Thermus scotoductus: TSC_c07930
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Entry
TSC_c07930 CDS
T01414
Symbol
sbcC
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tsc
Thermus scotoductus
Brite
KEGG Orthology (KO) [BR:
tsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsc03400
]
TSC_c07930 (sbcC)
DNA repair and recombination proteins [BR:
tsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TSC_c07930 (sbcC)
Archaeal homologous recombinant proteins
TSC_c07930 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
Fez1
AAA_28
PhageMin_Tail
T2SSE
ABC_ATPase
AAA
AAA_15
AAA_25
AAA_18
HALZ
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADW21419
UniProt:
E8PNE4
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All DBs
Position
736273..739203
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AA seq
976 aa
AA seq
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MRPLRLELEGFGPYRERQGVDFSDVELFAITGPTGSGKSTLLDAMAFALYGVVPRVGRNV
GSLVHPGASEARVRLTFQVGGRVYRVERVRGKRSEGRLFELGPVGERLLPLETLDALNRA
LEELLGLTYEAFTRALLLPQGEFDRFLKGEAKDRRRILLDLFELTRLERVREKAASRKAA
LMEEKGRLEGELAGLLGVSLEAKENLERALADLTREIARLQNEKRRLEEGVLELKGLQAL
LLRKGELEGRLGRLRAEASRMAEVEERLKKALEAEAALPLWQDLRRKEEALAATAQELQR
VRARLAQLEGDRRALAFDPEALKEAQRALLQAEGLRALEALWRRVGVKEHLAPRLGLAPE
AYAGALESLLQEEALLADRERELSRLVEEQGRLREKEEALNRVREALKALVEEGGQTRAQ
VEALEKALRGAEAHRLRQELEELRRRREFLEEEKKRLEAELAQLAKEERRLGLLAYRDLL
QPGEPCPLCGGVVHHLPPLVEGPGASDLRKRREVGEKALRELLTRLGAVAEEERAKREAL
ETLGVEPIPGDPKELEGKLQEAQVRLQELREKYREKQGEARALEEEVKRLSQEKERLRQG
FSRLEEAEVAWEETREALASLRWEKEALAAGLYRLLWERTGGRPVPEYIGALSRRVEELE
KKEKQDRDLARAWEEASRTLAGLLAQEEEQRKALEEVKGRVVGLMPEEEAKALYLPPKER
EALAERIRAHREELAQVEALLEEVEREARARFPGSLPPLAEVEARLRREEERLSEIQGSL
EARMGERAVLEERLKEVGEKLHRRRELEARLAEVVREMGLWEKLAFDLQQNNFPAYLLGL
RQRNLVERADELMATLSAGRYRLRSKEDEYQVLDLWTEAVRPVRTLSGGESFLASLSLAL
ALSEELSRGRLGALFLDEGFGTLDPETLEVVAGVLEALPTRGRLVGIVTHVETLAERLPA
RLVVRKHPSGSRVEWA
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
ttgaggcccttgcgcctggagcttgaggggtttggtccctatcgggagcggcagggggtg
gacttctccgatgtggagcttttcgccatcaccgggcccacggggagcgggaagagcacc
ctcctggacgccatggcctttgccctctatggggtggtgccccgggtagggcggaacgtg
gggagcctggtccacccgggtgccagcgaggcccgggtccgcctcaccttccaggtgggg
ggaagggtctacagggtggagcgggtgcgggggaagcggagtgaagggcggctcttcgag
ctgggtccggtgggggagcggcttttacccttggagaccctggacgccttgaaccgggcc
ttggaggagcttttgggcctcacctacgaggcctttacccgggccctcctccttccccag
ggggagttcgaccgcttccttaagggagaggccaaggacaggcgcaggattctcctggat
ctctttgagcttacccggctggaaagggtcagggaaaaggcggcttcccgcaaggcggcc
