDLSVWCYL
CEAYIHNQILFEAKNSAHWAKFGEEMPSWS
NT seq 3333 nt NT seq  +upstreamnt  +downstreamnt
atggattcaggagaccctccagattctggaccaaagccaatcagaaggtccccccgtctg
ctacctcagtgcagcaacgtaagtgtgaagggacgcaagggagaaagcagcctacaggag
gtgaagaggagaggaagaatggagcggagcagagaggaagaggaagacttggacgacagc
ctgaagatgctgaatctgtccagtgggccatcagccagtggaacgggtctggtgttctcg
gagatcttcactcaccatgagaacctctgggattccagtcatccggagagacccgagaga
gtggcgtccatcatggagcacctggagcaacaggacctgctgtcacgggtcaccagggtg
caggtctgtgacagaccctgttctgattggtcacctgtgtgtgtttcagcccagagaagc
tacagaaaagagctgctactctgccacagccaacattatgtggatttgatgaagtcgact
cagaccatgacggaggaggagctgcacagcctgtcggacaaatacgactcaatctacctt
catccggagtctttctccgtggccgtgatggcagtgggttcggtgctgcagctggttgac
caggtcatgacctccgaactcaggaatgggttcgctgtggtcagacctcctggccatcac
gctcagaaggaccttccaaacggtttctcgatcttcaataatgtggcgatcgcagctcga
tacgctcagaccagacactcagtgagcagggtgttgatagtggactgggatgttcatcac
ggacagggcatccagtacctgttccaggaggaccccagtgtgctgtacttcagtgtgcac
aggttcgagcagggctccttctggccccaccttccagagtccgacagccattttgttgga
tcttcaggagctgaaggcagcaacatcaacctgccctggaacaagacggggatgaaggat
gctgattacatcgcagcgttccagcaactgctgctgccagtcgctcacgaatttcagcct
cagctggttttggtctgtgctggatttgatgcagcagctggagatgagaaggggcagatg
tgtgtgcggcctcagtgtttccacatcctcactcacatgttgatgagtttggccgaaggt
cgacttgttctggctctcgagggaggatataaccttcagtcaacagcagagggcactgca
gcgtgtgttcgagctctgctgggaggagcctgtcctcctctggccacgcccacagcccct
tctgacagtgctttgcggtccatctctcagactctctcagccctgttcccatattggcct
tctctgcagatactggaaggtggcccctggtccacagacggtgtcctgagaacaacaagt
gctgaacacacagcagagctcagtagccacgcaccctctgttgccacagcaacaggcctg
gtttatgatgagcgcatgatggagcacctgaacctgtgggacagacatcaccccgaacaa
ccacagaggatctctaagatcttctcccaacatcaggagctgggactggtggaccggtgc
cgatccatcccagcgcgcttagcaacggaggaggagctgtgcatgtgtcacagtgtgcag
cacgtccaccagatgcgtgccacagccaccatgaagcccagagagctgcacaaactggga
gacgagttcaactccatatacatcaacaaccagagcttccaggctgctctgctggctgct
ggaggctgcttcagcggcgtggagcagatcctggcgggacaggtgaggaacggcgtggcc
attgttcggccgccaggtcaccacgcagagagagattttccctgtggcttctgtttcttc
aacacggcggctctcgctgctcgccacgcccagaaactgtcccaggatgcaccgctgcac
gtccttattctagactgggatgttcaccacggcaacgggacgcagcacatgtttgaggac
gacgacagtgtcctgtacatctctcttcatcgctacgacaacggggctttctttccatct
tccgaggatgccgcccctgaccgagtgggcgtggccaagggggtggggtataatgtcaac
gtggcgtggagcagaggacggatgggtgactctgactacctcgctgccttccaccatgtg
gtcatgcctgtggccaccgagtttaaccccgacctggttcttgtgtctgctggctttgac
gcagctcgtggggacccactgggggggtatcatgtgactccggagggttacgcacacctg
acccaccagctgatgtcactggctggggggcggctcctgctcatcctggagggaggttat
aatttatcatccatctctaaatccatggcaatgtgcaccagcgtgttgctgggtgaccct
cctccggctttgctcacacccctcccacccccccatcacagcgccgtggcaacaatcaat
gaggtcatccgatgccacgccccctactggcggtcactgaggatccacatcccagagtcc
gtgcgggcctccctgccgtctccaaaggatcatgggaaacgtagttccagaggaaaaggc
agaaagtcagaggagaccagaagggacaaacctccaatgtccccaccaagacagcggggc
actttggtggaccaaagtctggaggcactgacgcggggacttgccagcttggacatcact
cagaccgcagccagtccctctccagctacgtccaccccagtaggaggggccaggccgaag
gtccaccgtagcccacagatgctcacctgtgatcaggaggtgaaggtggagtcacgggag
cagagctgctcagcaccgaggtcccagccagaggctcaggctgcagtccagctggctgcc
actggaagtgggtctgctggtggagctgggccgggtccagaggcaaagggcgcctgtggc
gggtcggcctcgcagcactctatggagctcacgcgtggaggacaaatcaatgcgctgtat
gtagtggaccctctgccctggtgtccccacctggatgccgtaaagccgcttcctccctct
ggtgttgatatctttaaaccctgtcaggactgtggttctgaagtcgagaactggatctgc
ctcacctgctaccaggtcttctgtggccgctacgtgaacgagcacatggtgactcacggc
gtggtggcggaacaccctgtggtgctgagcttttcggacctgtcggtgtggtgctacctg
tgcgaggcctacattcacaaccagattctatttgaagcaaaaaacagtgctcactgggcc
aagtttggagaggagatgccttcctggagctaa

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