Trichinella spiralis: Tsp_12104
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Entry
Tsp_12104 CDS
T01609
Name
(RefSeq) putative filamin/ABP280 repeat-containing domain protein
KO
K04437
filamin-A
Organism
tsp
Trichinella spiralis
Pathway
tsp04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
Tsp_12104
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tsp04812
]
Tsp_12104
04147 Exosome [BR:
tsp04147
]
Tsp_12104
Cytoskeleton proteins [BR:
tsp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
Tsp_12104
Intermediate filaments
Intermediate filament-binding proteins
Tsp_12104
Exosome [BR:
tsp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Tsp_12104
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filamin
Big_3_5
DUF3244
Motif
Other DBs
NCBI-GeneID:
10904792
NCBI-ProteinID:
XP_003375581
LinkDB
All DBs
Position
Unknown
AA seq
1483 aa
AA seq
DB search
MSLLSNRWRGGDGQPGRYMATVGLSEPCIIGSLVEILITPKDVTEGMILVEAISPTDRII
DCSVRRRSNVYKAKFVPDEIGEWKVCITYEDVHIQGSPFSCLVYNPNNAKVSGPETAVIG
QEVRYTINTEEAGPGDATVKVCHERMLVPVMFERIDRGYYVARFVPEENGSYSVQVFLNG
IPLKGSPFLLDVVDASSVKAYGSGLRTANVGHLATFHVAAESVEAKEIAVVVTAPSGKKK
RARLFPGDEDDVYRVEWKPVETGKHYIDLRVHNQSVKSSPYSCDVGDPELVTVRNLPKQI
KQSELGSPVTFTIDASTAGSGNLEIMINDGRVHCRVRDLGQRIYLATFVPVQPTAHVVQM
TFNGSAVKGSPWVLDLARPAPVDQHQQSPLGLPLGNVLLAAPVSLEQLNTGAVVSGYACL
ASPGGVRTIVQPATALTADQLKVSSTAQTTTSAGQNATTPIWADIHGRGLQTACVGKTAN
FEVTAPALTKRDVFVKIISMDGAEVPCLVTETEAGHFLCEYVPAEVGLVRVDIALAGQAV
DKSPFLVSVYDPNRVRIEPIAGGVIGQPVQFVIDAREAGKGQLEIAINQGRVPNGVQLQD
PGQCLVTFIPDSAGVYLIDVTLNGDTVRGCPMRVEFSDSTSPSIPPPPPPPPLPSQAWTA
SRHPTDRMPHVSKVHQPSPLVSYQTSASTAARSPLVSSELRRTVDSTTNGNLRFLSRQSS
KDNDHRVTVKRSVETYFTSSSSSGGGGGRPMASGDDDNDSDRLSSSRVSSGGDLTKRFVD
IVDTRDRHAAVVGRVRSDDDEQQRCAAAAVVSQCRRFDDELKSPLNKAISPTLTKSATNE
QQHSAAGDETISPAIAASVGRIYSSSLSSSTTATVPGEPISPKQVTEKAEPIYSNIEQPD
SVEESENYHNETIIGLLQEEGAKVAGCKKSTDVVDAGVIRYDRPPSNLQDVVDQSDLAGS
VEFASPTNHLPPRNFASQPLVSVLTYRDDFDVLDDHGAGIDLLSSANHSKLDFVSWNRTR
IVGPEQNILRLTRTAHYWITPRFGDEKQNLKVTITLFNPDKVIISNIEAGSVDEPAQFTV
DATHAGHGDLEIAIKDPKDQTVPSKVMSQNGHANFKVSFVPQCAGSHGIHVTFNGEKVAG
SPFMCTVMEEACDVVVLSSASSPTGEQRQQPLPATLTAARSLLAAVVSSSVPKLAPVRRP
TTVQVSTDTQDLKLQATVTAPDGKVLDNCNVVNKELGLYVLEIVPSVVGEYQVELKTGGR
QISGSPFSFRAYDPAKIIVSPMTDGAVNKAVHFVVDASDAGVGNLEVAVNEGNIPSMAQN
LGHHRYDISFVPAEPIVHTVSIRFNGDHVPDPTGNVLPISVDNPGNGARQVSFTPLVVGV
HRIAVKYANQHIHGSPFTAKAYDAAQVKLYGLDSSVVVGQPTNFVIDAGKAGAGNMEIVI
