Takifugu rubripes (torafugu): 445960
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Entry
445960 CDS
T02386
Symbol
smc3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04110
Cell cycle
tru04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
445960 (smc3)
04114 Oocyte meiosis
445960 (smc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tru03036
]
445960 (smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tru00535
]
445960 (smc3)
Chromosome and associated proteins [BR:
tru03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
445960 (smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
445960 (smc3)
Proteoglycans [BR:
tru00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
445960 (smc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
AAA_29
OmpH
MFD_D3
Lysis_col
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
445960
NCBI-ProteinID:
NP_001027798
Ensembl:
ENSTRUG00000006942
UniProt:
Q802S0
LinkDB
All DBs
Position
17:complement(3261291..3272946)
Genome browser
AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTVVDPFSPKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSSKRETCGDKSRQLRDAQQDARDKVEETERVVRELKSKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELQETEPKFSMVKEKEER
GISRLAQATQERTDLYAKQGRGSQFTSKEDRDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTETNKEKNLEQYTKLDQDLNEVKTRVEELDKKYYEVKNRKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVISGYHGIVMNNF
ECDPAFYTCVEVTAGTRLFYHIVETDEVSTKILMEFNKMNLPGEVTFLPLTKLDVRDTAY
PETNDAIPMISKLRYNTNFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDMRKAEEELGELEAKLNENLRRNIEHINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELDGINKRVKDTLARSDDLDTLIDKTEGEIKEHIRS
MDRWKNIEKEQNDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
TLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDAEGSQSQDEGESGVDSERG
SSSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIVELAGHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEQAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcaaacaggtaatcatccaggggttccgaagttacagggaccaaacggtggta
gacccctttagtccgaaacacaacgtcatagttgggagaaatggttctggaaaaagtaac
ttcttctatgccatccagtttgtcctcagtgatgagttcagccacttgcgacccgagcag
cggttggccctgctccatgaaggaacgggcccccgtgtcatttcagcttttgtggaaatt
atatttgacaactctgacaaccgtttgccgattgacaaagaagaagtctcacttcgccgc
gtcattggcgcaaagaaggaccaatacttcttagacaaaaagatggtgacgaaaaatgat
gtcatgaatctcctggagagcgctggcttttcacgcagtaacccctactacattgttaaa
cagggcaagatcaaccaaatggccacagcacctgactcccaacgtctgaaactactgagg
gaggtggcgggaacccgggtttatgatgaacggaaggaagagagtatttctctcatgaaa
gaaacagagggaaagcgagagaagattaatgagctgttaaagtacattgaagagcgtttg
cacactttggaggatgaaaaggaggagttggctcaatatcagaagtgggataagatgaga
agagctctagaatacaccatctacaaccaggagttgaatgaaacccgtgccaaactggac
gagttgtccagcaaaagagaaacctgtggagacaaatccagacaattgcgcgatgctcag
caagatgccagagacaaagtggaggaaacggagcgcgttgtccgagaactgaagtccaag
atctctgctatgaaggaggagaaagagcagctatcggctgagcgccaggagcagatcaaa
cagaggaccaagctggagttgaaggccaaggacctgcaggatgagctggcaggcaacagt
gaacagaggaaacgtttgctgaaagaacggcagaaactgctggagaaaattgaggaaaag
caaaaagagcttcaagagacggaacccaaattcagcatggtcaaagaaaaggaagagcgt
ggaatctccagactggctcaagctacgcaggagaggaccgacttgtatgctaagcagggc
cgtggcagtcagtttacctctaaagaggacagggacaagtggatcaaaaaggagctgaag
tcactggaccaggccatcaatgacaaaaagaggcagattgcagccatccacaaagacctg
gaggacactgagaccaacaaggagaagaacctggagcagtacactaaactcgatcaagat
ctaaacgaggtcaagactcgtgttgaagaactggacaaaaagtattacgaggtgaaaaac
aggaaagatgagctccagagtgaaagaaactacctgtggcgagaagagaacgcagagcag
caggccctggcagctaagagagaggacctggagaagaaacagcagctccttcgagccgca
accggcaaggcgattctgaatggcattgatagcatcaacaaagtccttgagcattttcgc
cggaagggcatcaaccagcatgtcatcagtggttaccatggcattgtcatgaataatttt
gagtgcgatcctgctttttacacttgcgtggaggtgacagctggtaccagactgttctac
cacattgtggaaacagatgaagtcagtactaaaatacttatggagttcaacaagatgaac
ctgcctggagaagttacattcctgcctctgaccaagctggacgtcagagacactgcctat
cctgaaaccaatgatgccattcccatgatcagcaagttgcgctacaacaccaattttgac
aaggccttcaagcacgtgtttggaaagaccctgatttgccgtagcatggaggtttctact
cagctggccagagctttcaccatggattgtataactcttgagggtgaccaggtaagccac
cgcggagctctaaccggaggttactacgataccagaaagtcacgtttggagctgcagaaa
gacatgaggaaggcagaagaggagctgggtgagctggaggccaaactcaatgaaaacctt
cgaagaaacattgaacatatcaacaatgagatcgaccaactcatgaaccagatgcagcaa
attgagacccagcagaggaagttcaaggcctccagagacagtattctctcagagatgaag
atgctgaaggagaagaggcagcagtccgagaagacgttcatgccaaaacaacgtagtctc
cagagtttagaggccagcctccacgccatggagtccaccagggaatcgctgaaggctgag
ctgggcacagacctgctctcccagctcagcctggaggaccagcgccgcgtcgacgacctc
aacgacgagatccgccagctgcagcaggacaacaggcagttgctgaacgaaaggatcaag
ctggaagggatcatgacccgagtggaaacgtatcttaatgagaacttgcggaagcgtctg
gaccaggtggagcaggagctgaacgagctgcgagagacggaggggggaacggttctgaca
gccacaacatctgagctggacggcatcaacaagcgtgtcaaagacaccttggctcgatca
gacgatctggatactctgattgacaagacggagggggagatcaaggagcacataaggagc
atggaccggtggaagaacatcgagaaggagcagaacgatgccatcaaccacgacaccaag
gagctggagaagatgaccaacaggcagggtatgctgctgaagaagaaagaggagtgcatg
aagaagatcagggagctgggctcactacctcaggaggcctttgagaagtaccagaccctc
acgctgaaacagctgttcaggaagttggagcagtgcaacacggagctgaagaagtacagt
cacgtcaacaagaaagctctggaccagttcgtcaacttctcggagcagaaggaaaagctg
atcaagcggcaggaggagctggaccgcggatacaagtccatcatggagctcatgaatgtc
ctggagctccgcaagtatgaggccatccagctcaccttcaaacaggtgtcaaagaacttc
agtgaggttttccagaaactggtgccggggggcaaagccaccctggtgatgaagaagggc
gacgccgagggcagccagtcccaggatgaaggcgagagcggcgtggacagcgagaggggg
tccagctcgcagagcagcgttcccagcgtcgaccagttcacgggagtcggtatcagggtg
tccttcacagggaagcagggggagatgagggagatgcagcagctgtctggaggtcagaag
tccctggtggcgctggcgctgatattcgccatccagaaatgtgacccggctcccttttac
ctgtttgatgagatcgaccaggccctggacgcccagcaccggaaggccgtctcagacatg
atcgtggagctggcgggccacgcccagttcatcaccaccaccttcaggcccgagctgctg
gagtccgccgacaagttctacggcgtcaaattcagaaacaaggtgagtcacatcgatgtg
atcacagcagagcaagccaaagactttgtggaggacgacaccacccacggttaa
DBGET
integrated database retrieval system
