Trichinella spiralis: Tsp_09456
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Entry
Tsp_09456 CDS
T01609
Name
(RefSeq) GTP-binding protein Ypt3
KO
K07905
Ras-related protein Rab-11B
Organism
tsp
Trichinella spiralis
Pathway
tsp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
Tsp_09456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_09456
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsp04147
]
Tsp_09456
04031 GTP-binding proteins [BR:
tsp04031
]
Tsp_09456
Membrane trafficking [BR:
tsp04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
Tsp_09456
Exosome [BR:
tsp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Tsp_09456
Exosomal proteins of other body fluids (saliva and urine)
Tsp_09456
Exosomal proteins of colorectal cancer cells
Tsp_09456
GTP-binding proteins [BR:
tsp04031
]
Small (monomeric) G-proteins
Rab Family
Rab11/25 [OT]
Tsp_09456
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
RsgA_GTPase
GTP_EFTU
AAA_22
PduV-EutP
ABC_tran
AAA_16
TniB
AAA_24
Motif
Other DBs
NCBI-GeneID:
10902742
NCBI-ProteinID:
XP_003371243
LinkDB
All DBs
Position
Unknown
AA seq
330 aa
AA seq
DB search
MKTVARRFSFTLLYNSCSREFTANHIMVTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRN
EFNLESKTTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIA
KCAFFACFLNTSARLIQKLIQLVSLVSLKGICQGYLITPHVTYENVERWLKELRDHADQN
IVIMLVGNKSDLRHLRAVPSDEAKAYTEQNCLSFIETSALDSTNVEAAFTNILTVCCWLG
CCHAGRGEDLLNSSNGAFNFVQHFEAVVRGAPERLDYAVEQHGQHTANHQLRRQTTLLLL
LVNSSEREMRKANCTTSVAAVAKVSKDHSH
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccgtagctcgacgattcagttttacattactttataatagctgcagtcgcgaa
tttacagctaaccacattatggtgacgaaagatgatgaatacgattacttatttaaagtg
gtgcttattggagattcaggagttggtaagagtaatttattatccagatttacgagaaac
gaattcaatttggaatccaagacgaccattggtgtggaatttgctactagaagtatccaa
gtcgacggcaaaacgataaaagctcaaatttgggatactgctgggcaggaacgttacaga
gctattacttctgcatattatcgcggagccgttggtgcgctcttggtttacgacattgct
aaatgcgctttctttgcttgtttcctgaacacgtcagcacgattgatacagaagttgata
cagttagtatcactggtgagtcttaagggaatatgtcagggatatttaataaccccgcac
gtgacgtacgaaaacgtggaaagatggctaaaagagttacgtgatcatgctgaccaaaat
attgtcattatgctggttgggaacaagtcggatttgcgtcacctacgcgctgtgcctagc
gatgaggcgaaagcgtatactgagcagaattgtctctctttcattgaaacttctgctctg
gattcgaccaacgtcgaagcagcatttaccaacattttaactgtatgctgttggttgggt
tgttgccatgctggaaggggagaggatttattgaattcttccaatggcgcgtttaacttt
gttcagcatttcgaagcagttgtccgaggggcgcctgagcggctcgattatgccgtcgag
caacacggtcagcatacagccaaccaccaacttcggagacagacaacgcttctgttgctc
cttgttaattcaagtgaacgcgaaatgagaaaagcaaattgtaccacttcagttgctgct
gtagcgaaagtttccaaagaccattcacattga
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