SVDGRNLPNHVQAEGNAKFRVSFTPQESKVHLISVRFNDEPVS
NT seq
4450 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgttgagtaaccgctggcgtggtggcgacggccaacctggccgttacatggcc
accgtcggcttgtcggaaccttgcattattggatctttggttgaaattttgattacaccg
aaagatgtgacagaagggatgattcttgtcgaagcaatttcgccgaccgatcgcataatt
gattgttctgttcgaagacgatcgaacgtttacaaagcgaaatttgttcccgacgaaatt
ggcgaatggaaagtatgcattacctatgaagatgtgcacattcagggaagtccattttcg
tgtttggtatacaatccgaacaatgcgaaagtttctggccctgagactgccgtaattgga
caggaagtgcgttacacgatcaataccgaagaagctggtcctggagatgctactgtaaaa
gtatgccatgaaaggatgctcgtacctgttatgttcgagagaattgacagaggctattat
gtagcccgttttgtacccgaagaaaacggttcatacagtgtgcaagtgtttctcaacggt
attccactgaaaggctcaccatttctgttggatgtggtcgatgctagcagtgtgaaagct
tacggctctggtttgcgtacagctaacgtgggccatttggccacttttcacgtagctgca
gaaagcgtggaagcgaaagaaattgccgtcgtcgttactgccccttctggaaagaaaaag
cgggctcgcctgtttccaggagacgaagacgatgtttaccgtgtagagtggaaaccagtc
gaaactggcaagcattacatcgacttgcgtgtgcacaatcagagcgtgaaaagcagcccg
tatagctgcgacgttggcgatccagaattggtcactgtgcgcaatttgcccaaacaaatt
aaacaatccgaactgggcagcccggtcactttcaccatcgacgcatccacagccggaagt
ggcaatttggaaattatgatcaacgacggtcgggttcattgtcgtgttcgcgatttggga
cagagaatctacttggccacgttcgttcccgtgcagccgactgcccatgtagtgcaaatg
acgttcaacggttccgcagttaaaggaagcccttgggtgttggatttggcacgcccggcg
ccggtcgatcagcatcaacagtcgccgctcggtttgccgttgggaaatgtgctgttggcg
gcgcccgtgagcttggaacagctcaacactggggctgtggtttctggatacgcttgtctg
gccagtcccggcggtgtgcggaccattgttcaaccggcgaccgctttgactgcagatcag
ttgaaagtttcttcgacagcgcagacaacaacatctgctggtcaaaatgcgacaacgccc
atttgggcggacattcacggtcgtggtctgcagaccgcatgcgtgggcaagacggccaat
ttcgaagtgaccgccccggcgttgactaagcgcgacgtgttcgtcaaaataatcagtatg
gacggagccgaagtgccgtgcttggtgaccgaaactgaagctggtcattttctttgcgaa
tacgtcccagcagaagttggcttggttcgcgtcgacatcgctctggctggccaagcagtg
gacaagagtccatttttggtgtccgtctacgatccgaaccgcgttcgcatagagccaatc
gccggcggtgtgattggtcagcctgtgcaatttgtcatcgacgcccgagaagcgggaaag
gggcagttggaaattgcgatcaaccaaggtcgagttcctaacggtgttcagttgcaagat
cctggccagtgtttggtcacttttatcccagactcagccggcgtctacttgatcgacgtc
actttgaacggcgacaccgttcggggctgcccaatgcgagtggaattcagcgattcgacg
tcgccgtcaatacctccaccgcccccacctccaccgttaccatctcaagcttggaccgct
tctcgacatccgaccgatcggatgccgcacgtttcgaaagttcaccaaccgtcgccgttg
gtcagctatcaaacttccgcatctacagccgctagatcgccgttggtcagcagtgaattg
agacgaactgtcgactccaccacgaatggcaatttgagatttttgtccagacaatcttca
aaggacaacgatcaccgcgtgacggtcaaacgttcagttgaaacttacttcacaagcagc
