Trichinella spiralis: Tsp_05187
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Entry
Tsp_05187 CDS
T01609
Name
(RefSeq) putative ShTK domain protein
Organism
tsp
Trichinella spiralis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ShK
Motif
Other DBs
NCBI-GeneID:
10908927
NCBI-ProteinID:
XP_003369777
LinkDB
All DBs
Position
Unknown
AA seq
1289 aa
AA seq
DB search
MVDPANEKPKKKSLDTDNLKSKIDGFDWNGCPVTFFCRFLRSTQTGIVSWMPYNIAAMHT
AMGIISNRQLLIIALLQLTFSILVSTSDSLSMNQIKQIITSLSPMGKAWIFTEDASCGNK
KCKAPYQLCTISYIAKGSEELHYDCSKVPESCLSLIRSIKKKTLAAKQRDHPLRDIPVQQ
ESEASACFCCQITQLRIRNILMQTTDADETSEAASNGEKEDSSCDNSAALSISQQSFPFW
GSIIIAPVAGCFNGHNMCCEWASKGECNRNPVMMKSLCKQACGTCSCQADEILLCKPVVN
TISCLPPKKTSGCKPKKPKVAPTTTALPESPAGDSEESLVVIDVEEPLIISEEVEKATDT
EQPPAESVSVEVPEEVVSQELPTVEETEVAETTSAYVTEKTETAVEEVVTTVKKEEEEEE
EEEEQLSTETAIAVSEEEEAPSEEVKVETTEAPAEAEISTETVEKVVKETVEEVSPAEIT
DITPEIRTEEIEAEPISEGEAVEEEQPEEIEKEPMEIPSEVPSEAPPEVLPEIPSEVSSE
APSETTLSITCAEPEKEIAEVETTEKVSEQPEVTTETSPSEISEVEEEPQTTISEAAETT
ETESTEAPEIITEAAMEAEIETEVTETPQAFPETTETEITPEVMATTEMPSTVTEEVTEP
EVISTEIPATTEQPISSRITPQAPYPTGPPVTETVPQSYPTTTPQPPGYETTTSRPIYTR
YGPPAGMQDTCPDLLITCAFWASQGECSKNPYWMKPNCQKSCNSCGATVSSVDSPSPKPV
GPSLNVSDFQDALTVMSCASSGNHLESAYQTECTWQAIAHFHATHVECSQLQCLVVLLWL
TVVETTSAKNITILNFQQFTLKYYLALKLTKANLSQAFQANIYTFLFYFIEELNFLKCYC
CIIIDAIFAFLQLNFLFLGQLSYRVVASSYGAPEPGKKWVTDKISSKCGHFTCKVPQFWC
STLDETTEESKNASVYQCIQLKESCVILLDNAVLPTKSVRPESSIIMAKKDQDITKPQLA
TMTKNKMADKNEDSFWKNIFFGEKDLKLAAKLTGLNIAEEESLLPPLQETFILNNSNNNK
SSATHAVQSDAADLINKKPILGRENISKSTKFNETDYTDSKLLDFLFVFSDTHRNFLSKK
NEINTLQCTDKHIKCLFWSLIGECDKNPFWMLPNCQKSCFSCGMTVADVNTPSPIIEHHT
KLAVYLLLLIIFWNESAHAAAKCVTLIVYAAKIMTNYVSFGPQSVNAKAIQLGWDYIADY
PATHAFQKHKYRFKKLIFTIHTNVLFSSQ
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atggtagatcctgcaaacgaaaagcccaaaaaaaagtcacttgatacagataatttgaaa
agcaagatagatggatttgattggaacggttgccctgtcactttcttttgtcgttttctc
agatcaacgcaaactggaatagtcagttggatgccttacaatattgctgccatgcatact
gccatggggataattagcaacaggcagctgttaataattgctcttctccaattgactttc
tccatactagtatctacgtcggattctttgtctatgaatcaaattaaacaaataataact
agcttatcaccaatgggtaaggcatggattttcactgaagatgcctcgtgtggaaacaaa
aagtgcaaagcaccttatcaactttgcacaatttcatacattgctaaaggatctgaagaa
ctgcactatgactgttctaaagttcctgaaagttgcctttcattaatacgttccattaaa
aaaaagacactggctgccaaacagcgagaccatcctttgcgtgatattcccgtgcaacaa
gaatctgaagcctcagcatgcttctgctgtcagataacacaattacgtattagaaatata
ttgatgcaaacgactgacgcagacgaaacaagtgaagctgcaagtaatggagaaaaagaa
gattcctcttgcgataattctgcggcattaagcatatcgcaacagtcgtttcctttctgg
ggctcaataattattgcgccagttgcaggatgtttcaatggacataacatgtgctgcgaa
tgggcatctaaaggagaatgcaatcgcaatccagtgatgatgaaatctttgtgcaagcaa
gcttgtggtacatgcagctgtcaagcggatgaaattttgctctgcaaaccagttgtaaat
actatttcttgtctgccaccgaaaaagacgtcagggtgtaaaccaaagaaaccaaaagtt
gcaccaacaactaccgctttacctgaatccccagcaggtgattctgaagaatcattagtt
gttattgatgtagaagagccgttaatcatttctgaagaagtcgaaaaagctacagatact
