Turicibacter sanguinis: HLK68_14405
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Entry
HLK68_14405 CDS
T06584
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
tsg
Turicibacter sanguinis
Brite
KEGG Orthology (KO) [BR:
tsg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsg03400
]
HLK68_14405 (addA)
Enzymes [BR:
tsg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HLK68_14405 (addA)
DNA repair and recombination proteins [BR:
tsg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HLK68_14405 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QJS20392
LinkDB
All DBs
Position
complement(2974810..2978406)
Genome browser
AA seq
1198 aa
AA seq
DB search
MNQVPIKPLEATWNDEQWEAIYRKGEDLLISAGAGSGKTAVLVERMIQKIIQEKLNIDEL
LVMTFTEAAAAEMKQRMRSRIQDELEKQPDNEHLKVQLNKISQSHISTFHAFCNKLIKRY
YYLLELDPVFKIADDIEVGIIQDEVVESLFDDLSDDEDESYLLLSRQFNNDRNDENLKVM
LLKIYELARSNPEMIQWLENLPHLYQWDEQDLMSWIHYDKILKVITPSLNEAVLDLEKAK
EYATYSQMTEKLHKYATDVYFQDLEYVNRLKDAMNSSYEALREAFMNTTLSRFPSAPKKD
FDEEMNTICKEARDSFKKRIEKIKEKYLTYSNETHLIHFKKSQEVVEALAKMVLLFHERF
SEAKLKRQLLDFSDLEWYTLRLLIQDGQATAVAFDIHAQFKEIMIDEYQDTNFMQESIVQ
AIAKIKSPEIPIFMVGDVKQSIYRFRLAEPSIFQGKYTMFSDGNGKGHKIDLMKNYRSHQ
QVIDSTNYIFKQLMDEPVGEINYDEAAMLRLGVLGEVNDPFNQNEVHLIDKLQVTDDETD
LSTVELEAHHIARTIKRWMDSKQEVYDRKLGRMRLLTYQDIVILMRSLSSVTTFQDVFRQ
YHIPLFTEQNTDLFDSIEIINMVSCLKVIDNPYQDIPLVGLMRSPLFFFNERELSLIKVS
SKASSFYELVQFYQNHGEDEFLKQKTKRFVEILERWRFEAKTQSLASLITLIYEQTLYYE
FVMGLPHGYLRKANLDVFVDKARHYESSTKKGLYGFVNYIDRMQALGKHFGKAKTVTANE
DVVRIMSIHKSKGLEFPVVFISQIQKKFNVQDEKGNYILHKKYGVAVKYIDSQLSFTQKT
IAQNVVASLIHREMLAEEMRLLYVAMTRAKSKLLFTGVFEVEKKLASLKEVITESGVRLP
DSYRLKAVNYADWILPAILKHPDNQEIVATYLGVTPTCLEDASSWKIEIFSQQQELEQSM
KVEESLAKQPPVIDFEKIFSTRYEHQELVEINAKQSVSQRKLAEETPMFKGIPELRPQVA
YDRPSFMREKKISGAEAGTALHQFMQHLPVMKNHTLESLQQVKERVIEKEMMTEEMSSRI
DLGQVLEFTKSPLYEKIITALSVKKEVPFMTLVKVDEHEQSQILLQGVIDLLAEFEDEVY
IVDYKTDYIRDFEVQQQELKQRYETQMKYYSKAIKEIFPTKKVSCHVYFLKVSQCLVY
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagtacccattaaaccgctggaggcgacttggaatgatgaacaatgggaagct
atttatcgaaaaggcgaagatttattaatttcagctggggcaggttcaggaaaaacggct
gtactcgtggaacgaatgattcaaaaaattattcaagagaaactaaatattgatgaatta
cttgtcatgacctttacagaggcagcagctgctgaaatgaaacaacgtatgcgttcacgc
attcaagatgagttagaaaagcaaccagataatgaacatttaaaggtccaattaaataaa
atttctcagtctcatatttcaacgtttcatgccttttgtaataagttaattaaacgttac
tattatttattagaactcgatcctgtgtttaagattgccgatgatattgaagtcgggatt
attcaagatgaggtggttgaatcgttatttgatgacttatcagatgatgaggatgagtct
tatttgctgttgagtcgtcagtttaataatgatcgcaatgatgagaatttaaaagtcatg
ttacttaaaatttacgaattggcacgttctaatcctgaaatgattcagtggttagagaat
ttacctcacctatatcagtgggatgagcaagatctaatgtcatggattcattatgataaa
attttaaaagtcataactccaagtcttaatgaagcagtattagatttagaaaaagcaaaa
gaatatgcgacttactcacaaatgacggagaaattacataaatacgcaacagatgtatat
tttcaagatttagagtatgtcaatcgtttaaaggatgccatgaactcatcatatgaagcg
ctacgcgaggcttttatgaatacaacgctttcgagatttccttcagcacctaagaaagat
