Trichinella spiralis: Tsp_08149
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Entry
Tsp_08149 CDS
T01609
Name
(RefSeq) putative mediator of RNA polymerase II transcription subunit 17
KO
K15133
mediator of RNA polymerase II transcription subunit 17
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsp03021
]
Tsp_08149
Transcription machinery [BR:
tsp03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Head
Tsp_08149
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
10906711
NCBI-ProteinID:
XP_003373556
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Position
Unknown
AA seq
601 aa
AA seq
DB search
MNSGDADDEEEQKLLVAVEPLREWKVFDISFSGVERYLQPLHYNDHVAELAHNVRWSKLV
GKSSRNLSTISRTAKADDPTSGRAAWENVARSLHSALTEMVVLMDLIKVTMTGRYMAFDA
AMHEMSDDSKPMFKSGDAYALFAKRKALSITSNVLLDFVGKQKVKLSGIGSIQQAMQPDE
ESTYLREMAEMRKYWRLRKSKNSILGDLSLGHCMFVCLCMVSCLHLLLFVCVLESGCRRF
ERKSTVEDTFNNWQAFPQVGSVYASGRFEFNNVGIDSQADRHLEGQVRSGSVINAVSRFV
FIGIRQFYANQAQAVFFGLNFLLQISKEAIVFHDNTSFIYRDFLIIRLDSRNAVLVSLFS
REELEEARKNMPKDKRTKRLIAETKLQCIFALKQRVCSRYMYLIDMVGNFVSTKPITAPL
IIQTHPAPLAGVEMKSQEQIEHLEECQPSFILHSILDDARHYILITEMKKALDQLSSAQK
DPVMTVYWCYDCCRYNTIARLSLVIPFYEYCGSLLRILYPLDSDQVQVFLLKIDGENPSW
DNWHNCTPDAYVPIDLNSMAVDVVSPRTTMHFTIRLFVNNIHILFAQFCVVAKVQIKLWF
L
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaattctggagatgccgatgatgaagaagagcagaaactgttggttgctgttgagcct
ttacgtgaatggaaagtgttcgatatatcattcagtggtgtcgaaagatacttgcaaccg
ttgcattacaatgatcacgtggctgagttagcgcataatgttcgatggtcgaaactggtt
ggaaaaagcagtagaaatttgtcaactataagtagaacggcaaaagcggatgatccaact
tcaggccgtgctgcttgggagaacgttgcgagatcattgcattctgcgcttacagagatg
gttgttttgatggatttgataaaagttacaatgactggtcgatacatggccttcgacgca
gcaatgcatgagatgtcagacgacagcaaaccaatgtttaaaagtggtgatgcgtacgca
ctgtttgccaaaagaaaggcgttgtcaattacaagtaatgttttgctggattttgtggga
aaacagaaggtaaagctgagcggaatagggtcgatccaacaggcgatgcagccggatgaa
gagtcgacttatttgcgcgagatggctgaaatgagaaaatattggcgtttgagaaagtcg
aaaaattcaattctcggcgatttatctttaggtcactgtatgtttgtttgtttatgtatg
gtttcttgtctgcatctgcttctttttgtttgtgtgctcgaatccgggtgcagacgattt
gaaagaaaatcgacagttgaggatacatttaataactggcaagcatttcctcaagttggt
tccgtatatgcgtcaggtcgtttcgaattcaacaacgttggaattgacagccaagccgat
cgtcacctggaaggacaggttagaagtggctcagtcatcaatgctgtttcgagatttgtt
tttattggtattcgtcaattttatgcaaatcaagcacaagcagtttttttcggtctgaat
tttttgttgcagatttccaaagaagcgattgtgttccatgataacacgtcgttcatttac
agagatttcctcataataagattggacagcaggaatgctgtgcttgtttcgttattttca
agggaagagctcgaagaagctaggaagaacatgcctaaagacaaacgcacgaaacgttta
atagccgaaacgaaactgcagtgcatttttgcactcaagcagcgcgtatgcagccgatac
atgtacctgatagacatggtgggcaattttgtcagcaccaagccgatcactgcgccgttg
attattcagacacacccggcaccgttggccggtgttgagatgaaaagccaagaacagatt
gaacacttggaagaatgtcagccatcatttatcttgcacagtattttggatgatgctcga
cattacatattgattacagagatgaagaaggcattggatcagttgtcatcagctcagaaa
gatccagtcatgactgtgtattggtgttatgattgttgtcgttataacacgattgcacgc
ttgagtttagttataccattttatgaatattgcgggagccttctgcgcattttgtatcca
ctcgattcggaccaagtgcaagtatttttactaaaaatcgacggtgaaaatccgtcctgg
gacaattggcacaactgtacgccggatgcttacgtgccaatagatctgaatagtatggct
gttgatgttgtatcgccacgcacgacgatgcatttcacaattcgacttttcgtgaacaat
attcacattctgtttgctcaattttgcgttgtggcaaaagtccaaatcaaattgtggttt
ttataa
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