gaacagccacctgctgaatcagtttctgtagaagttcctgaggaagttgtcagccaagaa
ctgcccactgttgaggaaactgaagttgctgaaacaacttctgcatatgtaacggaaaaa
actgaaactgctgtagaagaagtagtaacaactgtcaaaaaagaagaggaagaagaagaa
gaagaagaagaacagttatcaacagaaactgctatagcagtatctgaagaggaagaagca
ccatcagaagaagtgaaagttgaaacaacagaggcacctgctgaagctgaaatatcaaca
gaaactgttgagaaagttgtaaaagaaactgtagaagaagtttcaccagcagaaataact
gatataactccagaaataagaactgaagaaatagaagctgagccaatttctgaaggagaa
gcagttgaagaagagcagccggaagaaatagaaaaagagccaatggaaattccttctgaa
gtcccatctgaagcccctcctgaagttctacctgaaatcccttctgaagtctcatctgaa
gccccttctgaaacaacactaagcataacttgcgcagaaccagaaaaagagatcgctgaa
gtagaaacaacagaaaaagtttctgagcagccagaagttacaactgaaacttcaccttct
gaaatttctgaagttgaagaagaaccgcaaactacaatttcagaagctgctgaaacaact
gaaactgaatctacagaagcacctgaaattataactgaagctgctatggaagctgaaatt
gaaacagaagttactgaaacacctcaggcctttccagaaaccactgaaacagaaattact
ccagaagttatggctactacagaaatgccatcaactgtaactgaagaagtgacagaacca
gaagtaatttcaactgaaattcctgcaactactgagcagccaatttcaagtagaataaca
ccacaagcaccatatccaactggacctccggtaacagagacagttccacaaagctatcct
actacaacaccccaacctccaggatatgaaactacaactagtcgaccaatatatactagg
tatggacctccagctggaatgcaagatacgtgcccagatttgcttatcacttgtgccttc
tgggctagccaaggtgaatgcagcaaaaatccatactggatgaagccaaactgccagaaa
tcttgcaattcatgtggtgcaactgtttcctcagtagattcaccttcacccaagccagtt
ggaccgtcactgaatgtaagtgattttcaggatgcgttaacagtcatgagctgtgccagt
tctggaaatcacttggagagtgcatatcaaacagaatgtacatggcaagcaattgcccac
tttcatgcaacacatgtggaatgcagtcagctccagtgcctggtggtcctgttatggctt
acggtcgttgaaactacttctgctaaaaacattacaatattgaacttccaacagttcact
ctaaaatattacctcgcgttgaaattaacaaaagcaaatttaagtcaagcatttcaagct
aatatatatacatttttattttatttcattgaagaattgaattttttgaaatgctactgt
tgtattatcattgatgcaatatttgcattcttacaactaaattttctcttcttaggacaa
ctttcatatagggtagtggctagcagttatggtgcaccagaaccagggaaaaaatgggta
acagataaaatttcttctaaatgtggtcattttacatgcaaagtgccacagttttggtgc
agcactttggatgaaactactgaagagtccaaaaatgcttccgtctatcaatgcattcag
cttaaagaaagctgtgtaatacttcttgacaatgctgtattaccaacaaaatcagtccgc
ccggaatcttcaataataatggcaaaaaaggatcaagatatcaccaagccacaattagct
accatgacaaaaaacaaaatggctgataaaaatgaagattcattttggaaaaacatattt
tttggagaaaaggatttaaaattggcagctaaattgacaggtctgaatattgcagaagaa
gaatctctgttgcctccgttacaagagacttttattttaaacaatagcaataacaataaa
agcagtgctacacatgcagtgcaatcggatgctgctgatttaattaataaaaaaccaatt
ttgggtagagaaaacatttcaaaaagcacaaagttcaatgaaactgactatacagactcg
aagctgctagattttttatttgtattcagcgatacccatcgaaatttcctttctaaaaaa
aatgagataaacactcttcaatgtacagataaacacatcaaatgtttattttggagtttg
attggtgaatgtgataagaatccgttttggatgttgcctaattgccaaaaatcatgtttc
tcttgtggaatgacagttgctgacgtgaatacaccttctccaataattgagcatcacact
aaattagctgtatatttgcttttattaattatattttggaatgaatctgctcatgcagct
gctaaatgtgttacgttaatagtctacgctgcaaaaataatgacgaattatgtcagtttt
gggcctcagtcggtgaatgcaaaagcaatccaacttggatgggactacattgccgattat
cctgcaacacatgctttccaaaagcataaatatcgatttaaaaaacttatattcactata
catactaatgtgcttttttcaagtcaataa
DBGET
integrated database retrieval system