ctgatggaggagaagggccggctggagggggaacttgcggggcttcttggggtgagcctc
gaggccaaggagaacttggaaagggctctggcggacctaacccgggagatcgcccgcctt
cagaacgagaaaaggcgcctggaggagggggttttggagctcaaaggccttcaggcgctt
ctccttcgcaaaggggagctggaaggccgcctgggccgcctcagggccgaggcttcccgc
atggcggaggtggaggaaaggctcaagaaggcattggaggcggaggccgccctgcctttg
tggcaggacttgagaaggaaggaggaggccctggcggccacagcgcaggagctccaaagg
gtgcgcgcccggcttgcccagctggaaggggaccgccgggccctggcctttgaccccgag
gccctaaaggaggcgcaaagggctcttctgcaggcggaggggctaagggccctcgaggcc
ctttggcggcgggtgggagtgaaggagcacctggctcccaggctgggcctggctcccgag
gcctacgcgggggccttggaatccctcctccaggaggaagcccttttggcggacagggag
cgggagttatcccgcctggtggaagagcaagggcggctaagggagaaggaagaagccctg
aaccgggttagggaggccctgaaggccttggtggaggagggagggcagacccgagcccag
gtggaggctctggagaaggctcttaggggtgcggaagcccaccggcttcggcaggagctg
gaggagctaaggaggaggcgggagtttttggaggaggaaaaaaagcgcctcgaggcggag
cttgcccagctggccaaggaggaaaggcgcctggggcttctcgcctaccgcgatcttttg
caaccgggggagccctgccccttgtgcggcggtgtggttcaccacctgccccctctagtg
gaggggcccggggcttctgacctcagaaaaaggcgggaggtgggggagaaggccttacgg
gagctcctgacccggcttggggccgtggcggaggaggaaagggccaagcgggaggccctg
gaaaccctgggcgtggagcccatccccggggaccccaaggagctggaggggaagctgcag
gaagcgcaggtgaggcttcaggagctaagggaaaagtaccgggaaaaacagggggaggcc
cgggccctcgaggaggaggtgaagcggctatcccaggagaaggagcgtttgcgccagggg
ttttctcgcctggaggaggcggaagtcgcctgggaagagacccgggaagccttggcctcc
ctgcgctgggagaaggaggccctggcggccgggctttaccgcctgctttgggagaggacg
gggggcaggccggtgccggagtacatcggggccctttcccggagggtggaggagctggag
aaaaaggaaaaacaggaccgcgatctcgcccgggcctgggaggaagcctcccggaccctg
gcggggcttttggcccaggaggaggagcagcgaaaggccctcgaggaggtcaagggccgg
gtggtgggcctgatgcccgaggaggaggccaaggccctttaccttccccccaaggagcgg
gaggccctggcggagaggatccgggcccaccgggaggagcttgcccaggtggaagccctc
ctggaggaggtggagcgggaggccagggctcgcttccccggttcccttccccctttggcg
gaggtggaggcccgcttgcggcgggaagaggaaaggctttctgagatacaggggagcctc
gaggccaggatgggagaaagggccgttttggaggagcggcttaaggaggtgggggaaaaa
ctccaccgccgccgggagctggaagctcgcctggcagaggtggtgcgggagatgggcctc
tgggagaagctggcctttgacctccagcagaacaacttccccgcctacctcctgggcctc
aggcagaggaacctagtggagcgggcggatgagctcatggctaccctttctgccgggcgt
taccgcctgcgctccaaggaggatgagtaccaggtcctggacctctggaccgaggcggtg
cgcccggtgaggaccctttccgggggggaaagcttcctggcaagcctctccttagccctg
gccctctccgaggagctttctcgggggcggcttggggctttgtttttggacgagggcttc
ggtaccctggacccggaaaccctggaggtggtggcgggggtgctggaggcgcttcccacc
cgggggcggctggtgggcatcgtcacccacgtggagaccctggcggaaaggcttcccgcc
aggctcgtggtgcgcaagcatccctcggggagccgggtggagtgggcttag
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