tttgatgaagagatgaacacgatttgtaaagaggcgcgtgattcttttaaaaaacgaatt
gagaaaataaaggaaaaatatttaacgtactcgaatgaaacgcatttgattcattttaaa
aagagtcaagaagtggtagaagcattagcgaaaatggttcttctatttcatgagcgtttt
agcgaagcgaaattaaaacgacaattacttgatttttctgatttagagtggtatacgctt
cggttgttaatccaagatggacaagcaactgcggtagcatttgatattcatgctcaattt
aaggagattatgattgatgagtatcaagatactaatttcatgcaagaatcgattgttcag
gcgattgccaagattaagtcacctgaaattccaattttcatggtaggggatgtcaagcag
tcgatttatcgattccgactcgcagaaccaagtatttttcaaggaaaatatacgatgttc
tctgatggaaatggaaaaggtcataaaattgatttaatgaaaaactatcgttctcatcag
caagtgattgattcaacgaattatatttttaagcagttaatggatgagccggtgggtgaa
attaattatgatgaagcggcaatgcttcgacttggcgtgttaggtgaagtgaatgatcca
tttaaccaaaatgaagtacatttgattgataaattgcaagtcacagatgatgaaacggat
ttaagtaccgttgaacttgaagcgcatcacattgcgagaacaattaagcgttggatggat
tctaaacaagaagtatatgatcgaaaattaggtcgcatgcgtcttttaacttatcaagat
attgtgattttaatgcgatcgttaagcagtgtgacaacgtttcaagatgtttttcgtcaa
tatcatattccgctgtttaccgaacaaaataccgatttgtttgattcaattgaaattatt
aatatggtttcttgtttaaaagtcattgataacccttatcaagatattcctttggttggc
ctgatgcgatcaccgttatttttctttaatgagcgtgaattgtcactcatcaaagtttca
agtaaagcttcatccttttatgaactcgtccaattttatcaaaatcacggagaggatgag
tttttaaaacaaaaaacaaagcgttttgttgagatattagaacgttggcgtttcgaagcg
aaaacacaatcgctagcaagtttgatcacccttatttatgaacaaacgctttattatgag
tttgtgatgggacttccacatggttatttaagaaaggcaaatttagatgtttttgtcgat
aaggcacgccattatgagtcgagcactaaaaaaggtttatatggatttgttaattatatc
gatcgaatgcaagctcttggaaaacattttggaaaagctaaaacggtcacagcgaatgaa
gatgttgttcgaattatgtctattcataaatcaaaagggcttgaatttcctgttgtgttt
atttctcaaattcaaaagaaatttaatgttcaggacgaaaaaggaaattatattttacat
aaaaagtatggagtagcagtcaagtacattgattcgcagttaagctttactcaaaaaaca
attgctcaaaatgtggtagcaagcctcattcatcgagaaatgttagcagaagaaatgcgt
cttttatatgtggccatgacacgtgctaaatctaagcttttatttacaggagtttttgag
gttgagaaaaagctcgcttctttaaaagaagtcatcactgaatcgggtgtgaggttacca
gattcgtatcgattaaaagcagttaattatgctgattggattttaccagctattttaaag
catccagataaccaagagatcgtggcgacctatttaggggtaacaccgacttgtttagaa
gatgctagttcatggaaaatagaaatattctcccaacaacaggagcttgaacaatcgatg
aaggtagaagagtcattagctaaacaaccccctgttattgattttgaaaaaattttttca
acgcgttatgagcatcaggaactagttgagattaacgcaaagcaatctgtttcacagcgc
aaactggctgaggaaacacctatgtttaaagggattcctgagcttagaccacaagtggct
tatgatcggccatcatttatgagagaaaagaaaattagtggagctgaagcgggaaccgca
ttgcatcaatttatgcagcatttaccggtgatgaaaaatcatacgttagaaagtttacag
caagtcaaagaacgagtgattgaaaaggaaatgatgaccgaggagatgagtagtcgaatt
gatctagggcaagtgctagagtttactaaaagtcctctttatgaaaaaattataacagcg
ttatcagttaaaaaagaggttccatttatgacgttagtaaaggtggatgagcatgaacag
tctcaaatcttacttcaaggggtcattgacttattagcagaatttgaagatgaagtctat
atcgtggattataaaaccgactatattcgtgactttgaggtacaacaacaagaactaaaa
caaagatacgaaacacaaatgaaatactattctaaagcgattaaagaaatattcccaact
aaaaaagtaagttgtcatgtttatttcttaaaagtatcgcagtgtctcgtttattaa
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integrated database retrieval system
