Trichinella spiralis: Tsp_04340
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Entry
Tsp_04340 CDS
T01609
Name
(RefSeq) ubiquitin carboxyl- hydrolase 33
KO
K11848
ubiquitin carboxyl-terminal hydrolase 20/33 [EC:
3.4.19.12
]
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tsp01002
]
Tsp_04340
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsp04121
]
Tsp_04340
Enzymes [BR:
tsp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
Tsp_04340
Peptidases and inhibitors [BR:
tsp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
Tsp_04340
Ubiquitin system [BR:
tsp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
Tsp_04340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
DUSP
UCH_1
Motif
Other DBs
NCBI-GeneID:
10905251
NCBI-ProteinID:
XP_003375154
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MLTLQECSFLVSHNKEIFQDISLSIPNLEQLVLMQNASINGNEYVSPSSIANQSWLSWLT
LRFKEYISRMDLTLSDCLKLFFSPEDLRGDDMYRCDRCKSLQPGVKICRLLKTPQILCIH
IKRFRHEASSSFKLNNRIGFPLEGLDLSDFVQGRSSDLHTYNLVAVISHSGHADAFCHHL
YLGGHYVSYCMNHSNYRWYLFDDETVTAVDPCTVENVEAYVLFYEKTSNTIGFVREQASA
LFENSHLLSPVETSFYYISMEWVIRLSTFAEPGPVNNYSFLCRHGLVNVKKLSSMHNYCL
KLSPSLWNYLRVKFGGGPVCRHLKHCIICSAYQEAFESRRKHELSKFYRYQNDDEYFISK
SIADENHDFASSSRLICTKWLRRWKAFVFAETDELPGPIDNSCMVPVPLRNGSAKTISIE
VSDLLPSKTIRCCGQLIVHELILPHCLRCLLFDHRQWTLTALPMNQITLSDAVGRCSMFY
ANC
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgcttacgttgcaagagtgttcgtttctagtatcccataataaagagatatttcaagat
atttcgttatctattcccaatctggagcagttagtactgatgcaaaatgctagtattaat
ggtaatgaatacgtttcaccatcgtcaattgcaaatcagagctggctttcatggttaaca
ttacgctttaaagaatatatctcacgcatggatctaacgctaagcgattgcttgaaatta
ttcttctctccagaagatctcagaggtgatgatatgtatcgttgtgatcgctgtaaaagt
ttgcaaccaggggtgaaaatctgccgcctgctcaaaacacctcagatactttgtattcat
attaaacgttttcgccacgaagcatcgtctagctttaaactcaacaatcgcataggcttt
cctctggaaggacttgatctcagcgattttgttcaaggtcgctcaagtgacttgcacacc
tacaacttagtagctgtaatatcacattctggccatgcagatgcattttgtcatcattta
tacttaggtggacattatgtttcttactgtatgaatcattcaaattatcgatggtattta
ttcgatgatgaaacagtgacagctgttgatccatgtacagttgaaaatgtagaagcttat
gtgttattttatgaaaagacatcgaacacaataggatttgttcgagaacaagcaagtgca
cttttcgaaaattctcatctactgtcacctgtcgaaacatcattttattacattagcatg
gaatgggtgattcgtttgtcaacgtttgctgaaccaggtccagtgaacaattattcattc
ttgtgtcgacatgggcttgtaaatgtgaaaaagctaagctccatgcacaactattgcctc
aaactgagcccgagtctttggaattatcttcgtgtcaagttcggaggtgggccagtttgt
cgccatctaaagcattgcattatttgttccgcttatcaggaagcgtttgaatctcgccgt
aaacatgaactttcaaaattctatcgctatcaaaacgatgatgaatatttcatttctaaa
tcaatagctgacgagaatcacgattttgcatcttcatcgcgtttgatttgtaccaaatgg
ttgcgtcgatggaaagcatttgtttttgccgaaacagatgaattgccgggtcctatagac
aacagttgcatggttcccgtccctttgcgcaacggatctgcgaagacaatcagcatagaa
gtgtcggatttgttaccaagtaaaacgatacgttgttgtggtcaattaattgtgcatgaa
ttaattttgccgcactgtttacgttgtttactgtttgatcaccgtcagtggaccctcact
gcgttgccaatgaaccaaataaccttaagtgatgctgttgggcgttgttcaatgttttac
gctaattgttaa
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