Trichinella spiralis: Tsp_08010
Help
Entry
Tsp_08010 CDS
T01609
Name
(RefSeq) putative fibronectin type III domain protein
Organism
tsp
Trichinella spiralis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
V-set
Pur_ac_phosph_N
C2-set_2
fn3_4
Motif
Other DBs
NCBI-GeneID:
10906567
NCBI-ProteinID:
XP_003373412
LinkDB
All DBs
Position
Unknown
AA seq
1229 aa
AA seq
DB search
MAIDVCVCVCVCVCVCVCVCVCVVVVVVTNCLQCKCIYENRIQFLHTPEDTVATPGSTVR
FQCIAVDEVGFQLESRWLHNDHLMPDMNVKENSSLVIVNVSEKDQGIYQCIVLSRHYGIL
RSGPANLTLAKFGPFVNQPTDIVVDNGGFGEFTCTIYSYPPATVHWYFNQRLIGDNSKHI
RVDNSGISSTLYVVNASVADQGTYFCLASNIAANATSRKAVLTISGNFTLDSLEHIRIFK
APQNLSVQLGKPAVFDFYYYSTKPVSVLWKREKVSFSSRAFKAVSSLVIQHVDEDDEEAP
QIVDPPVEVRGFRGETVRFVCNVAGTPTPDIYWYKDGERVLSKGRRKLFPTESHPPEKIS
KNQNMFVYKRDLVVSSFRPEEDGGIYQCFAENAYGTVSVAAALIPDSNNIIHDDGPKNLM
SEVSQIENQIILTWDEPQTLNGDLIAYIIHYHPTESGAENTYPVTPVDSCRYGTCRAICC
AHAEFELFTNYTFWVSALVQNDQRGSSFTRPSNEIVIPVWDGTAVMPALLTVVGVNDGLT
VFLKWNPPDSRFLRGVVTEYRIQYRLLSEKSEPSITVVPAFIEEFTVKDLTADGVYAFQV
VPRTRAGYPTNQKIGFPWLRYRAKQLAEDSMSAPNFEVISVNHSAIEVHVVEDFSAIGSK
WKIVLARPDNHAILFATVVPIKQNVVTIGNLDSNSLYEVTCSAMDKKGDFGLSIVRLIRT
VEQSNVEEFSAHHSIIPPPTNIQCKDKNPLGGIRLTWKPSLAKVSTYRVRYSRVLSDDEI
LNISAAHVHHRETETNEMIFTDLAKGKPFMFAVRAEAQNGITSWYSDDIVCIMPGSPPRE
PVALTIEYLNSTSVILRWRPPAISSSKEKILMYYISYAEDSNPSTSPDRKEITVDGEATC
VTVSNLSASAVYFFTASAVNAFGRSQESKCVPAVLRPPSTTNAIAPKVVIFERISYSEGI
LIGVCIAVLCILVCITVMVYRSKNFRICHNNSNEIGSRQNSLIRKHFQGASSVARSCDGL
EMQTLLPYMSEGYDFDLKPAIPFVSLKSNDGISKYSGFDAQKDLSVEQEEQVLVAVEVTH
HVIVDHHHHHHHQRMVANFKRVDTLSGNDSYNSAATPTSSTYDSKQHSDSIQYSSMPNLT
DSGVDFEDAEYSKCKLSAQKESRTLQMSESISNDDIFANCCSAVEAVTKNHANLNEDHLD
NDVDDGDNDDPTQGIAERADTFPVLQCNC
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atggcaatagatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtggttgttgttgttgtaactaactgtttgcaatgcaagtgcatttatgaaaat
cgaattcaatttctccatacaccagaagatacggtagccacacctggttcaactgtacgc
tttcaatgtatagccgtggatgaagtcggctttcaattagaaagtcgttggcttcacaat
gaccacctgatgccggatatgaatgttaaagaaaattcttcacttgtcattgtcaacgtt
tcagagaaagaccaaggaatttaccagtgcattgtattgtcaagacattatggaattttg
agaagcggccctgccaaccttactttggccaaatttggcccatttgtaaatcagccgacc
gatatcgttgttgacaatggtggctttggtgagttcacctgcacaatctattcttatcct
ccagctacagtgcattggtatttcaatcagcggctcattggcgataactctaaacacatt
cgagttgataattcaggaattagtagtactttgtacgttgtcaatgctagtgttgcagat
caaggcacttacttttgcctcgcatcaaacatagctgcaaatgcgaccagccgaaaagct
gttctaaccatttctggaaattttactttggactctttggagcatataagaattttcaaa
gcaccacaaaatttgtccgttcagctcggcaagcctgccgtttttgatttttactattac
agcactaaacccgtttctgtgctctggaaaagggaaaaagtatctttttcatctcgagca
ttcaaagctgttagtagccttgtaattcaacatgtcgatgaagatgatgaagaggctcca
cagattgtcgatcctccggttgaagtacgaggtttccgtggagaaacagtgagatttgtt
tgcaatgtagctggtacaccaacacctgatatttattggtacaaagatggcgaaagggtg
