Trichinella spiralis: Tsp_00911
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Entry
Tsp_00911 CDS
T01609
Name
(RefSeq) putative U3 small nucleolar ribonucleoprotein MPP10
KO
K14559
U3 small nucleolar RNA-associated protein MPP10
Organism
tsp
Trichinella spiralis
Pathway
tsp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Tsp_00911
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tsp01009
]
Tsp_00911
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsp03009
]
Tsp_00911
Protein phosphatases and associated proteins [BR:
tsp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
Tsp_00911
Ribosome biogenesis [BR:
tsp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
Tsp_00911
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mpp10
Motif
Other DBs
NCBI-GeneID:
10904636
NCBI-ProteinID:
XP_003376710
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MEFHDALNKMTEHCRRHLNLRQRQFLFSSEICCVTIIKNNFFMDADKNVSSWESILKYIE
VPDEFIQVSSSGESLSFLKDFKKCYDNLRQCLPSASVGEKSALPNLHVDGFDEESIWQQV
DLHNRDRLRIVRQALKCVGHAGTVQGDDDDVSYSDDDEKYASDLEVKGDVDMGTSLAEYF
NVRNEDYSADEELENNDDEEDKIDEEDDDEVDEEEEVDEEEEIDEEEEDDDEQIDDEEMD
DEELDETDVDEEEEEEEEEVKKYNGTKSTKADKFFNRDEMENFLNKMDENERKAESSNEE
LDEYEEMDEDKEGGKHYHYSEFFDPIPPDESKQEKKSSFQKRQERKGTNIGIDAKWLAFQ
MRKTISELEEENLKEKSWQMRGEIIAKARPENSLLSENLLFDRATKLPPIITAESSMTLE
EMIKRRIRDGAWDDPVRKVKPITEPAVYKNKLILDQQKSKQSLSEIYEQEYLKKTQKLEE
EQKNPAHEEIRKGLKDLFFKLDALTNFYYTPKTPVPELKVVDNMPSVVMEEVAPIAVADS
TLLAPEEVKEKAVHLPMAPEEMTRTDRNRARRKLKRMKRLRAKHQANNNSKQLVPKDKMK
LLQKVGTVRTAKTFDNEKHTTKSTAFFERMNREVKRLIQNELGENVKSKKKQLLKKVALK
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggaatttcacgatgcactgaacaagatgactgaacattgtcgccgacacctgaatctt
cgtcaacgacaatttctgttttcatcagagatctgctgcgttacaataatcaaaaataat
tttttcatggatgcggataaaaatgttagttcttgggagagcatattaaaatatatagag
gtgccggatgaatttattcaagtaagctctagtggggaaagtttaagtttccttaaagat
ttcaaaaaatgttatgataatttgcgacaatgtttaccgtcagctagtgttggcgaaaag
tcagcgcttccgaatcttcacgtagacggttttgatgaggagtccatatggcagcaggtc
gatttgcacaatagagatcgtttgcgaattgttcgtcaggctttaaaatgtgtcggtcat
gctggaactgttcaaggtgatgatgatgatgtctcttattcagacgacgatgaaaaatat
gcttctgatttggaagtgaaaggggatgtggacatgggcaccagtttagcagaatatttt
aatgttagaaatgaggattattctgccgatgaagaactggaaaacaatgacgatgaagaa
gataaaatagatgaagaagatgatgatgaagtagatgaagaggaagaagtggacgaagag
gaagaaatagatgaagaagaagaagatgatgatgaacaaatagatgatgaagaaatggat
gatgaagagttagatgagacagatgtagacgaagaagaagaagaagaagaagaagaagta
aaaaagtataatggtacaaaatcaacaaaagcggataaattttttaatcgagatgaaatg
gaaaattttttaaacaaaatggatgaaaatgagcgaaaagcagaatctagtaacgaagag
ttggacgagtacgaagaaatggatgaggataaggaaggtggaaagcattatcattattct
gaattttttgatccaattccaccggatgaaagtaaacaagaaaaaaaatcctctttccag
aaacgtcaggaacggaaaggtactaatattgggattgatgcaaaatggcttgcatttcag
atgcgaaagacaatcagtgaactggaggaggaaaatttgaaagaaaaatcttggcaaatg
agaggcgaaataatagccaaagcaaggccggaaaattcactgctttctgaaaatttgctc
tttgaccgtgctacaaaattgccaccaataataacggctgaatcgtccatgacattggag
gaaatgatcaaaagacgcattcgagatggagcttgggacgatcctgttcgcaaagtgaag
ccgattactgaaccggcagtttacaagaataagttgattttggatcagcaaaagtcgaag
cagtcgttgagtgaaatttatgaacaagaatatcttaagaagactcagaagttggaagaa
gagcagaaaaatccagcgcacgaagagattcgcaagggtttgaaagatttatttttcaaa
ttggatgcattgactaatttctactacactccaaaaacgccagttccagaattgaaagtg
gtggacaacatgcccagtgtggtaatggaagaggtggcgccaattgctgttgccgattct
acacttctggcaccggaagaagtgaaggaaaaagctgtgcatttgccaatggcaccggaa
gagatgaccagaacggataggaaccgtgctagacggaaattgaagcgtatgaaacgtttg
cgtgctaagcatcaagccaacaacaattccaagcagttggttccgaaggataagatgaag
ttgctgcaaaaagttggaactgttcgaactgcgaagacttttgataatgaaaagcatacg
acaaagtcgacggcatttttcgagcgcatgaatagagaagtgaaaagattgattcaaaat
gaacttggtgaaaatgtgaaatcgaaaaagaagcaacttttgaagaaagttgctttgaaa
tga
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