agcagcagcggcggcggcggcggtagaccaatggcatctggtgatgatgataatgatagt
gaccgcttgtcgtcatcaagggtcagcagcggtggcgatttgaccaagcgattcgtcgat
attgttgatacaagagatcggcatgctgctgttgttggtcgtgtcaggagtgatgatgac
gagcaacaacgttgtgctgctgctgctgtcgttagccagtgccggcggttcgacgacgag
cttaagtcaccgttgaacaaggcgatttcaccgaccctgaccaaatccgcgaccaacgaa
cagcagcattcagcagcaggcgacgaaactatttccccggctattgctgccagcgttggt
agaatatactcgtcatcattatcatcatcaacaacagcaacagtaccaggcgaaccaatt
tcgcccaaacaagtgaccgaaaaagccgaaccaatatacagcaacattgaacagccagat
tctgttgaagagagtgaaaattatcataacgagacgatcattggtttgctgcaagaagaa
ggtgcaaaagttgccggttgcaaaaaatcgacagacgtcgtcgatgccggtgtgattcgt
tacgatcgtccgccgtcgaacttgcaggatgttgtcgatcagtcggatcttgcaggatcg
gttgaattcgcttctccaaccaatcacttaccacctcgaaattttgcttcccaacctctg
gtgtccgttttaacataccgagatgattttgacgttctggacgaccacggcgccggaatc
gacctcctgtcctcagccaatcacagcaagctcgactttgtcagctggaatcgtacccgc
atcgtcggtcctgaacaaaatatactacgtctgaccagaaccgcacactactggatcact
cctcgattcggcgacgagaagcaaaatttgaaagtcaccatcactctgttcaatccggac
aaagtgattatcagcaacatcgaagctggatcagttgatgagccggctcaatttacagtt
gatgcaacacatgctggtcatggtgatttggaaattgcaatcaaagatccaaaagatcaa
accgtgccgagcaaggtgatgagccagaatggtcatgccaatttcaaagtatcctttgta
ccccagtgcgccggttctcacggtattcacgtcacattcaacggtgaaaaagtagctgga
agtccatttatgtgcaccgtgatggaagaagcgtgcgatgttgttgtactttcgtctgct
tcttcacctactggagagcaacgccaacagccgctgcctgctacactcacggcagccagg
agtctgcttgctgcggttgtttccagttccgtgccaaagctggcacctgtacgcagacca
acgacggttcaagtgtcaacggatactcaagatttgaaattgcaagcaactgtcacagca
cctgatggtaaagtgttggacaattgtaacgttgttaataaagaattgggtctttacgtg
ttggagattgtccctagtgttgttggcgaatatcaagttgaattgaagacaggagggcgt
caaatttcgggaagtccattttcatttcgggcttacgatcctgccaaaatcattgtcagt
ccaatgaccgacggagcagttaacaaagctgttcattttgtcgtagacgccagtgatgct
ggagtgggaaatttggaagtggccgtcaacgaaggaaacattccttcaatggcgcaaaat
ttgggccatcatcgttacgacatttcatttgtaccggctgaaccaatagttcacacagtt
agcatacgattcaacggcgatcatgtgccggatccaacgggaaatgtgttaccgatcagt
gttgataatccaggaaatggagcacgtcaagtgagctttactcctcttgtagttggtgtg
cataggattgcagtaaaatatgcaaatcagcatatacatggttcacctttcactgctaaa
gcgtacgatgctgctcaggtgaaactgtacggtctggacagttctgttgtagtcggacaa
ccgaccaattttgtcattgacgctggaaaagccggagcaggaaatatggaaattgtcata
tcggttgatggtcgaaacttgccaaaccatgtccaagcagaaggcaacgcgaaatttcgc
gtatcgttcacgccacaggaatcgaaagtacatttgatcagtgtccgattcaacgacgag
ccagtgtcag
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integrated database retrieval system
