KEGG   Trichinella spiralis: Tsp_04151
Entry
Tsp_04151         CDS       T01609                                 
Name
(RefSeq) putative F-box domain protein
  KO
K10307  F-box protein 30
Organism
tsp  Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tsp04121]
    Tsp_04151
Ubiquitin system [BR:tsp04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     Tsp_04151
SSDB
Motif
Pfam: F-box_4 zf-TRAF_2 F-box-like F-box zf-TRAF ZSWIM3_N
Other DBs
NCBI-GeneID: 10904736
NCBI-ProteinID: XP_003374966
LinkDB
Position
Unknown
AA seq 405 aa
MTLCPNGCEASMHRCKVEEHKQEICPKSQVDCINVGYGCPVKLKRRQRAAHLTHCPAAVI
YCAIERHRKLLPPDERRQIANTNNHHQRQQQHHEPCSEIDLCLALSDQRRIFTSAKSMLN
ALEEEERAEATLSPVARECILCKQDPSSQHLHVVGSMDQDHWISSNGMEEKKPNNWPKPP
APFYIKHGLQVGFSADFPPKHSSTPKHQASLVCGQRVRRDQYAQHVRNLHVDIVSSIDGW
LLARCPMYMQGCEWVRNRLIPTNNTTLHYLTWTDAIGVKMDHTQSCMPSTDTAALKLTDL
PVEILEQVFSKLDSISLRATAATCRRLRQVSLKQLNKHGLVELIWHRNKSGWKATELRWS
FSNTFQKIDQWHLLPTSQIGDHLRHCPYLNPVKHAQPMPVLRFVM
NT seq 1218 nt   +upstreamnt  +downstreamnt
atgactttgtgtcccaacggttgtgaagcgtccatgcaccggtgcaaagttgaagaacac
aagcaagaaatatgcccgaaaagtcaagtggactgtatcaacgtcggctacggatgtccg
gtgaaattgaaacgacgccaacgtgcagcccacttgacccattgtccggcggcggtcatt
tattgtgctattgaacgtcatcgtaaacttctccctccggatgagcgaagacaaatcgcc
aacactaacaaccatcaccaacgacaacagcagcaccatgaaccatgcagtgaaatcgac
ctgtgtttggcgttgagtgaccagaggcgcattttcacttcggcaaagtcgatgttgaac
gctttggaagaagaagaacgagccgaagcgaccctgtcaccagtggccagagaatgcatc
ctctgcaagcaggatccgagcagtcaacatttgcacgtcgtcggttcgatggaccaagac
cactggatatcgtcgaatggaatggaagaaaagaaacccaacaattggcccaaaccgccg
gctccgttttacatcaaacacggcctgcaggttggcttttcggccgacttcccgcccaaa
cattcttccactccgaaacaccaggcgtcgttggtctgcggccaacgggtccgtcgcgac
caatacgcccaacatgtccgcaatttacacgtcgacattgtcagctcgatcgacggttgg
ctgcttgcccggtgcccaatgtacatgcaaggctgcgaatgggtacgaaatcgtctgatt
cccacgaacaacacgaccctccattatttgacttggaccgacgccattggggtgaaaatg
gaccacacccagtcgtgcatgccgtcgaccgatactgcagcgttgaagctgacggatctt
ccggtggaaattttggaacaagtattttcgaagctcgattcgatcagtctacgcgccact
gccgccacatgccgtcgtctcagacaagtcagcttaaagcagttgaacaagcacggctta
gtggaattgatctggcatcgcaacaagtcgggctggaaagccaccgaattgcgttggtca
ttttcgaatacttttcaaaaaatcgaccaatggcatctactgcccacaagtcaaatcggt
gaccacttgcgtcactgcccctacctgaaccccgtcaagcatgcgcagccaatgcccgta
cttcggttcgtgatgtga

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