ttgtctaagggccgacgcaagttgtttccgactgaatcccatccaccggaaaaaatatct
aaaaatcaaaatatgtttgtttacaagagagacttggtggtttcgtcatttcgaccagaa
gaagatggtggcatttatcagtgctttgcagagaatgcatacggaacggtcagcgttgct
gccgcacttattccagactctaacaacattattcatgatgatgggccaaaaaatttaatg
tcagaagtgtcacaaattgaaaatcaaattatccttacgtgggatgaaccgcagacactg
aatggtgatttgatagcttacattatccattatcatccgactgaaagtggtgcagaaaat
acctatcccgtcacaccagtagattcttgtcgatatggcacttgtcgagcaatttgttgt
gcacatgcagagtttgaactgttcaccaattacacattctgggtatcagctttggtgcag
aacgatcaacggggtagctcttttacgcgtccgtccaatgaaattgttattcctgtttgg
gatggaactgctgtaatgccagcactgcttacagttgtcggagtgaacgacgggttgacg
gtattcttgaaatggaatccacctgattcacggtttcttcgtggagttgtcactgaatat
cgaattcaatatcgacttttgtctgaaaaatcagaaccaagtattacagttgtgccagct
tttattgaagaatttacagttaaagatttaacggctgatggtgtttatgcgttccaagtt
gtaccgagaactagagctggctatccaacaaatcagaaaattggttttccttggcttcgc
tatcgagcaaaacaactagctgaagattcaatgtcagctccgaactttgaagtaatttcc
gtgaatcactctgccatagaggttcatgttgttgaagacttctccgccattggtagcaaa
tggaaaattgtccttgctcgaccggataatcacgctatcctgtttgccacagtagtgcca
attaagcaaaatgttgtcacaatcggcaatcttgatagcaattcattatatgaagtgact
tgttctgcaatggacaaaaagggagactttggattgtcaatagtgcgtttgattcgtacc
gttgaacagagcaacgttgaagagttcagtgcgcatcattcaattatcccaccacctacc
aatattcaatgtaaggacaaaaatccactgggtggaataagattgacgtggaagccatcg
ttggccaaagtttctacctacagagtgcgctacagtcgtgtgctaagcgatgatgaaatt
ttgaacatttcagcagcgcatgtccatcatcgagaaaccgaaaccaacgagatgattttt
actgatttggcaaaaggcaagcctttcatgtttgctgttcgcgctgaagcacagaatggc
atcaccagctggtacagcgatgacatcgtctgcatcatgcctggaagtccacctcgagag
ccggtagcgttgactattgaatacttgaacagtacatcagtgattcttcgttggcggcct
ccggcgatttcatctagcaaggaaaaaattctcatgtactacataagctacgctgaagac
tcgaatccgagtacttcaccggatagaaaagagatcaccgttgacggtgaagcgacttgt
gttacagtttctaatttatccgcatcagctgtatacttttttaccgcttcggctgtgaac
gcttttggacgaagccaagagtcgaagtgtgttccagctgttttgcgaccaccgtcaact
acaaatgctattgcaccaaaagtggtcatttttgaacgcatctcctacagtgaaggcata
ctgattggcgtctgcattgcggtgctttgcattcttgtttgcataacggtgatggtctat
cgttcgaaaaactttcgcatctgtcacaacaattctaatgagattggctctcgtcagaac
agtttgattcgaaaacattttcaaggcgcatcttcagtagctcggtcgtgcgatggtctg
gaaatgcagacactgttgccatatatgtcggaaggttacgactttgatttgaaacctgca
attccattcgtgtcgttgaagtcgaatgacggcatttccaagtacagtggattcgacgct
cagaaagatttgtcagttgagcaagaggagcaggtgctggttgcagtagaggtgacgcat
catgttattgttgatcatcatcatcatcatcatcatcagcgaatggtggcaaatttcaaa
cgggtggatacactgagcggtaatgattcgtacaattctgcagcaacaccaacgagctcc
acatacgatagcaaacagcacagtgacagtattcaatattcatcgatgccaaatttaact
gattccggagttgattttgaagacgcagaatattccaaatgcaaactgtcagcacagaaa
gaaagcagaacattgcagatgtcagaaagcatcagcaacgatgacatttttgcaaattgt
tgcagtgctgttgaagcagtaacgaaaaatcatgcaaatttgaatgaagatcacttggac
aatgatgtggatgatggagataatgatgatccaacccaaggcatcgctgaacgagcggac
acttttccagtgttacaatgcaactgttga
DBGET
integrated database retrieval system
