KEGG   Trichinella spiralis: Tsp_09456
Entry
Tsp_09456         CDS       T01609                                 
Name
(RefSeq) GTP-binding protein Ypt3
  KO
K07905  Ras-related protein Rab-11B
Organism
tsp  Trichinella spiralis
Pathway
tsp04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    Tsp_09456
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tsp04131]
    Tsp_09456
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tsp04147]
    Tsp_09456
   04031 GTP-binding proteins [BR:tsp04031]
    Tsp_09456
Membrane trafficking [BR:tsp04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab GTPases
    Tsp_09456
Exosome [BR:tsp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Tsp_09456
  Exosomal proteins of other body fluids (saliva and urine)
   Tsp_09456
  Exosomal proteins of colorectal cancer cells
   Tsp_09456
GTP-binding proteins [BR:tsp04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab11/25 [OT]
    Tsp_09456
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 RsgA_GTPase GTP_EFTU AAA_22 PduV-EutP ABC_tran AAA_16 TniB AAA_24
Other DBs
NCBI-GeneID: 10902742
NCBI-ProteinID: XP_003371243
LinkDB
Position
Unknown
AA seq 330 aa
MKTVARRFSFTLLYNSCSREFTANHIMVTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRN
EFNLESKTTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIA
KCAFFACFLNTSARLIQKLIQLVSLVSLKGICQGYLITPHVTYENVERWLKELRDHADQN
IVIMLVGNKSDLRHLRAVPSDEAKAYTEQNCLSFIETSALDSTNVEAAFTNILTVCCWLG
CCHAGRGEDLLNSSNGAFNFVQHFEAVVRGAPERLDYAVEQHGQHTANHQLRRQTTLLLL
LVNSSEREMRKANCTTSVAAVAKVSKDHSH
NT seq 993 nt   +upstreamnt  +downstreamnt
atgaaaaccgtagctcgacgattcagttttacattactttataatagctgcagtcgcgaa
tttacagctaaccacattatggtgacgaaagatgatgaatacgattacttatttaaagtg
gtgcttattggagattcaggagttggtaagagtaatttattatccagatttacgagaaac
gaattcaatttggaatccaagacgaccattggtgtggaatttgctactagaagtatccaa
gtcgacggcaaaacgataaaagctcaaatttgggatactgctgggcaggaacgttacaga
gctattacttctgcatattatcgcggagccgttggtgcgctcttggtttacgacattgct
aaatgcgctttctttgcttgtttcctgaacacgtcagcacgattgatacagaagttgata
cagttagtatcactggtgagtcttaagggaatatgtcagggatatttaataaccccgcac
gtgacgtacgaaaacgtggaaagatggctaaaagagttacgtgatcatgctgaccaaaat
attgtcattatgctggttgggaacaagtcggatttgcgtcacctacgcgctgtgcctagc
gatgaggcgaaagcgtatactgagcagaattgtctctctttcattgaaacttctgctctg
gattcgaccaacgtcgaagcagcatttaccaacattttaactgtatgctgttggttgggt
tgttgccatgctggaaggggagaggatttattgaattcttccaatggcgcgtttaacttt
gttcagcatttcgaagcagttgtccgaggggcgcctgagcggctcgattatgccgtcgag
caacacggtcagcatacagccaaccaccaacttcggagacagacaacgcttctgttgctc
cttgttaattcaagtgaacgcgaaatgagaaaagcaaattgtaccacttcagttgctgct
gtagcgaaagtttccaaagaccattcacattga

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